New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5990819 =	64 (1.190)	3 (0.060)	3/240	NT	5.1%	intergenic (‑153/‑76)	ycaC‑III/PP_5249	putative hydrolase/LysR family transcriptional regulator
	?	NC_002947	5990863 =	53 (1.080)					intergenic (‑197/‑32)	ycaC‑III/PP_5249	putative hydrolase/LysR family transcriptional regulator

CGTTGATGGGCACAGATTAAAATCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCAAAACTCAGCCGGCGAATCGCCG  >  NC_002947/5990717‑5991009                                                                                                                                                   |                                                                                                                                                   cgTTGATGGGCACAGATTAAAATCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTa                                                                                                                                                  >  7:204598/1‑149 (MQ=255)  gTTGATGGGCACAGATTAAAATCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTa                                                                                                                                                  >  5:98010/1‑148 (MQ=255)     gttGGGCTCTGATTAAATTGATCTCCTTTGCGGCGGTTGTTAGGAGAATCTGGGTTTTGCGTTCTGATTTATGTACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGAGGCTAATGCCGCTCCTACGAGCGAAGATGCCGGTACAg                                                                                                                                               <  4:306908/146‑1 (MQ=255)     gATGGGCACAGATTAAAATCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAgg                                                                                                                                              >  4:24770/1‑149 (MQ=255)        gggCACAGATTAAAATCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCaa                                                                                                                                           >  4:166864/1‑149 (MQ=255)         ggCACAGATTAAAATCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGAGTTGTAGGAGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCATACGAGCGAAGAGTCCGGTACAGGCAAc                                                                                                                                          >  7:213952/1‑149 (MQ=255)          gCACAGATTAAAATCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAAcc                                                                                                                                         >  5:315447/1‑149 (MQ=255)           cacaGATTAAAATCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAAccc                                                                                                                                        <  6:98010/149‑1 (MQ=255)             caGATTAAAATCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCaa                                                                                                                                      <  1:328553/149‑1 (MQ=255)                 ttAAAATCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATAcc                                                                                                                                  >  6:100051/1‑149 (MQ=255)                  tAAAATCATCCCCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGCCTGTGTCGGCCTCTTCGCGGCTTACGCCGCTCCTAGGAGCGAAGAGGCCGGTACAGGCAACCCAATAcac                                                                                                                                 >  7:296431/1‑147 (MQ=255)                  tAAAACCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATAccc                                                                                                                                 >  8:106264/1‑149 (MQ=255)                    aaaTCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCTGTACAGGCAACCCAATACCCg                                                                                                                                >  3:296192/1‑148 (MQ=255)                    aaaTCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCg                                                                                                                                >  2:96075/1‑148 (MQ=255)                    aaaTCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCg                                                                                                                                <  5:84671/148‑1 (MQ=255)                    aaaTCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCg                                                                                                                                <  6:119044/148‑1 (MQ=255)                         atcaCCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGAcc                                                                                                                          >  8:81729/1‑149 (MQ=255)                          tcaCCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGAcc                                                                                                                          >  5:150896/1‑148 (MQ=255)                             ccTTTCCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGAt                                                                                                                       >  1:164689/1‑148 (MQ=255)                              cTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCa                                                                                                                     >  1:145034/1‑149 (MQ=255)                                 tGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGCTGGATTTGTAGGGGCTGTGGCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCAtt                                                                                                                   <  6:86258/148‑1 (MQ=255)                                 tGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCAtt                                                                                                                   <  4:296192/148‑1 (MQ=255)                                 tGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCAt                                                                                                                    <  7:81729/147‑1 (MQ=255)                                   cggcggTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTgg                                                                                                                 <  6:315447/148‑1 (MQ=255)                                    ggcggTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGaa                                                                                                               <  8:204598/149‑1 (MQ=255)                                    ggcggTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGaa                                                                                                               <  6:227780/149‑1 (MQ=255)                                      cggTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGa                                                                                                             >  5:127788/1‑149 (MQ=255)                                               gCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTc                                                                                                    >  2:232734/1‑149 (MQ=255)                                                cAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTcc                                                                                                   <  6:150896/149‑1 (MQ=255)                                                    aTCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCctc                                                                                                <  1:96075/148‑1 (MQ=255)                                                             tAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCa                                                                                      >  5:56183/1‑149 (MQ=255)                                                              aGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCa                                                                                      <  6:172157/148‑1 (MQ=255)                                                                 gTTCTGA‑TTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCACCCCAATACCCGGAGACCGATCATTGGAAGACCTCCACTCCCTCTACTACTTCACCCAg                                                                                 >  2:124713/1‑149 (MQ=255)                                                                  ttCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAg                                                                                 <  1:232734/149‑1 (MQ=255)                                                                        tttATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGgtcgtc                                                                           <  2:164689/149‑1 (MQ=255)                                                                             gAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACa                                                                      >  2:269909/1‑149 (MQ=255)                                                                              aaCGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTccc                                                                                                  >  5:155475/1‑120 (MQ=255)                                                                              aaCGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTccc                                                                                                  <  6:155475/120‑1 (MQ=255)                                                                                cGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATgg                                                                   <  7:106264/149‑1 (MQ=255)                                                                                 gATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACGCGGAGACCGATCATAGGAAGACCTCTACTCCCTCTACTACTTCACCCAGGTCGTCGAACATggc                                                                  >  5:77341/1‑149 (MQ=255)                                                                                 gATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATggc                                                                  >  1:335834/1‑149 (MQ=255)                                                                                  aTGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGgtcgtc                                                                           <  5:33919/139‑1 (MQ=255)                                                                                      aTTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACATCACCCAGGTCGTCGAACATGGCGGCt                                                              >  4:271205/1‑148 (MQ=255)                                                                                       tttGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCCACTCCCTCTACTACTTCCCCCAGGTCGTCGCACATGGCGGCTTc                                                            >  4:31887/1‑149 (MQ=255)                                                                                       tttGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTc                                                            >  2:33419/1‑149 (MQ=255)                                                                                           tAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGccc                                                        >  6:87808/1‑149 (MQ=255)                                                                                               ggCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCccggc                                                    <  3:221783/149‑1 (MQ=255)                                                                                                    tgtCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCcgggc                                               <  5:100051/149‑1 (MQ=255)                                                                                                    tgtCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCcgggc                                               <  2:335834/149‑1 (MQ=255)                                                                                                       cggcctcttcgctcgtaggagcggctttagccgcgaagaggccgGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCGCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCcgggcggg                                            >  3:173906‑M2/45‑149 (MQ=255)                                                                                                        GGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCcgggcggg                                            >  3:24770‑M1/1‑148 (MQ=255)                                                                                                          CCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGgcgc                                         <  1:215443‑M1/149‑1 (MQ=255)                                                                                                           CTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCt                                        <  3:159489‑M1/149‑1 (MQ=255)                                                                                                              ttcgctcgtaggagcggctttagccgcgaagaggccgGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGgtc                                                                              <  1:337987‑M2/71‑1 (MQ=255)                                                                                                              ttcgctcgtaggagcggctttagccgcgaagaggccgGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGgtc                                                                              >  2:337987‑M2/38‑108 (MQ=255)                                                                                                              TTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTg                                       >  1:220106‑M1/1‑147 (MQ=255)                                                                                                              TTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGa                                     <  7:167363‑M1/149‑1 (MQ=255)                                                                                                              TTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGa                                     <  6:11411‑M1/149‑1 (MQ=255)                                                                                                                   ggCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGc                                <  2:145034/149‑1 (MQ=255)                                                                                                                        aaGCCTCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCa                             <  3:308993/147‑1 (MQ=255)                                                                                                                          gCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTctac                                                                                             <  3:235927/81‑1 (MQ=255)                                                                                                                          gCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTctac                                                                                             >  4:235927/1‑81 (MQ=255)                                                                                                                            cGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCa                        >  4:84882/1‑148 (MQ=255)                                                                                                                             gCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCaa                       >  7:145355/1‑148 (MQ=255)                                                                                                                                  tACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGt                          <  3:256685/140‑1 (MQ=255)                                                                                                                                  tACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACATCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGt                          >  4:256685/1‑140 (MQ=255)                                                                                                                                    cGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCAAAACTCAGc               <  5:87808/149‑1 (MQ=255)                                                                                                                                     gAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCAAAACTCAGcc              >  4:148975/1‑149 (MQ=255)                                                                                                                                     gAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCAAAACTCAGcc              >  5:203235/1‑149 (MQ=255)                                                                                                                                       gcgaagaggccgGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCAAAACTCAGCCgg            >  3:231332‑M2/13‑149 (MQ=255)                                                                                                                                       gcgaagaggccgGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCAAAACTCAGCCgg            >  7:235269‑M2/13‑149 (MQ=255)                                                                                                                                        cgaagaggccgGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCAAAACTCAGCCGGc           >  4:25026‑M2/12‑149 (MQ=255)                                                                                                                                          aagaggccgGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGa                                     <  2:47923‑M2/112‑1 (MQ=255)                                                                                                                                          aagaggccgGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGa                                     >  1:47923‑M2/10‑121 (MQ=255)                                                                                                                                               gccgGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCAAAACTCAGCCGGCGAATCGc    >  4:245856‑M2/5‑149 (MQ=255)                                                                                                                                                ccgGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCAAAACTCAGCCGGCGAATCGcc   <  3:25026‑M2/146‑1 (MQ=255)                                                                                                                                                 cgGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCAAAACTCAGCCGGCGAATCGCCg  >  2:278874‑M2/3‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                   CGTTGATGGGCACAGATTAAAATCATCACCTTTGCGGCGGTAGTTAGCAGAATCTGGCTTTAGCGTTCTGATTTATGAACGATGGATTTGTAGGGGCTGTGTCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGCGAAGAGGCCGGTACAGGCAACCCAATACCCGGAGACCGATCATTGGAAGACCTCAACTCCCTCTACTACTTCACCCAGGTCGTCGAACATGGCGGCTTCGCCCCGGCCGGGCGGGCGCTGGACATGCCCAAGTCAAAACTCAGCCGGCGAATCGCCG  >  NC_002947/5990717‑5991009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.