| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2143370 = | 77 (0.780) | 13 (0.160) | 7/132 | NT | 16.9% | intergenic (+5/+20) | USA300HOU_RS10935/USA300HOU_RS10940 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 2143414 = | 64 (0.790) | coding (1230/1254 nt) | USA300HOU_RS10940 | hypothetical protein | |||||
Only 100 of 179 total aligned reads displayed.
TCGTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAATAGCATGATTGAAA > USA300TCH1516_ALE/2143280‑2143460 | tCGTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAA < 1:1508003‑M1/91‑1 (MQ=255) gTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAA > 1:914565‑M1/1‑91 (MQ=255) ttATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAA < 1:2824686‑M1/91‑1 (MQ=255) taaaagttggctagcaattgtatgttctatgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaataaa > 1:1579610‑M1/89‑91 (MQ=255) aaagttggctagcaattgtatgttctatgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaataaaaa < 1:3839559‑M1/5‑1 (MQ=255) gttggctagcaattgtatgttctatgatggtggtattttcaatcatgctattcttatttgtaaagtgaaataaaaagaaaaatAAAAACGa < 1:3866674‑M1/8‑1 (MQ=255) tCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAAT < 1:1156357‑M1/91‑1 (MQ=255) tCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAAT > 1:2494401‑M1/1‑91 (MQ=255) tCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAAT > 1:2490929‑M1/1‑91 (MQ=255) tggctagcaattgtatgttctatgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAAt > 1:501166‑M1/82‑91 (MQ=255) ggctagcaattgtatgttctatgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATc < 1:2605109‑M1/11‑1 (MQ=255) ggctagcaattgtatgttctatgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATc < 1:1720131‑M1/11‑1 (MQ=255) cAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCA > 1:1035759‑M1/1‑91 (MQ=255) cAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCA > 1:3043571‑M1/1‑91 (MQ=255) cAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCA > 1:2104686‑M1/1‑91 (MQ=255) gctagcaattgtatgttctatgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATca < 1:455192‑M1/12‑1 (MQ=255) gctagcaattgtatgttctatgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATca < 1:2500953‑M1/12‑1 (MQ=255) gctagcaattgtatgttctatgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATca < 1:2499356‑M1/12‑1 (MQ=255) gctagcaattgtatgttctatgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATca > 1:2156425‑M1/80‑91 (MQ=255) ctagcaattgtatgttctatgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATcac > 1:780552‑M1/79‑91 (MQ=255) ttACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATcacac > 1:1869563/1‑91 (MQ=255) tACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATcacaca < 1:2553879/91‑1 (MQ=255) cTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACg > 1:2013871/1‑91 (MQ=255) cTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACg > 1:3369436/1‑91 (MQ=255) tAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTATATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGa > 1:3594399/1‑91 (MQ=255) aTCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGAtt > 1:140948/1‑91 (MQ=255) aTCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGAtt > 1:735993/1‑91 (MQ=255) aTCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGAtt > 1:1915352/1‑91 (MQ=255) ggatgttctatgatggtggtattttcaatcatgcaattcttagttgtaaagcgaaataataagaaagatCAAAACGAATCACACACGGAtt > 1:650579‑M1/70‑91 (MQ=255) cTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTAtc < 1:230333/91‑1 (MQ=255) gAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTAtcgt > 1:3107837/1‑91 (MQ=255) gAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTAtcgt > 1:677108/1‑91 (MQ=255) gAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTAtcgt > 1:854334/1‑91 (MQ=255) gAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTAtcgt > 1:677004/1‑91 (MQ=255) gCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACAgcgacgataatccgtg < 1:3301341‑M1/91‑17 (MQ=255) ctatgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATCACACACGGATTAtcgtcg > 1:1208770‑M1/63‑91 (MQ=255) atgatggtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATCACACACGGATTATCGTCGCt > 1:93452‑M1/61‑91 (MQ=255) ttGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AGAAAAAACGAATCACAgcgacgataatccgtgtgt < 1:2835221‑M1/91‑20 (MQ=255) ttGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACAgcgacgataatccgtgtgt < 1:840872‑M1/91‑20 (MQ=255) tGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtg < 1:2690399‑M2/91‑5 (MQ=255) tGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtg < 1:3142709‑M2/91‑5 (MQ=255) tttcaaagccaCGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtga < 1:3962576‑M2/87‑6 (MQ=255) gAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtga < 1:2608858‑M2/91‑6 (MQ=255) ttcaaagccACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgat < 1:1164398‑M2/88‑7 (MQ=255) ttcaaagccACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgat < 1:2154945‑M2/88‑7 (MQ=255) ttcaaagccACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgat < 1:307622‑M2/88‑7 (MQ=255) ttcaaagccACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgat < 1:284104‑M2/88‑7 (MQ=255) ttcaaagccACGCAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgat < 1:3184876‑M2/88‑7 (MQ=255) aaaaaaGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACGgcgacgataatccgtgtgtgat < 1:1377112‑M1/91‑23 (MQ=255) aaaaaaGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgat > 1:412711‑M2/1‑85 (MQ=255) aaaaaGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACAgcgacgataatccgtgtgtgatt < 1:2268948‑M1/91‑24 (MQ=255) aaaaaGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACAgcgacgataatccgtgtgtgatt < 1:58717‑M1/91‑24 (MQ=255) gtggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATCACACACGGATTATGGTCGCTGTGAtt > 1:3194639‑M1/55‑91 (MQ=255) gtagtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATCACACACGGATTATCGTCGCTGTGAtt > 1:1343471‑M1/55‑91 (MQ=255) aaaGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgattcg < 1:3509920‑M2/91‑10 (MQ=255) ggtattttcaatcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCg > 1:2898737‑M1/53‑91 (MQ=255) aaGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgattcgt > 1:1793521‑M2/1‑81 (MQ=255) aGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACAgcgacgataatccgtgtgtgattcgtt < 1:679120‑M1/91‑28 (MQ=255) aGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgattcgtt > 1:2271832‑M2/1‑80 (MQ=255) gCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgattcgttt > 1:62798‑M2/1‑79 (MQ=255) ccACGGAACAAGCGAATTTTATGTATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgattcgtttt < 1:1533260‑M2/91‑14 (MQ=255) ccACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgattcgtttt > 1:625419‑M2/1‑78 (MQ=255) ccACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgattcgtttt > 1:2683965‑M2/1‑78 (MQ=255) ccACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgattcgtttt < 1:390218‑M2/91‑14 (MQ=255) cACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgattcgttttt < 1:2800528‑M2/91‑15 (MQ=255) cACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCtgtgattcgttttt < 1:2800737‑M2/91‑15 (MQ=255) aCGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTa > 1:2509849/1‑91 (MQ=255) aCGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTa > 1:2925996/1‑91 (MQ=255) aCGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTa < 1:2169879/91‑1 (MQ=255) ggAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTAtt < 1:1551867/91‑1 (MQ=255) gAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AATAAAAACGAATCACAgcgacgataatccgtgtgtgattcgtttttttta < 1:1200454‑M1/91‑35 (MQ=255) aaCAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTAtttt < 1:567237/91‑1 (MQ=255) atcatgctattcttatttgtaaagcgaaataaaaagaaaaatAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTAtttt > 1:1554781‑M1/43‑91 (MQ=255) gCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCttt < 1:3572983/91‑1 (MQ=255) aaTTTTATATATAACATTTTTATTCCATAAT‑‑AAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTAt > 1:3172765/1‑91 (MQ=255) aTTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTAt < 1:3136277/91‑1 (MQ=255) aTTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTAt > 1:549164/1‑91 (MQ=255) ttttATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTAtt < 1:518048/91‑1 (MQ=255) ttATATATCACATTTTTATTCCATAATAAAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTAttt < 1:2583096/91‑1 (MQ=255) tatataTCACATTTTTATTCCATAAT‑‑AAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGc < 1:136165/91‑1 (MQ=255) atatatCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGc > 1:3713362/1‑91 (MQ=255) tatatCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCt > 1:3484832/1‑91 (MQ=255) tatatCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCt > 1:2802586/1‑91 (MQ=255) atatCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCtt < 1:1021486/91‑1 (MQ=255) acaTTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACaa < 1:4058489/91‑1 (MQ=255) acaTTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACaa > 1:684862/1‑91 (MQ=255) acaTTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACaa > 1:1192346/1‑91 (MQ=255) caTTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACaaa < 1:3065877/91‑1 (MQ=255) caTTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACaaa > 1:3567526/1‑91 (MQ=255) aTTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAAt < 1:3780882/91‑1 (MQ=255) ttCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAATa > 1:403630/1‑91 (MQ=255) ttCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAATa > 1:3450251/1‑91 (MQ=255) ccATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAATAGc > 1:2254153/1‑91 (MQ=255) ccATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAATAGc > 1:2982946/1‑91 (MQ=255) ccATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAATAGc > 1:3635015/1‑91 (MQ=255) ataat‑aAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAATAGCAt > 1:806649/1‑91 (MQ=255) aaat‑aaAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAATAGCATg < 1:2170432/90‑1 (MQ=255) aaaaaaaCGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAATAGCATGATTGa < 1:1272306/91‑1 (MQ=255) aaaaaaCGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAATAGCATGATTGaa > 1:715102/1‑91 (MQ=255) aaaaaCGAATCACAgcgacgataatccgtgtgtgattcgttttttttattatggaataaaaatgtgatatataaaattcgcttgttccgtg < 1:2800528‑M1/91‑78 (MQ=255) | TCGTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAAT‑AAAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGAATAGCATGATTGAAA > USA300TCH1516_ALE/2143280‑2143460 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |