| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 920377 = | 81 (0.820) | 9 (0.110) | 7/132 | NT | 12.9% | intergenic (+6/‑207) | USA300HOU_RS04555/USA300HOU_RS04565 | Putative monooxygenase/hypothetical protein |
| ? | USA300TCH1516_ALE | 920443 = | 55 (0.680) | intergenic (+72/‑141) | USA300HOU_RS04555/USA300HOU_RS04565 | Putative monooxygenase/hypothetical protein | |||||
Only 100 of 120 total aligned reads displayed.
AATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGC > USA300TCH1516_ALE/920353‑920533 | aatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGt < 1:3716191/91‑1 (MQ=255) atcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt < 1:1604599/91‑1 (MQ=255) atcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt > 1:1451105/1‑91 (MQ=255) atcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt < 1:3711245/91‑1 (MQ=255) atcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt > 1:1450356/1‑91 (MQ=255) tcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGttt < 1:2924512/91‑1 (MQ=255) aTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt > 1:3774809/1‑91 (MQ=255) gCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTCTTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAt < 1:3495658/91‑1 (MQ=255) ttggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtttt > 1:2994935‑M1/16‑91 (MQ=255) atatAAATAATCGACCGCAATCCACGAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtttt < 1:3847739/91‑1 (MQ=255) tataAAAAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTa < 1:528535/91‑1 (MQ=255) aaataaTCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCa > 1:2617390/1‑91 (MQ=255) aaaatagaaacgcaatccacaaaaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCaa > 1:2994935‑M2/77‑91 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAttt > 1:2155517/1‑91 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAttt < 1:1889717/91‑1 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTATGGATTGCGTTTCTATTTTACCAAttt > 1:1050379/1‑91 (MQ=255) atCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTa > 1:2564036/1‑91 (MQ=255) cGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAAt > 1:227994/1‑91 (MQ=255) aCCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCa > 1:1851813/1‑91 (MQ=255) ccGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCaa > 1:1942213/1‑91 (MQ=255) ccGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCaa < 1:1018267/91‑1 (MQ=255) ccGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCaa < 1:1013444/91‑1 (MQ=255) GCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAAc > 1:2796900‑M1/1‑91 (MQ=255) CAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACg > 1:4118828‑M1/1‑91 (MQ=255) AATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGa > 1:72240‑M1/1‑91 (MQ=255) ATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaa > 1:2509149‑M1/1‑91 (MQ=255) TCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaaa < 1:3269682‑M1/91‑1 (MQ=255) ccacaaaaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGaaaa > 1:2999811‑M2/61‑91 (MQ=255) CCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaaaa < 1:3279934‑M1/91‑1 (MQ=255) CCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaaaa < 1:3978128‑M1/91‑1 (MQ=255) CACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAAc > 1:2104496‑M1/1‑91 (MQ=255) ACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACa > 1:2819334‑M1/1‑91 (MQ=255) ACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACa > 1:2818900‑M1/1‑91 (MQ=255) ACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACa > 1:588334‑M1/1‑91 (MQ=255) aaaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCa > 1:4052200‑M2/56‑91 (MQ=255) AAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCa > 1:3251327‑M1/1‑91 (MQ=255) AAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCa < 1:224881‑M1/91‑1 (MQ=255) AAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCa > 1:3250783‑M1/1‑91 (MQ=255) AAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCTATTTTTGTGGATTACGTTTCTATTTTACCAATTTAATCAAACGAAAACATCaa < 1:3852091‑M1/91‑1 (MQ=255) AGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAg < 1:2977151‑M1/91‑1 (MQ=255) atggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGc > 1:4099234‑M2/53‑91 (MQ=255) ggcaagcactaaaataatgtttgggggtgcttgccatttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCt > 1:2780430‑M2/52‑91 (MQ=255) ggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTg > 1:456166‑M2/51‑91 (MQ=255) ggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTg > 1:717851‑M2/51‑91 (MQ=255) acaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTg < 1:1403411/91‑1 (MQ=255) caagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGa > 1:2207178/1‑91 (MQ=255) caagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGa > 1:1975912/1‑91 (MQ=255) aagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGaa > 1:3485485/1‑91 (MQ=255) agcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAg > 1:1486695/1‑91 (MQ=255) agcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGAGGATTGCGTTTCTATTTTCCCAATTTAATCAAACGAAAACATCAAGCTGAAg > 1:1483121/1‑91 (MQ=255) gcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGa < 1:1503256/91‑1 (MQ=255) cacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGAt > 1:1340025/1‑91 (MQ=255) cccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCg < 1:924204/91‑1 (MQ=255) ccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGc > 1:1175537/1‑91 (MQ=255) ccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGc > 1:1175632/1‑91 (MQ=255) ccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGc > 1:1175708/1‑91 (MQ=255) cccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGcc < 1:1691531/91‑1 (MQ=255) cccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGcc < 1:1633939/91‑1 (MQ=255) aaaataatgtttgggggtgcttgtcatttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGcc > 1:1370495‑M2/42‑91 (MQ=255) cAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGa > 1:1407545/1‑91 (MQ=255) aaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaaa > 1:2619648/1‑91 (MQ=255) aaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaaa < 1:2462852/91‑1 (MQ=255) aCATTATTTTAGTGCTTGCTATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAg > 1:810364/1‑91 (MQ=255) cATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGa > 1:3701733/1‑91 (MQ=255) ttattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtt > 1:3810701/1‑91 (MQ=255) ttattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtt < 1:2315811/91‑1 (MQ=255) attTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtttt < 1:1504621/91‑1 (MQ=255) ttttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTa > 1:805933/1‑91 (MQ=255) ttttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTa < 1:1330072/91‑1 (MQ=255) tttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTaa > 1:1784226/1‑91 (MQ=255) ttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAAt > 1:2719531/1‑91 (MQ=255) tGCTTGCCATTTTTGTGGACTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCACGCTGAAGATCGCCGAAAGATTTTAATCAAg > 1:485841/1‑91 (MQ=255) tGCATGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAg < 1:3339958/91‑1 (MQ=255) aTTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACa < 1:430885/91‑1 (MQ=255) tttttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAAcct < 1:189464/91‑3 (MQ=255) tttttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACAt < 1:172223/91‑1 (MQ=255) tttttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACAt > 1:2701780/1‑91 (MQ=255) tttttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACAt < 1:189890/91‑1 (MQ=255) tttttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGATGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACAt < 1:3484007/91‑1 (MQ=255) ttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATc > 1:2550148‑M2/15‑91 (MQ=255) tttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCa > 1:93031‑M2/14‑91 (MQ=255) tttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCa > 1:1859724‑M2/14‑91 (MQ=255) ttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCaa > 1:1859644‑M2/13‑91 (MQ=255) ttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCaa > 1:1860903‑M2/13‑91 (MQ=255) gtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAAc < 1:3505964‑M2/81‑1 (MQ=255) gtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAAc < 1:2794135‑M2/81‑1 (MQ=255) gtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAAc < 1:2149698‑M2/81‑1 (MQ=255) gtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAAc < 1:2148498‑M2/81‑1 (MQ=255) tggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACt < 1:959874‑M2/82‑1 (MQ=255) tggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACt > 1:172633‑M2/10‑91 (MQ=255) tggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACt > 1:173360‑M2/10‑91 (MQ=255) ggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTa < 1:2535885‑M2/83‑1 (MQ=255) ggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTa > 1:3483856‑M2/9‑91 (MQ=255) ggattgcgTATCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACAACAAACTa > 1:2083669‑M2/9‑91 (MQ=255) ggattgcgTATCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACAACAAACTa > 1:2083827‑M2/9‑91 (MQ=255) gattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATGAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTaa > 1:3600525‑M2/8‑91 (MQ=255) gattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTaa > 1:3600238‑M2/8‑91 (MQ=255) tgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGt < 1:1226240‑M2/87‑1 (MQ=255) gcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGtt > 1:2689588‑M2/4‑91 (MQ=255) gcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGtt > 1:1145954‑M2/4‑91 (MQ=255) | AATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGC > USA300TCH1516_ALE/920353‑920533 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |