| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 2334 | 101 (1.160) | 5 (0.010) | 4/266 | 11.4 | 1.0% | intergenic (+114/+54) | USA300HOU_pUSA300HOUMR0003/USA300HOU_pUSA300HOUMR0004 | hypothetical protein/hypothetical protein |
| ? | NC_012417 | = 1975 | 860 (1.040) | intergenic (+208/+118) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/2189‑2334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagttt‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACA < NC_012417/1975‑1836 TTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTAGTAAGCCGACCATTCG‑‑‑ACA > 1:104234/1‑141 TTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAAGTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAA > 1:124297/1‑141 TCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAG > 1:28648/1‑141 TCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAACAAATTGATGTTGTGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAG > 1:204315/1‑141 AGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTT > 2:182097/1‑141 TTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGGTTCTCCTCACCATCAATAAATTTTCTCTGCATAAATGCGTAGTCTATTTTTTATTATCTTC > 2:68696/1‑141 AACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTT‑‑‑‑A‑‑GTTAAGGGTTCGTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATAT > 2:99059/1‑141 CAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGTCTGCAAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGCCATAAATGCGTCGTCTATTTTTTTTTATCTTCCTGATAATCATATTTT > 2:20813/1‑141 CAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTT‑‑‑‑A‑‑GTTAGGTGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCT > 2:159839/1‑141 CGGCATAGCGTGAGCTATTAAGCCGACCATTCGTCTGCAAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGTCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTC > 2:20660/1‑141 taAAGTTT‑‑‑‑A‑‑GGTAAGGGTTATTCTCAACAACAATAAATATTCTAGGAATAAATTCTTTATCTATTTTTTATTATCTACATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTA < 2:114074/139‑1 aAAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCATCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAA < 2:24770/140‑1 CAAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAA > 1:269748/1‑141 CAAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAA < 1:134556/141‑1 AAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCCAAAGTATCATCTTTATAGAAAAACAAAAAGTAAG < 1:169348/141‑1 AAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAG < 1:4087/141‑1 AAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAG < 2:224361/141‑1 AAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAG < 1:297815/141‑1 AAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAG < 2:22084/141‑1 AAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAG < 1:263843/141‑1 AAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAG < 1:216186/141‑1 AAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAG < 1:210362/141‑1 AAGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAAAAAAATAAAAAGTAAG < 2:198564/141‑1 AAGTTT‑‑‑‑A‑‑GTTAAGGGTACTTCTCAACATCTATAGATTTTCGCGGCATAAATGCGTCGTCTAATTTTTGTAATCTTCATAAGAATCATATTCTTCTACCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAG < 2:213860/141‑1 AAGTTT‑‑‑‑A‑‑GTGAATGGATCTGCTCAACATCAATAAATTTTCTCGGCATAAATGTGTCGTCTATTTTTTATTATCGTCATGATAATCATATTTATCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAG < 2:172189/141‑1 aggTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTGAACATCATCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGC < 1:75662/138‑1 aatgT‑‑‑‑A‑‑GGTAAGAGTTATTCTCAACATCAAGAAAGTTTATCAGCATAAATGCGTAGTCTATTTTTTATTATCTTCATGATAATCATATTGTACTGCCATCACGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGC < 2:150464/137‑1 AGTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTCTAGAAAAATAAAAAGTAAGC > 1:182715/1‑141 AGTTT‑‑‑‑A‑‑GTTAAGGGTTCTCCTCAACATCAATAAATTGTCTCGGCATCAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGC < 1:286522/141‑1 AGTTT‑‑‑‑A‑‑GGTAAGTGTTCTTATCAACTTCAAGATAGTGTCTCGGCATAAATGCGGCGTCTATTTGTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGC < 1:310448/141‑1 AGTTT‑‑‑‑A‑‑GGTAAGGGTTCTTCTCAACATCAATAAATTGTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTAATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGC < 2:80234/141‑1 aTTT‑‑‑‑A‑‑GTTAAGGGGTCTACTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCA < 2:239218/140‑1 GTTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTAAACATCAATAAATTTTCTCGGCATAAATGAGTCGTCTATTTTTTATTATCTTCATAATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCA < 2:13716/141‑1 taT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATAATCTTTATAGAAAAACAAAAAGTAAGCAA < 2:64987/139‑1 gTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAAGAAATTTTCTCGGCATAAATGCGTCCTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAACCAA > 1:70818/2‑141 gTT‑‑‑‑A‑‑GTTAAGAGTTCTACTAAACATAAATAAATTTTCTCAGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAAACATATTTTAATTCCATCTCGACAAAAGCATCAAAATTATAGAAAAACAAAAAGTAAGCAA < 2:22891/140‑1 TTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCTGCAGAAATGCGTCGTCTATTTTTTAATATCTTCATGATAATCATATTATTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAA < 2:13769/141‑1 TTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTTTTCTTTTTTTTCAAAAACATCATCTTTATACAAACACAAAAATTAAGaga > 2:154039/1‑138 TTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAA < 1:282357/141‑1 TTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAA < 2:84581/141‑1 TTT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATAATATTTTTCATCCATCTCGTTTTACTCTTCTACCGTATAGAAAAACAAAAAGTAATCAA > 1:202871/1‑141 TTT‑‑‑‑A‑‑GTTAAGGGTGCTTATCAACATTGATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAA < 2:210197/141‑1 TT‑‑‑‑A‑‑GTTCAGGCTTCTTCTCAACACCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCAGCCCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAAC < 1:98086/141‑1 TT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATTAATAAATTTTCGCGGAATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAAC < 2:250920/141‑1 TT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATTCGGCGTCTATTTTTTATTTTCTTCCTGATAATCATATTTTTCTTCCATCGCGTCACCAGCATCATCTTTTCAGAAAAACCTAAAGTAAGCAAC > 2:105167/1‑141 TT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCACAAGCATCATCTTTATATAAAAACAAAAATTAATCAAC > 2:46393/1‑141 TT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAAC < 1:148095/141‑1 TT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAAC < 1:93648/141‑1 TT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAAC > 1:5482/1‑141 TT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAAC > 1:25713/1‑141 TT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAACTAAGCAAC > 2:249580/1‑141 TT‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATGTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAAC < 1:130566/141‑1 T‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTCCCATCTCGTCAAAAGCATCATCTTTTTAGAAAAACAAAAAACAACCAACA > 1:195171/1‑141 T‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAAGTTTCTCGTCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTTTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACA < 2:30174/141‑1 T‑‑‑‑A‑‑GTTAAGAGTTCTTCTTAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACA < 2:101339/141‑1 T‑‑‑‑A‑‑GATAAGGTTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACA < 2:275468/141‑1 TTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/2189‑2334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagttt‑‑‑‑A‑‑GTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACA < NC_012417/1975‑1836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |