| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 850,092 | Δ2,855 bp | [rhtA]–[mntS] | [rhtA], ompX, opgE, [mntS] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 850092 | 852946 | 2855 | 109 [0] | [0] 109 | [rhtA]–[mntS] | [rhtA], ompX, opgE, [mntS] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 850091 | 0 (0.000) | 109 (1.170) | 89/298 | 0.0 | 100% | coding (7/888 nt) | rhtA | threonine and homoserine efflux system |
| ? | NC_000913 | 852947 = | 0 (0.000) | coding (51/129 nt) | mntS | Mn(2)‑response protein, MntR‑repressed | |||||
Only 100 of 109 total aligned reads displayed.
TCCTAATGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCAGGCATCCTTTCTCCCACAAATATCTAGACTTAAGTAAAGCGTGGAGTGTACTGGATATACCCAATGCTGGTTGAGCATTTGTTGAAAAAATTTTCCCCCGTTTTGACTAAAATGCGCCAGGATTGATGGAATCATTAGTCTGGTGAT > NC_000913/849945‑850239 | tCCTAATGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCttt > 2:1271210‑M1/1‑147 (MQ=255) ccTAATGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCttta < 2:117245‑M1/150‑5 (MQ=255) cTAATGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaa > 1:325550‑M1/1‑145 (MQ=255) tAATGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaa > 2:1125512‑M1/1‑144 (MQ=255) aaTGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagg > 2:592251‑M1/1‑143 (MQ=255) aTGCCAGACGCAGCGCAGTGACGCCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaaggg < 2:727340‑M1/151‑10 (MQ=255) aTGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaaggg > 2:487897‑M1/1‑142 (MQ=255) gCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggag < 1:392284‑M1/151‑12 (MQ=255) gCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggag < 2:803994‑M1/151‑12 (MQ=255) cAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaa < 1:401885‑M1/151‑14 (MQ=255) gACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatg < 2:622763‑M1/151‑16 (MQ=255) gACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatg > 2:421801‑M1/1‑136 (MQ=255) cgcagcgcagTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgac > 1:1199263‑M1/1‑134 (MQ=255) gcagcgcagTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgact < 1:896910‑M1/151‑19 (MQ=255) cagcgcagTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgacta < 2:936623‑M1/151‑20 (MQ=255) agcgcagTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgacta > 1:967731‑M1/1‑131 (MQ=255) agcgcagTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgacta > 2:1034491‑M1/1‑131 (MQ=255) gcgcagTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaa < 2:707141‑M1/151‑22 (MQ=255) cgcagTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaac > 2:1313637‑M1/1‑129 (MQ=255) gcagTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaac > 2:1465982‑M1/1‑128 (MQ=255) gACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgc < 2:577517‑M1/151‑29 (MQ=255) cacCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcat < 1:727083‑M1/151‑31 (MQ=255) cacCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcat < 2:1312913‑M1/151‑31 (MQ=255) gTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAGCCtttaaagggagaatgactaaacacgcgcatacacct < 2:24247‑M1/151‑37 (MQ=255) gcgcCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctct > 2:263436‑M1/1‑113 (MQ=255) gcgcCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctct > 2:894790‑M1/1‑113 (MQ=255) cccACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttg > 1:408185‑M1/1‑110 (MQ=255) ccaccaGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaa < 2:1292328‑M1/151‑43 (MQ=255) gagGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcatt < 2:1079245‑M1/151‑49 (MQ=255) ggAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattca < 1:526491‑M1/151‑51 (MQ=255) gAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcat < 2:1189010‑M1/151‑52 (MQ=255) aaaaaGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcat > 1:1268832‑M1/1‑99 (MQ=255) aaaaGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataa < 1:809973‑M1/151‑54 (MQ=255) aaaGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcata > 2:1190209‑M1/1‑97 (MQ=255) aGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagac > 1:757022‑M1/1‑95 (MQ=255) aGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagac > 1:760240‑M1/1‑95 (MQ=255) gTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacc < 2:671709‑M1/151‑58 (MQ=255) aCTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcc < 2:733367‑M1/151‑61 (MQ=255) cTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcct > 2:1403043‑M1/1‑90 (MQ=255) ttAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctg > 2:382803‑M1/1‑89 (MQ=255) ttAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctg > 2:224245‑M1/1‑89 (MQ=255) tAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcct < 1:673297‑M1/149‑62 (MQ=255) aaCGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgc < 2:837533‑M1/151‑69 (MQ=255) aaCGAGGCTCCACACTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttg < 1:525903‑M1/150‑68 (MQ=255) gAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgcta > 2:112447‑M1/1‑80 (MQ=255) gAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgcta > 2:913832‑M1/1‑80 (MQ=255) aGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaat > 2:1239995‑M1/1‑79 (MQ=255) ggCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatc < 2:1107582‑M1/151‑74 (MQ=255) ccACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatccc < 1:1024416‑M1/149‑76 (MQ=255) ccTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgat < 2:1182208‑M1/151‑82 (MQ=255) cTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatc > 1:1053229‑M1/1‑69 (MQ=255) aaTAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatcctt > 2:738561‑M1/1‑66 (MQ=255) aaTAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatcctt < 1:332510‑M1/151‑86 (MQ=255) aTAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttg < 1:639787‑M1/151‑87 (MQ=255) tAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttg > 2:1130537‑M1/1‑64 (MQ=255) aGACGCCATGGCAACGAGCAATATGTCTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaaggtagaatgactaaacacgcgcatacacctcttgaactcattcataaaacctcctgacttgctaatcccgtcgattcgtgag < 2:334945‑M1/151‑89 (MQ=255) gACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagg < 1:1370979‑M1/151‑90 (MQ=255) aCGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgaggg < 2:863048‑M1/151‑91 (MQ=255) ccATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatg < 1:166956‑M1/151‑94 (MQ=255) ccATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatg < 2:1063338‑M1/151‑94 (MQ=255) cATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatga < 1:12605‑M1/151‑95 (MQ=255) gCAACGAGCAATATCACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacgcctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgc < 1:784241‑M1/151‑99 (MQ=255) aCGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcatt < 1:90359‑M1/151‑102 (MQ=255) cGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcatt > 2:868005‑M1/1‑49 (MQ=255) cGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcatt > 1:1297827‑M1/1‑49 (MQ=255) gCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacat < 1:962139‑M1/151‑106 (MQ=255) gCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacat < 1:421795‑M1/151‑106 (MQ=255) atatGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatac > 2:771137‑M1/1‑43 (MQ=255) atGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacag < 2:218443‑M1/150‑110 (MQ=255) atGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatac > 1:1378999‑M1/1‑41 (MQ=255) atGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatac > 2:778814‑M1/1‑41 (MQ=255) atGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatac > 2:1394084‑M1/1‑41 (MQ=255) gACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagat < 2:1198518‑M1/150‑112 (MQ=255) aCTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatat < 1:379606‑M1/151‑114 (MQ=255) aCTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatat < 1:1400785‑M1/151‑114 (MQ=255) aTTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagc > 2:927241‑M1/1‑35 (MQ=255) aTTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagc < 2:1132297‑M1/151‑117 (MQ=255) tGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcac > 1:314679‑M1/1‑33 (MQ=255) tAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacagg > 2:1106182‑M1/1‑30 (MQ=255) aaCCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacagg < 2:863002‑M1/150‑122 (MQ=255) ccAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggcta < 2:442079‑M1/151‑125 (MQ=255) ccAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggcta < 1:1178103‑M1/151‑125 (MQ=255) ccAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggcta < 2:1439301‑M1/151‑125 (MQ=255) ccAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggct > 1:332692‑M1/1‑27 (MQ=255) gCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatat < 1:1156964‑M1/151‑133 (MQ=255) cATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatata < 1:992503‑M1/151‑134 (MQ=255) aTTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatag < 2:23172‑M1/151‑135 (MQ=255) tttACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagct > 2:381729‑M1/1‑15 (MQ=255) tttACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagc < 2:300991‑M1/150‑136 (MQ=255) ttACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagct < 2:1439689‑M1/150‑137 (MQ=255) ttACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagct < 1:487893‑M1/150‑137 (MQ=255) aCGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctatt > 2:1404102‑M1/1‑12 (MQ=255) gTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgc > 1:483070‑M1/1‑10 (MQ=255) aaTGAACCtttaaagggagaatgactaaatacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgct < 2:627190‑M1/150‑143 (MQ=255) aaTGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgcta < 1:523609‑M1/151‑144 (MQ=255) aaTGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgct < 1:709608‑M1/150‑143 (MQ=255) tGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgctaa > 1:89410‑M1/1‑6 (MQ=255) gAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgctaaaa < 2:1266600‑M1/151‑147 (MQ=255) gAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgctaaa < 1:1190201‑M1/150‑146 (MQ=255) aCCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgctaaaacg > 1:1161376‑M1/1‑3 (MQ=255) | TCCTAATGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCAGGCATCCTTTCTCCCACAAATATCTAGACTTAAGTAAAGCGTGGAGTGTACTGGATATACCCAATGCTGGTTGAGCATTTGTTGAAAAAATTTTCCCCCGTTTTGACTAAAATGCGCCAGGATTGATGGAATCATTAGTCTGGTGAT > NC_000913/849945‑850239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |