| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2444885 | 289 (0.810) | 15 (0.050) | 10/140 | NT | 5.4% | intergenic (‑38/+187) | mleN_2/USA300HOU_RS12595 | Malate‑2H(+)/Na(+)‑lactate antiporter/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2444897 | 276 (0.880) | intergenic (‑50/+175) | mleN_2/USA300HOU_RS12595 | Malate‑2H(+)/Na(+)‑lactate antiporter/hypothetical protein | |||||
Only 100 of 460 total aligned reads displayed.
AATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTG > USA300TCH1516_ALE/2444795‑2444975 | aataatAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCT > 2:5906372‑M1/1‑91 (MQ=255) ataataACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTtctc < 2:3122971/91‑1 (MQ=255) ataataACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTtctc < 2:1903820/91‑1 (MQ=255) taataaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTca > 1:3291092/1‑91 (MQ=255) ataaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTcaca < 1:2998890/91‑1 (MQ=255) ataaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTcaca < 2:2848794/91‑1 (MQ=255) ataaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTcaca > 2:1856453/1‑91 (MQ=255) ataaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTcaca > 2:4080230/1‑91 (MQ=255) aaCAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACaaa > 2:1154763/1‑91 (MQ=255) aaGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGa > 2:2286859/1‑91 (MQ=255) aGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGAt > 1:5081615/1‑91 (MQ=255) aGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGAt < 1:5494556/91‑1 (MQ=255) ggggAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTtcatcgtttgt < 2:6994643‑M1/91‑12 (MQ=255) gAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAag > 2:4230575‑M2/1‑89 (MQ=255) ataatGCCCACGCATTGCCCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaa < 1:2394971‑M2/91‑5 (MQ=255) ataatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaa > 1:6150092‑M2/1‑87 (MQ=255) taatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaa > 2:3721718‑M2/1‑86 (MQ=255) aatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaag < 1:3208139‑M2/91‑7 (MQ=255) aatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaag > 2:2737552‑M2/1‑85 (MQ=255) aatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaag > 2:3440063‑M2/1‑85 (MQ=255) gCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaagagg < 1:3855599‑M2/91‑10 (MQ=255) cccAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaagaggt > 1:792647‑M2/1‑81 (MQ=255) cccAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaagaggt > 1:254457‑M2/1‑81 (MQ=255) cccAAGCATTGCTCTGTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaagaggt > 2:251179‑M2/1‑81 (MQ=255) ccAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGATGAAAGAGGtt > 2:5537660/1‑91 (MQ=255) ccAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGtt < 1:5959161/91‑1 (MQ=255) aaGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGtttt < 2:6933231/91‑1 (MQ=255) aaGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGtttt > 2:6579228/1‑91 (MQ=255) cATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAt > 2:4358480/1‑91 (MQ=255) cATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAt > 1:5584242/1‑91 (MQ=255) aTTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtg > 1:57511/1‑91 (MQ=255) ttGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaagaggtatttttaa < 1:721510‑M2/91‑19 (MQ=255) ttGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtgt < 2:2558022/91‑1 (MQ=255) ttGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtgt > 2:4746402/1‑91 (MQ=255) tctTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCtt < 2:2137125/91‑1 (MQ=255) ttttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTAc > 2:5351468/1‑91 (MQ=255) tttATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTAcc < 2:3855599/91‑1 (MQ=255) tATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTg < 2:4411583/91‑1 (MQ=255) aTGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGc > 2:1573178/1‑91 (MQ=255) tGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCt > 2:1510163/1‑91 (MQ=255) aCTTCCATCCTTTTTACCTGCTTTCCATTTAAAAATACCTCTTTCTCACAAACGATGCAGTAAGAGGTTTTCATGTGCTTTACCTGCTTAt > 2:597013/1‑91 (MQ=255) aCTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCGTGTGCTTTACCAGCTTAt > 1:5858513/1‑91 (MQ=255) aCTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTAt > 1:6904824/1‑91 (MQ=255) cTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATc > 2:5516477/1‑91 (MQ=255) cTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATc > 1:2482246/1‑91 (MQ=255) ttCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCt < 1:1560518/91‑1 (MQ=255) ttCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCt < 1:4742097/91‑1 (MQ=255) ttCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCt > 2:6394781/1‑91 (MQ=255) ttCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCt > 1:3391822/1‑91 (MQ=255) tCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCtt < 2:4832014/91‑1 (MQ=255) ccATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTc > 2:4970445/1‑91 (MQ=255) cATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCa < 1:3572340/91‑1 (MQ=255) tCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCaaa < 1:5179456/91‑1 (MQ=255) ccTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAAc > 2:3529566/1‑91 (MQ=255) ccTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTCCTTATCTTCAAAc > 2:3782731/1‑91 (MQ=255) cTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAAcc < 2:1002755/91‑1 (MQ=255) ttttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCAt < 1:1392412/91‑1 (MQ=255) ttttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCAt > 2:6221945/1‑91 (MQ=255) ttttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCAt > 1:2038481/1‑91 (MQ=255) tattACCTGCTCTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGACGTTTTCATGTGCTTTACCTGCTTATCTTCACACGAt > 2:5706334/3‑91 (MQ=255) ttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagt < 1:5397330‑M2/91‑47 (MQ=255) ttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTa < 1:4635736/91‑1 (MQ=255) ttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTa > 1:3751278/1‑91 (MQ=255) ttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTa > 1:3161226/1‑91 (MQ=255) aCCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACg < 1:1849969/91‑1 (MQ=255) ccTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGCGCTTTACCTGCTTATCTTCAAACCATTGCgg > 1:6493252/1‑91 (MQ=255) cTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGt < 2:6086358/91‑1 (MQ=255) ttttttCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGtt > 2:1331124/4‑91 (MQ=255) tGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGtt > 2:2792464/1‑91 (MQ=255) gCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTa > 2:2677603/1‑91 (MQ=255) gCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTa > 1:106617/1‑91 (MQ=255) gCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTa > 1:4417577/1‑91 (MQ=255) gCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTa < 1:5663457/91‑1 (MQ=255) cTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTAc < 2:82007/91‑1 (MQ=255) tttCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACt < 2:465620/91‑1 (MQ=255) tCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTgg < 1:6523801/91‑1 (MQ=255) ccAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGa > 1:2776970/1‑91 (MQ=255) aaTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAAt > 1:1133560/1‑91 (MQ=255) aaTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAAt > 1:1224616/1‑91 (MQ=255) aTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAAtt < 2:5047306/91‑1 (MQ=255) ttAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTg > 1:4534691/1‑91 (MQ=255) aaaTACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGcac < 2:1689951/91‑1 (MQ=255) aTACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACAt > 1:6446002/1‑91 (MQ=255) tACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACAtt < 1:86952/91‑1 (MQ=255) aCCTCTTTCTtcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttggg > 2:2455234‑M1/1‑10 (MQ=255) aCCTCTTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttggg < 1:2246851‑M2/91‑70 (MQ=255) aCCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTc > 1:4059259/1‑91 (MQ=255) ccTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCg > 1:4493593/1‑91 (MQ=255) ccTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCg > 1:1162331/1‑91 (MQ=255) ccTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCg > 2:5165220/1‑91 (MQ=255) ctctTTCTtcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggca > 1:3478844‑M1/1‑8 (MQ=255) ctttcttcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcatt > 2:3438957‑M1/1‑6 (MQ=255) ctttcttcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcatt > 1:2661959‑M1/1‑6 (MQ=255) ctttcttcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcatt > 1:1046979‑M1/1‑6 (MQ=255) ctTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCgaga < 2:4548407/91‑1 (MQ=255) tttcttcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcatta < 1:4997400‑M1/91‑87 (MQ=255) ttcttcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattat > 1:3265927‑M1/1‑4 (MQ=255) ttcttcatcgtttgtgagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaat < 2:5623689‑M1/78‑75 (MQ=255) ttCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattat < 1:4242038‑M2/91‑76 (MQ=255) tcACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattcc < 1:5338176‑M2/91‑79 (MQ=255) | AATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTG > USA300TCH1516_ALE/2444795‑2444975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |