| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 2352 | 91 (0.960) | 8 (0.020) | 3/258 | 11.9 | 1.7% | intergenic (+132/+36) | USA300HOU_pUSA300HOUMR0003/USA300HOU_pUSA300HOUMR0004 | hypothetical protein/hypothetical protein |
| ? | NC_012417 | = 1963 | 816 (1.000) | intergenic (+196/+130) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/2203‑2352‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttaagggttc‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < NC_012417/1963‑1824 TTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGT > 1:99632/1‑141TTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGT > 1:286974/1‑141 TTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTA > 1:85577/1‑141 TTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGAGTGTTA > 1:323235/1‑141 TATGAGGATAAATAAGGACCAGAGTATTTATGTGGAAAAAAGAAATGGATGTTGAGAAGAACCCTTAACTAAACTGGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAA < 1:96520/141‑1 ATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATATCGTGAGCTATTAATCAGACCATTCGACAAGTTTTGGGATTGTTAAG > 2:29066/1‑141 TGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTCTCGGGTTCGTTAAGG > 1:294015/1‑141 tttttttAATAAGGAACAGCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTCAACTTGCAGACTAATGTCGTCATAGCGTGAGCTATTAAGCCCACCATTCGACAAGTTTTGGGATTGTTCAGGG > 2:273274/8‑141 GATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACACTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC > 1:180144/1‑141 TGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTA > 1:136846/1‑141 ACCCTTAGCTAAACTTGCAGACGAAGGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGATAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTAT < 2:169688/141‑1 TAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCt > 2:61651/1‑140 TAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCA > 1:68402/1‑141 TAACTAAACTTGCAGACGAATGTCGGCATAGCGCGAGCTATTAAGCCGACCATTCGACAAGTTTTCCGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATACATTTTCTCGTCATATATTCCTCGCCTACTTTTTATTATCTTCc > 2:267274/1‑140 TAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGAT > 2:118705/1‑141 AAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATA > 1:338484/1‑141 AACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCAACAAGTTTTGGGATTGTTAAGGGTCCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGA < 2:226106/141‑1 tgtaaTTAAGTGTTC‑‑‑TGCTTAACATAAATAAAGTTTATCGGCATAAATGCGTCGTCTATTTGTTATTATCTTCATGATAATCATATTTTTCGTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAA < 2:209577/136‑1 taggTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTAATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATATTTATAGAAAAACAAAAAGTAAGCAACA < 2:41920/137‑1 GTTAAGGGTTC‑‑‑TTCTCAACATCAATGAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC < 1:190934/141‑1 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC > 2:292986/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC > 1:258306/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC > 1:220509/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC > 1:205623/1‑141 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC < 2:257529/141‑1 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATGTGTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC > 1:168162/1‑141 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAATTAAGCACCAACc > 1:42217/1‑140 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAATCAACAACA > 1:265484/1‑141 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA > 1:247186/1‑141 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA > 2:300657/1‑141 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA > 2:202537/1‑141 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACA > 2:36227/1‑141 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCACCAACAC > 2:138649/1‑141 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACAC < 2:334434/141‑1 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCCTGATAATCATATTTTTCTATCACCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCA > 1:243061/1‑141 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCTTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCA > 2:337673/1‑141 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATCGAAAAACAAGAAGTAAGCATCAACACCA > 1:5349/1‑141 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCA > 1:25520/1‑141 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTT < 2:207095/85‑1 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTT > 1:207095/1‑85 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATATTCATGATAATCATATTTTTCTTCCATCTCGGCAAAAGCATCATCTGTATAGAAAAACGAAAAGTAAGCAACAACACta > 1:74117/1‑139 gcGTTC‑‑‑TTCTAAACATCAATAAGTTTGAACGGCATAAATGCGTCGTCTATTTGTTATTATCTTCATGATAATCATATTTTTCTTACATCTCGTCAAAAGCAGCAGCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAA < 2:126166/139‑1 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCTTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAA > 2:53243/1‑141 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAA > 2:264879/1‑141 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAA > 1:139000/1‑141 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAA < 1:221012/141‑1 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAA > 1:251374/1‑141 GGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAAT > 1:101902/1‑141 gtgC‑‑‑TTCTAAATATAAATAAATTTTCTCGGCATAAATGCAGCGTATATTTTTTATTATCTTCATGATAATCATATTTATCATCCATCTCGTCAAAAGCATCATATTTATAGAAAAACAAAAAGTAAGCAACAACACCAATA < 2:52206/138‑1 aaC‑‑‑TTCTCAACATCAATAAATTTTCTCAGAATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTACTTCAATCTCGTCAAAAGCATCATCTATATAGAAAAACAAAAAGTAAGCAACAACACCAATAG < 2:133231/139‑1 TTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAG < 1:207506/141‑1 TTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAG < 1:108098/141‑1 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATACTCATATTTATCTTCCATCTCGTCAAAAACATCATCTTTATAGAAAACAAAAAAGTCTGCAACAACACAAATAta > 2:4918/1‑139 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATATAAAAACAAAAAGTAAGCAACAACACCAATAGta > 2:164705/1‑139 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:328452/141‑1 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:277560/141‑1 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA > 1:267341/1‑141 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 2:131513/141‑1 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:114492/141‑1 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAAAAAAAAGTAAGCAACAACACCACTAGGA > 1:325921/1‑141 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCGTTATAGAAAAACAAATAGTAATCAAAAACACCAATAGGA > 1:157882/1‑141 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCCTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA > 2:284650/1‑141 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAACCATCATCTTTATAGAAAACCAAAAAGTAAGCAACAACACCAATAGGA > 1:310966/1‑141 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTATTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAACAGGA < 1:157733/141‑1 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCCAGTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:96944/141‑1 C‑‑‑TTCTCAACATCAATAAATTTTCTCAGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 2:136766/141‑1 C‑‑‑TTCTCAACATCAATAAATCTACTCGGCATAAATGCGTCGTCTATTGTTTATTATCGTCATGATAATCATATTTCTCTTCCATCTCGTAAAAAGCATCATCTTTATAGAAAAACAAAAAGTAGCCAACACCACCAATcgta > 2:328588/1‑137 TTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/2203‑2352‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttaagggttc‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < NC_012417/1963‑1824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |