New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5499350	40 (0.740)	4 (0.080)	4/254	NT	8.7%	coding (128/720 nt)	cobK	precorrin‑6x reductase
	?	NC_002947	= 5499391	46 (0.890)					coding (169/720 nt)	cobK	precorrin‑6x reductase

TGGGAGGGGTCACTGAAGCCCTGGCGATGGCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGCCTGGCAGGCGCAAGCAG  >  NC_002947/5499245‑5499535                                                                                                                                                   |                                                                                                                                                 tGGGAGGGGTCACTGAAGCCCTGGCGATGGCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTac                                                                                                                                                <  2:76159‑M2/149‑3 (MQ=255)      ggggTCACTGAAGCCCTGGCGATGGCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTgcg                                                                                                                                           <  1:166037/149‑1 (MQ=255)       gggTCACTGAAGCCCTGGCGATGGCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCGAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTgcgc                                                                                                                                          <  2:93084/149‑1 (MQ=255)                aaGCCCTGGCGATGGCCCGCCAACTCGGGCCTCGACATGTCTACAGCGTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCgg                                                                                                                                   <  7:64011/147‑1 (MQ=255)                   cccTGGCGATGGCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCACGGCTTCCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCATGACCCGTTACCTGCGCGAAGCCGACAt                                                                                                                               >  6:158414/1‑148 (MQ=255)                     cTGGCGATGGCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCAc                                                                                                                            >  6:251208/1‑149 (MQ=255)                        gCGATGGCCCGCCAACTCGGGCCTCGACATGTATACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATAACCct                                                                                                                         >  8:57099/1‑149 (MQ=255)                         cGATGGCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCctg                                                                                                                        >  8:171850/1‑149 (MQ=255)                          gATGGCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCctgc                                                                                                                       <  6:4911/149‑1 (MQ=255)                             ggCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGa                                                                                                                    >  5:297117/1‑149 (MQ=255)                              gCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGAt                                                                                                                   <  7:171850/149‑1 (MQ=255)                              gCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGAt                                                                                                                   <  1:91905/149‑1 (MQ=255)                              gCCCGCCAACTCGGGCCTCGACATGTCTACACCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGAt                                                                                                                   <  8:107892/149‑1 (MQ=255)                                ccGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATc                                                                                                                  >  1:200191/1‑148 (MQ=255)                                ccGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATc                                                                                                                  >  5:152933/1‑148 (MQ=255)                                   ccAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGTCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACg                                                                                                              <  1:76159/149‑1 (MQ=255)                                                   aaTGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGTGCTTGCAATGCCAGGTGCGGGTCGGGGGGTATGGCGGTGTCGAGGGCCTTACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGc                                                                                              <  5:197008/148‑1 (MQ=255)                                                      gTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTacctg                                                                                                                                             <  4:191042‑M2/99‑6 (MQ=255)                                                      gTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTacctg                                                                                                                                             >  3:191042‑M2/1‑94 (MQ=255)                                                      gTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCcgc                                                                                           >  2:81663/1‑149 (MQ=255)                                                                  gCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCg                                                                               <  1:81663/149‑1 (MQ=255)                                                                  gCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCg                                                                               >  5:312964/1‑149 (MQ=255)                                                                   ccGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAAt                                                                                     <  2:294315/142‑1 (MQ=255)                                                                   ccGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAAt                                                                                     >  1:294315/1‑142 (MQ=255)                                                                    cGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGc                                                                              >  7:260742/1‑148 (MQ=255)                                                                     ggTATCGGCCGCGTGCCCAAGTGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCTGGCATCACCCTGCTGATCGACGACACCCACCCCTATGCCGCGCAAATCAGCCGCaa                                                                            >  6:275629/1‑149 (MQ=255)                                                                             ccGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCCCCCACCCCTATGCCGCGCAAATCAGCCGCAATgccgc                                                                      >  7:226437/1‑147 (MQ=255)                                                                              cgcgTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAg                                                                   >  6:72030/1‑149 (MQ=255)                                                                                      ccAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCcgcac                                                           <  8:260742/149‑1 (MQ=255)                                                                                        aGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCTAGCGCcgcacg                                                          >  2:230041/1‑148 (MQ=255)                                                                                             ttGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGc                                                    >  1:153145/1‑149 (MQ=255)                                                                                               gCAATGCCATGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTTCCTGCGCGAAGCTGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGcc                                                   <  5:324641/148‑1 (MQ=255)                                                                                                cAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTacctggcattgcaagccctggggcacgcggccgataccggccaggctgtagacatgtcgaggcccgagttggcgggccatcgccagggcttcagtga                                                 <  1:60127‑M2/149‑98 (MQ=255)                                                                                                cAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCg                                                  <  6:152933/148‑1 (MQ=255)                                                                                                cAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCg                                                  <  5:72030/148‑1 (MQ=255)                                                                                                 aaTGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTacctggcattgcaagccctggggcacgcggccgataccggccaggctgtagacatgtcgaggcccgagttggcgggc                                                                     <  6:158735‑M2/128‑78 (MQ=255)                                                                                                 aaTGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTacctggcattgcaagccctggggcacgcggccgataccggccaggctgtagacatgtcgaggcccgagttggcgggc                                                                     >  5:158735‑M2/1‑51 (MQ=255)                                                                                                   tGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTacctggcattgcaagccctggggcacgcggccgataccggccaggctgtagacatgtcgaggcccgagttggcgggccatcgccagggcttcagtgaccc                                              <  1:116678‑M2/149‑101 (MQ=255)                                                                                                     ccAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATc                                             <  6:297117/148‑1 (MQ=255)                                                                                                      cAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATccc                                           >  2:256855/1‑149 (MQ=255)                                                                                                                   ggggCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTg                              >  6:310154/1‑149 (MQ=255)                                                                                                                    gggCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGc                             >  1:135334/1‑149 (MQ=255)                                                                                                                     ggCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCCCGCACCGCCGGCATCCCGTGCTGGGCCTTGcg                            >  8:72912/1‑149 (MQ=255)                                                                                                                       cTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGcgtc                          <  5:251208/149‑1 (MQ=255)                                                                                                                        tATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGcgtcg                         >  2:90124/1‑149 (MQ=255)                                                                                                                              ggTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCTCCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGc                   <  5:275629/149‑1 (MQ=255)                                                                                                                                tgtCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCACCCGCAATGCCGCCAGCGCCCCACGCAACGCCGGCATCCCGTCATGGGCCTTGCGTCGTCCCGCCt                 >  8:283800/1‑149 (MQ=255)                                                                                                                                  tCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGCCTgg               >  1:215342/1‑149 (MQ=255)                                                                                                                                    gAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGCCTgg               >  1:123373/1‑147 (MQ=255)                                                                                                                                       ggCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGTCGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGCCTGGCAGgc          <  1:171985/149‑1 (MQ=255)                                                                                                                                       ggCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGCCTGGCAGgc          >  2:59330/1‑149 (MQ=255)                                                                                                                                          cTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGCCTGGCAGgcgc        >  8:90530/1‑148 (MQ=255)                                                                                                                                           tGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTCATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGCCTGGCAGgcgc        >  1:137529/1‑147 (MQ=255)                                                                                                                                              cccGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGCCTgg               >  7:9781/1‑137 (MQ=255)                                                                                                                                              cccGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGCCTgg               <  8:9781/137‑1 (MQ=255)                                                                                                                                               ccGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCCACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGCCTGGCAGGCGCAAGCAg  <  1:90124/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 TGGGAGGGGTCACTGAAGCCCTGGCGATGGCCCGCCAACTCGGGCCTCGACATGTCTACAGCCTGGCCGGTATCGGCCGCGTGCCCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACGCAACGCCGGCATCCCGTGCTGGGCCTTGCGTCGTCCCGCCTGGCAGGCGCAAGCAG  >  NC_002947/5499245‑5499535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.