New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 12911 =NA (NA)11 (0.010) 7/148 NT NA coding (405/675 nt) USA300HOU_pUSA300HOUMR0016 IS257 transposase
?CP000731 12926 = NA (NA)coding (420/675 nt) USA300HOU_pUSA300HOUMR0016 IS257 transposase

Only 100 of 384 total aligned reads displayed.

TCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000731/13006‑12911
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaggtAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGATCA  >  CP000731/12926‑13015
                                                                                                                                                                                          
TCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTG                                                                                                 >  1:1175391/1‑91
TCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTG                                                                                                 >  1:1001193/1‑91
TCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTG                                                                                                 >  2:3369471/1‑91
TCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTG                                                                                                 <  1:3998171/91‑1
 CAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGA                                                                                                <  2:187756/91‑1
 CAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGA                                                                                                >  2:2412614/1‑91
 CAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGA                                                                                                <  1:5996690/91‑1
 CAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGA                                                                                                >  2:4165038/1‑91
  AATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCATGTTTAAGTTTACAAGCTTTAATTACTTTAACGATTGCTACCTTAGTTGAA                                                                                               >  1:5832326/1‑91
  AATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAA                                                                                               >  2:1636174/1‑91
  AATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAA                                                                                               <  1:643300/91‑1
   ATGGGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  1:3377683/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  2:5921303/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              >  1:5716020/1‑91
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  2:2457354/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  2:2304982/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              >  2:2832426/1‑91
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  2:325356/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  1:4610722/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              >  2:373393/1‑91
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  2:6435378/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  1:3698910/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  1:3510475/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  1:3447786/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  1:3610687/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  2:141918/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  2:124640/91‑1
   ATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAG                                                                                              <  1:6975629/91‑1
    TGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGG                                                                                             >  2:6715856/1‑91
    TGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGG                                                                                             <  2:138052/91‑1
    TGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGG                                                                                             <  2:566621/91‑1
    TGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGG                                                                                             <  2:6032372/91‑1
    TGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGG                                                                                             >  1:6600720/1‑91
    TGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGG                                                                                             >  1:4919133/1‑91
    TGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGG                                                                                             <  1:779258/91‑1
    TGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGG                                                                                             >  1:4526560/1‑91
    TGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGG                                                                                             <  2:2164020/91‑1
     GAGGTTATTTAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT                                                                                            <  2:6640352/91‑1
     GAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTCAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT                                                                                            >  1:6797638/1‑91
     GAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT                                                                                            <  2:1060459/91‑1
     GAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT                                                                                            >  2:305892/1‑91
     GAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT                                                                                            <  1:626778/91‑1
     GAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT                                                                                            >  1:5939609/1‑91
     GAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT                                                                                            <  1:5271897/91‑1
     GAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT                                                                                            >  2:4512538/1‑91
     GAGGTNATTCANATATTTCNATGTACAATGGCANTCAGGTTTAAGTTTAAANGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT                                                                                            <  2:5458706/91‑1
        GTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCAACGAAGGTAGC                                                                                         <  1:439187/91‑1
                  TATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCAACGAAGGTAGCAATGGTTAAA                                                                               <  1:2356301/91‑1
                                          GGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGG                                                                                             >  1:2384684/1‑53
                                                      AAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT                                                                                            <  1:5136456/42‑1
                                                      AAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT                                                                                            >  2:5136456/1‑42
                                                                                  CCTTCGTTGAAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCc               >  2:2569016/1‑90
                                                                                  CCTTCGTTGAAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCA               >  1:609651/1‑91
                                                                                    TTCGTTGAAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATT             >  1:232661/1‑91
                                                                                     TCGTTGAAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTG            >  1:2680091/1‑91
                                                                                        TTGAAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGC         >  1:2770402/1‑91
                                                                                          GAAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAA       >  1:1311827/1‑91
                                                                                           AAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAG      >  1:6884611/1‑91
                                                                                           AAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAG      <  2:206187/91‑1
                                                                                           AAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAG      <  2:6975629/91‑1
                                                                                           AAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAG      <  1:3820997/91‑1
                                                                                           AAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAG      <  1:5618413/91‑1
                                                                                           AAGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAG      <  1:2851695/91‑1
                                                                                            AGGTAGCGATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATGGAAATATCTGAATAACCTCATTGAGCAAGA     <  1:5549226/91‑1
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     >  1:4188015/1‑91
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     <  2:4822241/91‑1
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     <  1:3235583/91‑1
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     >  1:3097170/1‑91
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     <  2:5339357/91‑1
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     <  2:3428642/91‑1
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     <  1:1932929/91‑1
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     <  2:3127307/91‑1
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     >  1:5193601/1‑91
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     <  1:5446876/91‑1
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     <  2:6811544/91‑1
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     >  1:915716/1‑91
                                                                                            AGGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     >  1:6846432/1‑91
                                                                                            AGGTAGCAATGGCTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     <  2:4634728/91‑1
                                                                                            AGGTAGAAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGA     <  1:1683714/91‑1
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    >  2:855281/1‑91
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    >  2:5617545/1‑91
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    <  1:2994340/91‑1
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    >  2:5152881/1‑91
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    >  2:4998472/1‑91
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    >  2:4402560/1‑91
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    <  2:3858433/91‑1
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    <  1:4149212/91‑1
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    >  2:3640473/1‑91
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    >  1:4793092/1‑91
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    <  1:6143582/91‑1
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    >  1:6380715/1‑91
                                                                                             GGTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGAT    >  2:2230686/1‑91
                                                                                              GTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGATC   >  2:4012379/1‑91
                                                                                              GTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGATC   <  2:6314856/91‑1
                                                                                              GTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGATC   <  2:3205104/91‑1
                                                                                              GTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGATC   <  1:1771582/91‑1
                                                                                              GTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGATC   >  1:1600113/1‑91
                                                                                              GTAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTC                >  1:2218228/1‑78
                                                                                               TAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGATCA  <  2:351028/91‑1
                                                                                               TAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGATCA  >  1:2061844/1‑91
                                                                                                                                                                                          
TCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGGTTTAAGTTTAAAAGCTTTAATTACTTTAACCATTGCTACCTTCGTTGAAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000731/13006‑12911
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaggtAGCAATGGTTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGCCATTGTACATCGAAATATCTGAATAACCTCATTGAGCAAGATCA  >  CP000731/12926‑13015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.