| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 850,092 | Δ2,855 bp | [rhtA]–[mntS] | [rhtA], ompX, opgE, [mntS] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 850092 | 852946 | 2855 | 109 [0] | [0] 109 | [rhtA]–[mntS] | [rhtA], ompX, opgE, [mntS] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 850091 | 0 (0.000) | 109 (1.170) | 89/298 | 0.0 | 100% | coding (7/888 nt) | rhtA | threonine and homoserine efflux system |
| ? | NC_000913 | 852947 = | 0 (0.000) | coding (51/129 nt) | mntS | Mn(2)‑response protein, MntR‑repressed | |||||
Only 100 of 109 total aligned reads displayed.
GGGGTTTTTCAGACCAAAACGCGTTATGCCTGCATGAAAGCAGGAGTGAAGCGGCGTACCGCGACGCCGCTATTTATCGGAAGGTTTATCTTGCTGCGGTTTGTTGTTGACCATATCGCACAACATAGAGAGCAGCATTAACCGTACTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTAAAACG > NC_000913/852800‑853094 | tcctaatgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccttt > 2:1271210‑M2/148‑150 (MQ=255) cctaatgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTa < 2:117245‑M2/4‑1 (MQ=255) ctaatgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTaa > 1:325550‑M2/146‑150 (MQ=255) taatgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTaa > 2:1125512‑M2/145‑149 (MQ=255) aatgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAgg > 2:592251‑M2/144‑151 (MQ=255) atgccagacgcagcgcagtgacgcccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAggg < 2:727340‑M2/9‑1 (MQ=255) atgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAggg > 2:487897‑M2/143‑151 (MQ=255) gccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGgag < 1:392284‑M2/11‑1 (MQ=255) gccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGgag < 2:803994‑M2/11‑1 (MQ=255) cagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGaa < 1:401885‑M2/13‑1 (MQ=255) gacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATg < 2:622763‑M2/15‑1 (MQ=255) gacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATg > 2:421801‑M2/137‑151 (MQ=255) cgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGAc > 1:1199263‑M2/135‑151 (MQ=255) gcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACt < 1:896910‑M2/18‑1 (MQ=255) cagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTa < 2:936623‑M2/19‑1 (MQ=255) agcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTa > 1:967731‑M2/132‑150 (MQ=255) agcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTa > 2:1034491‑M2/132‑150 (MQ=255) gcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTaaa < 2:707141‑M2/21‑1 (MQ=255) cgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAac > 2:1313637‑M2/130‑151 (MQ=255) gcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAac > 2:1465982‑M2/129‑150 (MQ=255) gacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACgcgc < 2:577517‑M2/28‑1 (MQ=255) cacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCAt < 1:727083‑M2/30‑1 (MQ=255) cacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCAt < 2:1312913‑M2/30‑1 (MQ=255) gtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgagccTTTAAAGGGAGAATGACTAAACACGCGCATACACct < 2:24247‑M2/36‑1 (MQ=255) gcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACctct > 2:263436‑M2/114‑151 (MQ=255) gcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACctct > 2:894790‑M2/114‑151 (MQ=255) cccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTg > 1:408185‑M2/111‑150 (MQ=255) ccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGaa < 2:1292328‑M2/42‑1 (MQ=255) gaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACtcatt < 2:1079245‑M2/48‑1 (MQ=255) ggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACtcattca < 1:526491‑M2/50‑1 (MQ=255) gaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACtcattcat < 2:1189010‑M2/51‑1 (MQ=255) aaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACtcattcat > 1:1268832‑M2/100‑150 (MQ=255) aaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATaa < 1:809973‑M2/53‑1 (MQ=255) aaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATa > 2:1190209‑M2/98‑149 (MQ=255) agtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGAc > 1:757022‑M2/96‑151 (MQ=255) agtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGAc > 1:760240‑M2/96‑151 (MQ=255) gtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGAcc < 2:671709‑M2/57‑1 (MQ=255) acttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGAcctcc < 2:733367‑M2/60‑1 (MQ=255) cttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGAcctcct > 2:1403043‑M2/91‑151 (MQ=255) ttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTg > 2:382803‑M2/90‑151 (MQ=255) ttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTg > 2:224245‑M2/90‑151 (MQ=255) tagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGAcctcct < 1:673297‑M2/61‑1 (MQ=255) aacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGc < 2:837533‑M2/68‑1 (MQ=255) aacgaggctccacactgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTg < 1:525903‑M2/67‑1 (MQ=255) gaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTa > 2:112447‑M2/81‑150 (MQ=255) gaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTa > 2:913832‑M2/81‑150 (MQ=255) aggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAAt > 2:1239995‑M2/80‑151 (MQ=255) ggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATc < 2:1107582‑M2/73‑1 (MQ=255) ccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATccc < 1:1024416‑M2/75‑1 (MQ=255) cctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGAt < 2:1182208‑M2/81‑1 (MQ=255) ctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATc > 1:1053229‑M2/70‑151 (MQ=255) aatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCtt > 2:738561‑M2/67‑151 (MQ=255) aatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCtt < 1:332510‑M2/85‑1 (MQ=255) atagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTg < 1:639787‑M2/86‑1 (MQ=255) tagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTg > 2:1130537‑M2/65‑150 (MQ=255) agacgccatggcaacgagcaatatgtctattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGTAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAAACCTCCTGACTTGCTAATCCCGTCGATTCGTGAg < 2:334945‑M2/88‑1 (MQ=255) gacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAgg < 1:1370979‑M2/89‑1 (MQ=255) acgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAggg < 2:863048‑M2/90‑1 (MQ=255) ccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGgatg < 1:166956‑M2/93‑1 (MQ=255) ccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGgatg < 2:1063338‑M2/93‑1 (MQ=255) catggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGgatga < 1:12605‑M2/94‑1 (MQ=255) gcaacgagcaatatcactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACGCCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGc < 1:784241‑M2/98‑1 (MQ=255) acgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCAtt < 1:90359‑M2/101‑1 (MQ=255) cgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCAtt > 2:868005‑M2/50‑150 (MQ=255) cgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCAtt > 1:1297827‑M2/50‑150 (MQ=255) gcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATtacat < 1:962139‑M2/105‑1 (MQ=255) gcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATtacat < 1:421795‑M2/105‑1 (MQ=255) atatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATtacatac > 2:771137‑M2/44‑150 (MQ=255) atgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATtacatac > 1:1378999‑M2/42‑148 (MQ=255) atgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATtacatac > 2:778814‑M2/42‑148 (MQ=255) atgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATtacatac > 2:1394084‑M2/42‑148 (MQ=255) atgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAg < 2:218443‑M2/109‑1 (MQ=255) gactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGat < 2:1198518‑M2/111‑1 (MQ=255) actattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGatat < 1:379606‑M2/113‑1 (MQ=255) actattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGatat < 1:1400785‑M2/113‑1 (MQ=255) attggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGc > 2:927241‑M2/36‑151 (MQ=255) attggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGc < 2:1132297‑M2/116‑1 (MQ=255) tggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGcac > 1:314679‑M2/34‑151 (MQ=255) taaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAgg > 2:1106182‑M2/31‑151 (MQ=255) aaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAgg < 2:863002‑M2/121‑1 (MQ=255) ccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCta < 2:442079‑M2/124‑1 (MQ=255) ccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCta < 1:1178103‑M2/124‑1 (MQ=255) ccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCta < 2:1439301‑M2/124‑1 (MQ=255) ccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCt > 1:332692‑M2/28‑150 (MQ=255) gcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCtatattatat < 1:1156964‑M2/132‑1 (MQ=255) cattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATtatata < 1:992503‑M2/133‑1 (MQ=255) attttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAg < 2:23172‑M2/134‑1 (MQ=255) tttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGc < 2:300991‑M2/135‑1 (MQ=255) tttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCt > 2:381729‑M2/16‑151 (MQ=255) ttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCt < 2:1439689‑M2/136‑1 (MQ=255) ttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCt < 1:487893‑M2/136‑1 (MQ=255) acgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTAtt > 2:1404102‑M2/13‑151 (MQ=255) gtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGc > 1:483070‑M2/11‑151 (MQ=255) aatgaaccTTTAAAGGGAGAATGACTAAATACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCt < 2:627190‑M2/142‑1 (MQ=255) aatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCt < 1:709608‑M2/142‑1 (MQ=255) aatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTa < 1:523609‑M2/143‑1 (MQ=255) tgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTaa > 1:89410‑M2/7‑150 (MQ=255) gaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTaaaa < 2:1266600‑M2/146‑1 (MQ=255) gaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTaaa < 1:1190201‑M2/145‑1 (MQ=255) accTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTAAAACg > 1:1161376‑M2/4‑151 (MQ=255) | GGGGTTTTTCAGACCAAAACGCGTTATGCCTGCATGAAAGCAGGAGTGAAGCGGCGTACCGCGACGCCGCTATTTATCGGAAGGTTTATCTTGCTGCGGTTTGTTGTTGACCATATCGCACAACATAGAGAGCAGCATTAACCGTACTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTAAAACG > NC_000913/852800‑853094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |