| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2787502 = | 90 (0.920) | 13 (0.150) | 9/142 | NT | 14.5% | intergenic (+48/‑192) | zipA_3/manR_2 | Cell division protein ZipA/Transcriptional regulator ManR |
| ? | USA300TCH1516_ALE | 2787547 = | 74 (0.850) | intergenic (+93/‑147) | zipA_3/manR_2 | Cell division protein ZipA/Transcriptional regulator ManR | |||||
Only 100 of 147 total aligned reads displayed.
GCCTTCTAAACAAACACCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCG > USA300TCH1516_ALE/2787412‑2787592 | gCCTTCTAAACAAACACCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAA > 1:2004120‑M1/1‑91 (MQ=255)attattaaacatgagagcttatacatacgtcaatgacattaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaaga < 1:726183‑M1/1‑1 (MQ=255) ttattaaacatgagagcttatacatacgtcaatgacattaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagaa > 1:1185027‑M1/90‑91 (MQ=255) ttattaaacatgagagcttatacatacgtcaatgacattaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagaa > 1:293104‑M1/90‑91 (MQ=255) cTTCTAAACAAACACCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAAC < 1:1295807‑M1/91‑1 (MQ=255) ttaaacatgagagcttatacatacgtcaatgacattaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAAcag < 1:135085‑M1/5‑1 (MQ=255) cTAAACAAACACCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGC < 1:3248789‑M1/91‑1 (MQ=255) aacatgagagcttatacatacgtcaatgacattaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAAcagcag < 1:2749291‑M1/8‑1 (MQ=255) aaacaaacACCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAG > 1:2466102‑M1/1‑91 (MQ=255) acatgagagcttatacatacgtcaatgacattaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGt < 1:1100353‑M1/9‑1 (MQ=255) acatgagagcttatacatacgtcaatgacattaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGt < 1:4099355‑M1/9‑1 (MQ=255) acatgagagcttatacatacatcaatgacattaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGt > 1:3887546‑M1/83‑91 (MQ=255) caaacaCCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTga > 1:664429/1‑91 (MQ=255) caaacaCCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTga < 1:617282/91‑1 (MQ=255) caaacaCCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTga < 1:522114/91‑1 (MQ=255) caaacaCCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTga < 1:3926296/91‑1 (MQ=255) aaacaCCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTgag > 1:99141/1‑91 (MQ=255) acCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGatat < 1:2832238/91‑1 (MQ=255) acCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGatat < 1:1483989/91‑1 (MQ=255) ccTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATAtt > 1:2911477/1‑91 (MQ=255) cTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATAttt > 1:116532/1‑91 (MQ=255) cTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATAttt < 1:2267125/91‑1 (MQ=255) cAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATAttttt > 1:1710933/1‑91 (MQ=255) cAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATAttttt > 1:584508/1‑91 (MQ=255) aaGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTc < 1:3958736/91‑1 (MQ=255) aaGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTc > 1:1743097/1‑91 (MQ=255) gCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTa > 1:1596535/1‑91 (MQ=255) gCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTa > 1:2805852/1‑91 (MQ=255) gCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTa > 1:3116823/1‑91 (MQ=255) cacaATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTAt < 1:2616605/91‑1 (MQ=255) cacaATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTAt < 1:358463/91‑1 (MQ=255) cacaATCACCTAAAAATAAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTAt < 1:1281679/91‑1 (MQ=255) acaATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTAtt < 1:1111359/91‑1 (MQ=255) aaTCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTg > 1:951314/1‑91 (MQ=255) aTCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGa > 1:3704168/1‑91 (MQ=255) cACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGaaa < 1:1016270/91‑1 (MQ=255) cACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGaaa > 1:1294161/1‑91 (MQ=255) aCCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAat < 1:1182427/91‑1 (MQ=255) aattacattaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTAAGATATTTTTCTATTTGAAata > 1:3216910‑M1/60‑91 (MQ=255) cTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTaagatatttcaaatagaaaaatat < 1:1909183‑M1/91‑25 (MQ=255) gacattaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCt > 1:2660795‑M1/57‑91 (MQ=255) aaaaTTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCtt < 1:3887406/91‑1 (MQ=255) aaaTTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTa > 1:1337131‑M2/1‑90 (MQ=255) attacagcgaacttttatatgattttaacagagtgcgaattatgctaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTAc > 1:1236017‑M1/54‑91 (MQ=255) aaTTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTac > 1:3712807‑M2/1‑89 (MQ=255) ttaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTAct > 1:3723841‑M1/53‑91 (MQ=255) ttAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTaagatatttcaaatagaaaaatatctcactg < 1:2801261‑M1/91‑32 (MQ=255) ttAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTactg < 1:3941791‑M2/91‑5 (MQ=255) tAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTaagatatttcaaatagaaaaatatctcactgc < 1:2292378‑M1/91‑33 (MQ=255) aagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTActgct > 1:1821884‑M1/50‑91 (MQ=255) aaTCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTaagatatttcaaatagaaaaatatctcactgct < 1:1165834‑M1/91‑34 (MQ=255) aTCATTTGCCTGATACGTCCACAAGTGCCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTactgctg > 1:211996‑M2/1‑84 (MQ=255) tCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTactgctgt > 1:3334420‑M2/1‑83 (MQ=255) gcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGt > 1:1032477‑M1/48‑91 (MQ=255) gcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGt > 1:3649046‑M1/48‑91 (MQ=255) gcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGt > 1:2204245‑M1/48‑91 (MQ=255) aTTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTc < 1:3766589/91‑1 (MQ=255) tttGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCt > 1:2942536/1‑91 (MQ=255) aacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCt > 1:3108013‑M1/45‑91 (MQ=255) tGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTaagatatttcaaatagaaaaatatctcactgctgtttttc < 1:1802336‑M1/91‑41 (MQ=255) tGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCttt > 1:1128420/1‑91 (MQ=255) tGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCttt > 1:1132904/1‑91 (MQ=255) cTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTAtt < 1:1531192/91‑1 (MQ=255) tACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCa < 1:1085699/91‑1 (MQ=255) atgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCa > 1:783163‑M1/36‑91 (MQ=255) aCGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCAt < 1:611607/91‑1 (MQ=255) ccACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAAtt < 1:489075/91‑1 (MQ=255) cacaAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTc > 1:876963/1‑91 (MQ=255) cacaAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTc > 1:1777291/1‑91 (MQ=255) acaAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCg > 1:3557577/1‑91 (MQ=255) acaAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCg < 1:3008633/91‑1 (MQ=255) caAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGc < 1:1100888/91‑1 (MQ=255) aGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCAc > 1:4026376/1‑91 (MQ=255) tACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCActc > 1:217523/1‑91 (MQ=255) aCCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCActct < 1:3634003/91‑1 (MQ=255) ccAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTg < 1:1996088/91‑1 (MQ=255) ccAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTg < 1:1996524/91‑1 (MQ=255) ccAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTg < 1:1142450/91‑1 (MQ=255) cAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAGTATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGt < 1:3592921/91‑1 (MQ=255) cAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGt > 1:3442749/1‑91 (MQ=255) aGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGtt > 1:3538932/1‑91 (MQ=255) aGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGtt > 1:4118825/1‑91 (MQ=255) tGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTaaa < 1:2656044/91‑1 (MQ=255) tGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGCTaaa > 1:3454905/1‑91 (MQ=255) aaaTTCAGATAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCat < 1:3974459/91‑1 (MQ=255) aaaTTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCat < 1:763354/91‑1 (MQ=255) aTTCAGAAAAACCGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCctat > 1:3208285/1‑91 (MQ=255) aTTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCatat < 1:1407380/91‑1 (MQ=255) aTTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCatat < 1:2798248/91‑1 (MQ=255) aGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATaaaa < 1:1487491/91‑1 (MQ=255) gAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAg > 1:1252561/1‑91 (MQ=255) gAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAg > 1:2592064/1‑91 (MQ=255) aaaaaCAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATGAAAGt > 1:2827729/1‑91 (MQ=255) aaaaaCAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGt < 1:2210525/91‑1 (MQ=255) aaaaCAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGtt < 1:1546643/91‑1 (MQ=255) aaaaCAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGtt > 1:510322/1‑91 (MQ=255) aaaaCAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGtt > 1:4147106/1‑91 (MQ=255) aaaCAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTc > 1:2788975/1‑91 (MQ=255) aaCAGCAGTaagatatttcaaatagaaaaatatctcactgctgtttttctgaatttatgcatctggtacttgtggacgtatcaggcaaatg < 1:2577086‑M1/91‑83 (MQ=255) aaCAGCAGTaagatatttcaaatagaaaaatatctcactgctgtttttctgaatttatgcatctggtacttgtggacgtatcaggcaaatg < 1:3616527‑M1/91‑83 (MQ=255) | GCCTTCTAAACAAACACCTCAAGCACAATCACCTAAAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCG > USA300TCH1516_ALE/2787412‑2787592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |