BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000731	= 17001	NA (NA)	33 (0.030)	12/148	NT	100%	coding (61/675 nt)	USA300HOU_pUSA300HOUMR0021	IS431 mec transposase
*	?	CP000731	= 17016	0 (0.000)	33 (0.030)	12/148	NT	100%	coding (46/675 nt)	USA300HOU_pUSA300HOUMR0021	IS431 mec transposase

Only 100 of 176 total aligned reads displayed.

GATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTTATATCTGAAATAGTTCATACAGAAGACTCCTTTTTGTTAAAATTAT  >  CP000731/16921‑17089

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  1:6293153‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                >  1:47811‑M2/1‑91 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                >  1:4854810‑M2/1‑91 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  1:4250698‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  1:5018947‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                >  1:3953401‑M2/1‑91 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                >  2:3766216‑M2/1‑91 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  1:3811042‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  1:3347561‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                >  2:3115436‑M2/1‑91 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  2:2641683‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  1:287654‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                >  1:2657416‑M2/1‑91 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                >  1:641842‑M2/1‑91 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  1:2187852‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  2:1644003‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  1:1958805‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  1:1746026‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  2:6717803‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  2:6915913‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  1:1279478‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                <  2:1172974‑M2/91‑1 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                               >  1:1008301‑M2/1‑91 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                               <  2:1782659‑M2/91‑1 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                               <  2:3190255‑M2/91‑1 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                               >  2:355582‑M2/1‑91 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                               >  2:1320850‑M2/1‑91 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                               <  2:6104133‑M2/91‑1 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                               >  1:3492413‑M2/1‑91 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                               >  2:5800174‑M2/1‑91 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                               >  1:3311545‑M2/1‑91 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                               >  2:4676581‑M2/1‑91 (MQ=255)

  tCGTTGAGTGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              >  2:5401688‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              >  2:2689976‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:883332‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:1277108‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:6494714‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              >  2:5840595‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              >  2:5839466‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:2066525‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:2151244‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:2299327‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              >  2:5526728‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:3319573‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              >  2:5067276‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:3864377‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:4296395‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:4377818‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              >  2:4865748‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:4553896‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  2:4782750‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  1:2719730‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  1:5488757‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  1:1380801‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  1:6431665‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  1:6325162‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  1:6148644‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              >  1:2047805‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  1:445714‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  1:4505913‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  1:6057972‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  1:6043622‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              >  1:4868380‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              <  1:6025039‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                              >  1:5284204‑M2/1‑91 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                             >  2:3771152‑M2/1‑91 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                             >  1:5602618‑M2/1‑91 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                             >  2:4858400‑M2/1‑91 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                             <  2:5308727‑M2/91‑1 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                             <  2:5706503‑M2/91‑1 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                             >  2:2550408‑M2/1‑91 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                             >  1:6463558‑M2/1‑91 (MQ=255)

    gTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGTTAGTAGCCAACGGCTA                                                                            >  2:5468284‑M2/1‑91 (MQ=255)

    gTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTA                                                                            <  1:3359049‑M2/91‑1 (MQ=255)

    gTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTA                                                                            >  2:6151717‑M2/1‑91 (MQ=255)

    gTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTA                                                                            <  1:3863424‑M2/91‑1 (MQ=255)

    gTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTA                                                                            >  1:4139869‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                           >  1:107878‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                           >  2:1449038‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                           >  2:5307589‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                           <  2:5160770‑M2/91‑1 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                           <  1:6100700‑M2/91‑1 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                           >  1:946904‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                           >  2:437136‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                           >  1:2132619‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                           >  2:4027519‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                           >  1:5927702‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATAGATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                           >  1:5253361‑M2/1‑91 (MQ=255)

      tGAATGATGAACGTTTACACCACGTCCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACc                                                                          <  2:2794921‑M2/91‑2 (MQ=255)

          tgatgaACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCGTTGGCTACtatct                                                                      >  2:215689‑M2/1‑86 (MQ=255)

              gaACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCGTTGGCTACtatctaaga                                                                  >  1:306668‑M2/1‑82 (MQ=255)

              gaACGTTTACACCACGTTCCCTTAATATTTCAGATATATCACGATAACTCAATGCATATCTTAGATAGTAGCCAACGGCTACtatctaaga                                                                  <  1:889178‑M2/91‑10 (MQ=255)

                aCGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCGTTGGCTACtatctaagata                                                                >  1:2652856‑M2/1‑80 (MQ=255)

                              ttCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCGTTGGCTACtatctaagatatgcattgagctatc                                                  >  1:2363430‑M2/1‑66 (MQ=255)

                                             aGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCGTTGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaa                                   >  1:1603082‑M2/1‑51 (MQ=255)

                                                  tatCACGATAACTCAATGTATATCTTAGATAGTAGCCAACGGCTACtatctaagatatacattgagttatcgtgatatatctgaaatatta                              <  2:5515112‑M2/91‑46 (MQ=255)

                                                          tAGCTCAATGCATATCTTAGATAGTAGCCGTTGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacg                      >  2:1708679‑M2/1‑38 (MQ=255)

                                                                 aTGCATATCTTAGATAGTGGCGCTGGGCTACtatctaagatatgcattgagctatcgtgatatatcggaaatattaagagaacgtggtgta               >  2:6897848‑M2/1‑31 (MQ=255)

                                                                   gCATATCTTAGATAGTAGCCAACGGCTACtatctaagatatgcattgagttatcgtgatatatctgaaatattaagggaacgtggtgtaaa             <  1:5984465‑M2/91‑63 (MQ=255)

                                                                              aTAGTAGCCAACGGCTACtatctaagatatgcattgagctatcgtgatatatgtgaaatattaagagaacgtggtgtaaacgttcatcatt  <  1:5800562‑M2/91‑74 (MQ=255)

GATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTTATATCTGAAATAGTTCATACAGAAGACTCCTTTTTGTTAAAATTAT  >  CP000731/16921‑17089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.