BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000731	17008 =	NA (NA)	29 (0.020)	10/148	NT	100%	coding (54/675 nt)	USA300HOU_pUSA300HOUMR0021	IS431 mec transposase
*	?	CP000731	17011 =	0 (0.000)	29 (0.020)	10/148	NT	100%	coding (51/675 nt)	USA300HOU_pUSA300HOUMR0021	IS431 mec transposase

Only 100 of 215 total aligned reads displayed.

GATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTTATATCTGAAATAGTTCATACAGAAGACTCCTTTTTGTTAAAATTATATTATAAAT  >  CP000731/16921‑17098

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         <  2:1644003‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         >  1:3953401‑M2/1‑91 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         <  1:4250698‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         <  1:3347561‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         >  1:4863369‑M2/1‑91 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         >  1:2657416‑M2/1‑91 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         <  2:6717803‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         <  1:2187852‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         <  2:6915913‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         <  1:1958805‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         <  1:1746026‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         >  2:3766216‑M2/1‑91 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         <  2:2641683‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         <  2:2787973‑M2/91‑1 (MQ=255)

gATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         >  2:3118200‑M2/1‑91 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCATATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                                        <  1:5255070‑M2/91‑1 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                                        >  1:1008301‑M2/1‑91 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                                        >  2:1320850‑M2/1‑91 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                                        <  2:1016430‑M2/91‑1 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                                        >  2:5800174‑M2/1‑91 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                                        >  1:3492413‑M2/1‑91 (MQ=255)

 aTCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGG                                                                                        <  1:3308518‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       >  2:5067276‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  2:4736462‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       >  2:4865748‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:6306271‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:6325183‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  2:4377818‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:6431665‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       >  1:943804‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  2:4127933‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:2719730‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  2:1277108‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       >  2:6353302‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:2458430‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       >  2:1745967‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       >  2:2082165‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  2:3319573‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  2:2299327‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:1380801‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:1313290‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:6025039‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       >  2:5839466‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:445714‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:5019141‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:3029593‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:5358482‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:5749828‑M2/91‑1 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       >  1:6053277‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       >  2:5396011‑M2/1‑91 (MQ=255)

  tCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTCCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGC                                                                                       <  1:6929811‑M2/91‑1 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                                      >  1:6463558‑M2/1‑91 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                                      >  2:2550408‑M2/1‑91 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                                      >  2:85800‑M2/1‑91 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                                      >  1:4782799‑M2/1‑91 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                                      <  2:5706503‑M2/91‑1 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                                      >  2:3771152‑M2/1‑91 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                                      <  2:5308727‑M2/91‑1 (MQ=255)

   cGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCT                                                                                      >  1:5602618‑M2/1‑91 (MQ=255)

    gTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGTTAGTAGCCAACGGCTA                                                                                     >  2:5468284‑M2/1‑91 (MQ=255)

    gTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTA                                                                                     <  1:3359049‑M2/91‑1 (MQ=255)

    gTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTA                                                                                     <  1:3863424‑M2/91‑1 (MQ=255)

    gTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTA                                                                                     >  1:4139869‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                                    <  2:5160770‑M2/91‑1 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                                    >  2:6117102‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                                    >  2:437136‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                                    >  1:108200‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                                    >  1:5927702‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                                    >  2:1449038‑M2/1‑91 (MQ=255)

     ttGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTAC                                                                                    <  1:6100700‑M2/91‑1 (MQ=255)

       gAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         <  1:4672630‑M2/84‑1 (MQ=255)

       gAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACG                                                                                         >  2:4672630‑M2/1‑84 (MQ=255)

          tgatgaACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCGTTGGCTACtatct                                                                               >  2:215689‑M2/1‑86 (MQ=255)

                aCGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCGTTGGCTACtatctaagata                                                                         >  1:2652856‑M2/1‑80 (MQ=255)

                                             aGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCGTTGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaa                                            >  1:1603082‑M2/1‑51 (MQ=255)

                                                  tatCACGATAACTCAATGTATATCTTAGATAGTAGCCAACGGCTACtatctaagatatacattgagttatcgtgatatatctgaaatatta                                       <  2:5515112‑M2/91‑46 (MQ=255)

                                                             cTCAATGCATATCTTAGATAGTAGCCAACGGCTACtatctaagatatgcattgagttatcgcgatatatctgaaatattaagggaacgtgg                            <  1:6182456‑M2/91‑57 (MQ=255)

                                                                 aTGCATATCTTAGATAGTGGCGCTGGGCTACtatctaagatatgcattgagctatcgtgatatatcggaaatattaagagaacgtggtgta                        >  2:6897848‑M2/1‑31 (MQ=255)

                                                                   gCATATCTTAGATAGTAGCCAACGGCTACtatctaagatatgcattgagttatcgtgatatatctgaaatattaagggaacgtggtgtaaa                      <  1:5984465‑M2/91‑63 (MQ=255)

                                                                              aTAGTAGCCAACTGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcatt           <  1:2094426‑M2/91‑74 (MQ=255)

                                                                                  tagCCAACGGCTACtatctaagatatgcattgagctattgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaac       <  2:183164‑M2/91‑78 (MQ=255)

                                                                                  tagCCAACGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaac       <  2:29030‑M2/91‑78 (MQ=255)

                                                                                   agCCAACGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacg      <  2:3429009‑M2/91‑79 (MQ=255)

                                                                                   agCCAACGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacg      <  1:606689‑M2/91‑79 (MQ=255)

                                                                                   agCCAACGGCTACtatctaacatatgcattgagctatcgtgatatatctgaaatattgagagaacgtggtgtaaacgttcttcattcaacg      <  1:6389415‑M2/91‑79 (MQ=255)

                                                                                    gCCAACGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacga     <  1:894641‑M2/91‑80 (MQ=255)

                                                                                    gCCAACGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacga     <  1:3387321‑M2/91‑80 (MQ=255)

                                                                                    gCCAACGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacga     <  2:5202958‑M2/91‑80 (MQ=255)

                                                                                     ccAACGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacgca    <  2:5533913‑M2/91‑81 (MQ=255)

                                                                                      cAACGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacgatc   <  2:3630269‑M2/91‑82 (MQ=255)

                                                                                      cAACGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacgatc   <  2:3872188‑M2/91‑82 (MQ=255)

                                                                                       aaCGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacgatct  <  1:4988959‑M2/91‑83 (MQ=255)

                                                                                       aaCGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacgatct  <  1:4944450‑M2/91‑83 (MQ=255)

                                                                                       aaCGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacgatct  <  1:4022086‑M2/91‑83 (MQ=255)

                                                                                       aaCGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacgatct  <  2:5964387‑M2/91‑83 (MQ=255)

                                                                                       aaCGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacgatct  <  1:2336733‑M2/91‑83 (MQ=255)

                                                                                       aaCGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacgatct  <  2:4821768‑M2/91‑83 (MQ=255)

                                                                                       aaCGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacgatct  <  1:944555‑M2/91‑83 (MQ=255)

                                                                                       aaCGGCTACtatctaagatatgcattgagctatcgtgatatatctgaaatattaagagaacgtggtgtaaacgttcatcattcaacgatct  <  2:4303902‑M2/91‑83 (MQ=255)

                                                                                       aaCGGCTACtatctaagatatgcattgagctatcgtgatagatctgaaatatcaagagaacgtggtgtaaacgttcgtcattcaacgatct  <  1:5818696‑M2/91‑83 (MQ=255)

GATCGTTGAATGATGAACGTTTACACCACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTTATATCTGAAATAGTTCATACAGAAGACTCCTTTTTGTTAAAATTATATTATAAAT  >  CP000731/16921‑17098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.