New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 16941 =NA (NA)13 (0.010) 9/148 NT 100% coding (121/675 nt) USA300HOU_pUSA300HOUMR0021 IS431 mec transposase
?CP000731 16948 = 0 (0.000)coding (114/675 nt) USA300HOU_pUSA300HOUMR0021 IS431 mec transposase

Only 100 of 235 total aligned reads displayed.

AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAacgttc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000731/17030‑16941
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  >  CP000731/16948‑17043
                                                                                                                                                                                          
agaATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 <  2:4936484/88‑1
aaGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 <  1:1025687/89‑1
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 >  1:1199919/1‑91
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 <  2:1325997/91‑1
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 >  1:3448968/1‑91
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 <  2:1945672/91‑1
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 >  2:2400915/1‑91
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 >  1:1649814/1‑91
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 <  2:3698458/91‑1
 GGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                <  2:3290558/91‑1
 GGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                >  1:5191988/1‑91
 GGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                <  2:3478170/91‑1
 GGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                <  2:5730438/91‑1
 GGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                >  2:5090159/1‑91
 GGATGTTAGCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                <  1:754724/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:1621973/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:4696759/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:4858696/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               >  2:5242944/1‑91
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  2:1437596/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  2:1726528/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:2063360/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:3172963/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:3164995/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               >  2:2585629/1‑91
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               >  2:2888393/1‑91
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:1814942/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               >  2:4823228/1‑91
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  2:3800664/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  2:4365066/91‑1
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              >  1:308100/1‑91
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              <  1:1548603/91‑1
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              <  1:3497845/91‑1
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              <  1:2746939/91‑1
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              <  1:98748/91‑1
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              <  1:220913/91‑1
    TGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTT                                                                                             <  1:1144725/91‑1
    TGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTT                                                                                             >  1:4748401/1‑91
    TGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTT                                                                                             >  1:3927745/1‑91
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  1:224413/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  1:1805818/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  2:805885/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            >  1:2503628/1‑91
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            >  1:303950/1‑91
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  2:5343564/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            >  1:5466694/1‑91
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  1:5485445/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  1:3652993/91‑1
                                                                         AAGAGAACGTGGTGTAAACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGA                        >  1:3411715/1‑91
                                                                           GAGAACGTGGTGTAAACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATA                      >  1:2009343/1‑91
                                                                                CGTGGTGTAAACGTTCCCTTAATATTTCAGATATATCACGATAACTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATC                 >  2:1788046/1‑91
                                                                                   GGTGTAAACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTT              >  1:1202880/1‑91
                                                                                    GTGTAAACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTG             >  2:3143625/1‑91
                                                                                        AAACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAA         >  2:4088555/1‑91
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTtacc       >  1:583218/1‑87
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       >  2:1858702/1‑91
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       <  2:3293678/91‑1
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       <  1:2710259/91‑1
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       >  1:3882514/1‑91
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       >  2:5154663/1‑91
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       <  2:1972481/91‑1
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       >  1:5056663/1‑91
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       <  2:4371061/91‑1
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       <  2:4500378/91‑1
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       >  2:1126650/1‑91
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       <  2:678347/91‑1
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATACTTGTTAAgt       >  2:4655533/1‑89
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      <  2:2742503/91‑1
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      >  1:2691754/1‑91
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      <  2:3659510/91‑1
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      <  1:3613267/91‑1
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCCTGTTAAATT      >  2:5563109/1‑91
                                                                                            GTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATCTCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTG     >  2:4975279/1‑91
                                                                                            GTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTG     >  1:2816338/1‑91
                                                                                            GTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTG     <  1:289346/91‑1
                                                                                            GTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTG     <  2:5061853/91‑1
                                                                                            GTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTG     <  2:2204923/91‑1
                                                                                            GTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTG     <  1:559851/91‑1
                                                                                            GTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTG     >  1:4044846/1‑91
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGT    <  1:3819571/91‑1
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGT    <  2:736461/91‑1
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGT    <  2:861946/91‑1
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGT    <  2:1448536/91‑1
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGT    <  2:1043701/91‑1
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATACTTGTTAAATTGT    >  1:417041/1‑91
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  2:3558503/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   >  1:1366917/1‑91
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  1:344383/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  2:1539287/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  1:533866/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  1:4838269/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  2:931512/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGATAAATTGTT   >  2:5543659/1‑91
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATTCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  >  2:3464568/1‑91
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  <  2:4102198/91‑1
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  >  1:3256716/1‑91
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  <  1:1347435/91‑1
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  >  2:2050436/1‑91
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  <  1:374233/91‑1
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  <  1:4250907/91‑1
                                                                                                                                                                                          
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAacgttc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000731/17030‑16941
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  >  CP000731/16948‑17043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.