| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | 20439 = | 327 (0.930) | 32 (0.100) | 14/148 | NT | 10.1% | coding (632/675 nt) | USA300HOU_pUSA300HOUMR0027 | IS431mec transposase |
| ? | CP000731 | 20463 = | 269 (0.830) | coding (608/675 nt) | USA300HOU_pUSA300HOUMR0027 | IS431mec transposase | |||||
Only 100 of 421 total aligned reads displayed.
AAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTT > CP000731/20349‑20528 | aaagtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaacc < 1:3162139‑M1/2‑1 (MQ=255) aaagtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaacc < 1:60678‑M1/2‑1 (MQ=255) aaagtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaacc > 1:3646629‑M1/90‑91 (MQ=255) aaGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATcc < 1:2039317/91‑1 (MQ=34) aagtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCg > 1:3389172‑M1/89‑91 (MQ=255) aagtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCg > 1:175642‑M1/89‑91 (MQ=255) aagtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCg > 1:1219600‑M1/89‑91 (MQ=255) aagtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCg < 1:385628‑M1/3‑1 (MQ=255) gTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGt < 1:650393/91‑1 (MQ=34) gTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGt < 1:3529430/91‑1 (MQ=34) agtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGt > 1:1026543‑M1/88‑91 (MQ=255) agtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGt > 1:2958119‑M1/88‑91 (MQ=255) gtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGTa < 1:1356567‑M1/5‑1 (MQ=255) gtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGTa < 1:3734865‑M1/5‑1 (MQ=255) gtaagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGTa > 1:2526331‑M1/87‑91 (MQ=255) taagaaagacaagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGTAg < 1:1597289‑M1/6‑1 (MQ=255) aaaaaaTATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAg > 1:2392568/1‑91 (MQ=34) aaaaaaTATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAg > 1:1018660/1‑91 (MQ=34) aaaaaaTATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAg > 1:170929/1‑91 (MQ=34) aaaaaaTATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAg > 1:4117439/1‑91 (MQ=34) aaaaaTATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGa < 1:3089421/91‑1 (MQ=34) aaaaTATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGAt < 1:3557535/91‑1 (MQ=34) aaaTATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATc > 1:3417825/1‑91 (MQ=34) aaaTATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATc > 1:3376341/1‑91 (MQ=34) ataGCTAATGACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGaa < 1:3973050/91‑1 (MQ=21) taGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAag > 1:1909753/1‑91 (MQ=34) taGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAag < 1:4081737/91‑1 (MQ=34) caagatatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGTAGATCTGAaga > 1:1076708‑M1/77‑91 (MQ=255) gCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAagag > 1:1653871/1‑91 (MQ=34) gCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAagag > 1:778612/1‑91 (MQ=34) cTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAgaga < 1:1723081/91‑1 (MQ=34) cTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAgaga > 1:1416302/1‑91 (MQ=34) tAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGAc > 1:2195209/1‑91 (MQ=34) aaTCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGAcc < 1:3922653/91‑1 (MQ=33) aaTCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGAcc < 1:591673/91‑1 (MQ=34) aaTCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGAcc < 1:3051070/91‑1 (MQ=34) tatcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGTAGATCTGAAGAGACCt > 1:2784213‑M1/72‑91 (MQ=255) aTCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCt < 1:1812607/91‑1 (MQ=34) atcaaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGTAGATCTGAAGAGACCTa > 1:3267708‑M1/71‑91 (MQ=255) aCTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACg < 1:3697351/91‑1 (MQ=38) cTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACgg > 1:1335077/1‑91 (MQ=39) cTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACgg < 1:299679/91‑1 (MQ=39) aaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGTAGATCTGAAGAGACCTACgg > 1:1213941‑M1/68‑91 (MQ=255) aaagtatcaatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGTAGATCTGAAGAGACCTACgg > 1:2088512‑M1/68‑91 (MQ=255) atatCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCTTGGGGAAAATCCGTAGATATGAAGAGACCTACGGTTCtt > 1:2124605/1‑91 (MQ=255) atatCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCtt > 1:2277610/1‑91 (MQ=39) tatCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCttt > 1:1187692/1‑91 (MQ=39) atCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCtttt > 1:872823/1‑91 (MQ=39) atCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCtttt < 1:898445/91‑1 (MQ=38) tCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCttttt < 1:236708/91‑1 (MQ=39) aatacggcaaagaatactttaaaaggtattgaatgtatttacgctctatataaaaagaaCCGTAGATCTGAAGAGACCTACGGTCCttttt > 1:3225792‑M1/60‑91 (MQ=255) cATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTta > 1:250460/1‑91 (MQ=37) aTGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTtat < 1:986536/91‑1 (MQ=39) aTGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTtat > 1:1568130/1‑91 (MQ=39) gTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTtatat < 1:524313/91‑1 (MQ=39) gTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTtatat > 1:919940/1‑91 (MQ=39) gTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTtatat > 1:1390439/1‑91 (MQ=39) cAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATag < 1:2178325/91‑1 (MQ=39) aGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATaga < 1:836495/91‑1 (MQ=39) gtgtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCACGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATagag > 1:3590318/1‑91 (MQ=255) tCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTa < 1:2577877/91‑1 (MQ=39) gTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTaaa > 1:2919992/1‑91 (MQ=39) aaCTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACa > 1:2721008/1‑91 (MQ=39) cTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAtt > 1:2751795/1‑91 (MQ=39) gCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCaa > 1:3959556/1‑91 (MQ=39) cTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAAt > 1:542915/1‑91 (MQ=39) cTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAAt > 1:746357/1‑91 (MQ=39) tAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATa < 1:3479479/91‑1 (MQ=39) tAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATa < 1:388362/91‑1 (MQ=39) gCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATAcc < 1:1152333/91‑1 (MQ=39) cATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCt < 1:2013263/91‑1 (MQ=39) atgatgCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCtt > 1:3844804/1‑91 (MQ=39) tgatgCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCttt < 1:1865993/91‑1 (MQ=38) tgatgCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCttt < 1:3351452/91‑1 (MQ=39) tgatgCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCttt > 1:2847816/1‑91 (MQ=39) tgatgCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCttt > 1:496222/1‑91 (MQ=38) tgCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTaa > 1:1481386/1‑91 (MQ=39) gCTAATTTCGGGGCATGGGGAAAATCCGTAGATCGGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTaaa < 1:414779/91‑1 (MQ=255) cTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAg < 1:3028125/91‑1 (MQ=39) aaTTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTa > 1:1037808/1‑91 (MQ=39) aaTTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTa < 1:1998493/91‑1 (MQ=39) tttCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTAtt > 1:1268529/1‑91 (MQ=39) tCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCt > 1:1329007/1‑91 (MQ=39) tCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCt < 1:1822537/91‑1 (MQ=39) gTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCttt < 1:3281049/91‑1 (MQ=39) tGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTg > 1:1137743/1‑91 (MQ=39) ctatataaaaagaaCCGTAGGTCTCTTCAGATCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGc < 1:738899‑M1/77‑1 (MQ=255) cATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCg > 1:246973/1‑91 (MQ=40) cATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCg < 1:2516308/91‑1 (MQ=255) cATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCg < 1:2057897/91‑1 (MQ=39) tGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTa < 1:696014/91‑1 (MQ=255) ggggAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTAt < 1:1960548/91‑1 (MQ=255) ggggAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTAt < 1:2246744/91‑1 (MQ=255) gggAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTAtt < 1:1083313/91‑1 (MQ=255) ggAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTg < 1:947908/91‑1 (MQ=40) aaaagaaCCGTAGGTCTCTTCAGATCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTg < 1:2433328‑M1/84‑1 (MQ=255) gAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGa > 1:1442442/1‑91 (MQ=39) aaaTCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATa < 1:3804014/91‑1 (MQ=37) aaaTCCGTAGATCTGAAGAGACCTACGGCTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATa > 1:2326970/1‑91 (MQ=255) tCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACtt < 1:631754/91‑1 (MQ=39) | AAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTT > CP000731/20349‑20528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |