| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2023587 = | 93 (0.950) | 8 (0.090) | 6/148 | NT | 9.1% | coding (200/207 nt) | USA300HOU_RS10200 | hypothetical protein |
| ? | USA300TCH1516_ALE | 2023639 = | 73 (0.800) | coding (148/207 nt) | USA300HOU_RS10200 | hypothetical protein | |||||
Only 100 of 109 total aligned reads displayed.
TTTTCTTTGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCTAATAATCCTTGATT > USA300TCH1516_ALE/2023549‑2023729 | ttttCTTTGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACaa > 1:375204/1‑91 (MQ=255)aacagatatatatgattttgttcaatcaagagaaagatTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACaa > 1:596861‑M1/39‑91 (MQ=255) tttCTTTGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAAt > 1:1316246/1‑91 (MQ=255) ttCTTTGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATc > 1:2354111/1‑91 (MQ=255) ttCTTTGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATc > 1:3668903/1‑91 (MQ=255) ttCTTTGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGCCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATc > 1:4136822/1‑91 (MQ=255) tCTTTGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCt < 1:2399025/91‑1 (MQ=255) tCTTTGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCt < 1:1779951/91‑1 (MQ=255) cTTTGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCtt > 1:2675143/1‑91 (MQ=255) cTTTGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCtt > 1:473286/1‑91 (MQ=255) tttGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCttt > 1:1795834/1‑91 (MQ=255) tGTAATTAGTCAAAATTCCCACTCCTTTTCGTGTCGC‑AATTGTCCTAAATCGTCTTCAATAGCTGTCACTTCACTTGGCGACAATCTTtct < 1:2247402/91‑1 (MQ=255) tGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTtct < 1:2247297/91‑1 (MQ=255) tAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTctct > 1:2320187/1‑91 (MQ=255) tAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTctct > 1:1707640/1‑91 (MQ=255) aaTTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCtt > 1:1054343/1‑91 (MQ=255) gTCAAAATTCCCACTCCTATTCGTGTCGG‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCttgattg < 1:1148237/91‑1 (MQ=255) gTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCttgattg < 1:3556522/91‑1 (MQ=255) gTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCttgattg < 1:1147628/91‑1 (MQ=255) gTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCttgattg > 1:4001433/1‑91 (MQ=255) gTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCttgattg > 1:3999520/1‑91 (MQ=255) gTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCttcattg > 1:3455163/1‑91 (MQ=255) gTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCttaattg > 1:3459632/1‑91 (MQ=255) aaaaTTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAAc < 1:3233044/91‑1 (MQ=255) aaaaTTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAAc < 1:3308638/91‑1 (MQ=255) gttcaatcaagagaaagatTGTCGCCAAGTG‑‑‑‑‑AAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAAt > 1:973290‑M1/20‑91 (MQ=255) gttcaatcaagagaaagatTGTCGCCAAGTG‑‑‑‑‑AAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAAt > 1:973192‑M1/20‑91 (MQ=255) attttgttcaatcaagagaaagattgtcgccaagtgaagtgacagctattgctgacgcttcacttggcgacaATCTTTCTCTTGATTGAAc > 1:973192‑M2/73‑91 (MQ=255) attttgttcaatcaagagaaagattgtcgccaagtgaagtgacagctattgctgacgcttcacttggcgacaATCTTTCTCTTGATTGAAc > 1:973290‑M2/73‑91 (MQ=255) cACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCat < 1:4017372/91‑1 (MQ=255) aCTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCata > 1:2001403/1‑91 (MQ=255) aCTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCata > 1:4102797/1‑91 (MQ=255) aCTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCata > 1:1546659/1‑91 (MQ=255) tCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCatata < 1:739905/91‑1 (MQ=255) ccTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCatatat < 1:2661312/91‑1 (MQ=255) ttCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCt > 1:2841604/1‑91 (MQ=255) cGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGt > 1:1870038/1‑91 (MQ=255) cGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGt > 1:4075573/1‑91 (MQ=255) gtgtCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGtt < 1:1522337/91‑1 (MQ=255) gtgtCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGtt < 1:3372821/91‑1 (MQ=255) ttgtcgccaagtgaagtgacagctattgctgacgctttaggacaattgcgacaATCTTTCTCTTGATTGAACAAAATCATATATATCTGtt > 1:596861‑M2/54‑91 (MQ=255) gtcgccaagtgaagtgacagctattgctgacgctttaggacaattgcgacaATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTaa > 1:2830794‑M2/52‑91 (MQ=255) tcgccaagtgaagtgacagctattgctgacgctttaggacaattgcgacaATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAAt > 1:723528‑M2/51‑91 (MQ=255) CGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAAtt < 1:1584362‑M1/91‑1 (MQ=255) cgccaagtgaagtgacagctattgctgacgctttaggacaattgcgacaATCTTTCTCTTGATTGCACAAAATCATATATATCTGTTAAtt > 1:3864911‑M2/50‑91 (MQ=255) cgccaagtgaagtgacagctattgctgacgctttaggacaattgcgacaATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAAtt > 1:2704623‑M2/50‑91 (MQ=255) GC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTc > 1:1510454‑M1/1‑91 (MQ=255) C‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCt > 1:2450872‑M1/1‑91 (MQ=255) aTTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAAttcttc < 1:2246383/91‑1 (MQ=255) tGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAAttcttctt > 1:1443796/1‑91 (MQ=255) gaagtgacagctattgctgacgctttaggacaattgcgacaATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCa > 1:1222973‑M2/42‑91 (MQ=255) ccTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTCATTCTTCTTCAt < 1:3181224/91‑1 (MQ=255) aaaGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTg < 1:1413109/91‑1 (MQ=255) gTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCAttt < 1:2011702/91‑1 (MQ=255) gTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCAttt > 1:165390/1‑91 (MQ=255) cAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCAttttt < 1:2375001/91‑1 (MQ=255) cAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCAttttt > 1:4131306/1‑91 (MQ=255) cAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCAttttt < 1:2374972/91‑1 (MQ=255) cAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCAttttt > 1:4131147/1‑91 (MQ=255) cAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCAttttt > 1:4131086/1‑91 (MQ=255) aGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTta > 1:1438222/1‑91 (MQ=255) aGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTta > 1:1438295/1‑91 (MQ=255) gCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTtat > 1:2863633/1‑91 (MQ=255) cAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTtata > 1:2624418/1‑91 (MQ=255) cAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTtata > 1:2517359/1‑91 (MQ=255) cAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTtata < 1:2518215/91‑1 (MQ=255) cAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTtata > 1:3144045/1‑91 (MQ=255) cAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTtata > 1:3143934/1‑91 (MQ=255) cAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTtata < 1:831223/91‑1 (MQ=255) aaTAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTatat < 1:422681/91‑1 (MQ=255) aTAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATAtt > 1:1978846/1‑91 (MQ=255) tAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATAttt < 1:3937653/91‑1 (MQ=255) tAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATAttt < 1:962129/91‑1 (MQ=255) tAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATAttt < 1:1136608/91‑1 (MQ=255) cTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTc < 1:3693743/91‑1 (MQ=255) cTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTc < 1:1526718/91‑1 (MQ=255) cTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTc < 1:1527612/91‑1 (MQ=255) cTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTc > 1:115527/1‑91 (MQ=255) tGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCa > 1:518451/1‑91 (MQ=255) tcacttcactTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAgg > 1:3350601/1‑91 (MQ=255) tcacttcactTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAgg > 1:313865/1‑91 (MQ=255) cacttcacttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGa < 1:3326318/91‑1 (MQ=255) acttcacttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGAt < 1:2809892/91‑1 (MQ=255) acttcacttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGAt > 1:2233822/1‑91 (MQ=255) cttcacttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATc > 1:1120180/1‑91 (MQ=255) ttcacttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCt < 1:885560/91‑1 (MQ=255) tcacttGGCGACAATCTTTCTCTTGATTGAACACAATCATATATATATGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCta > 1:3296874/1‑91 (MQ=255) tcacttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCta > 1:631633/1‑91 (MQ=255) acttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTTTTCTTCATTTGCATTTTTATATTTTTCAGGATCtaat < 1:3497631/91‑1 (MQ=255) acttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCtaat < 1:1249153/91‑1 (MQ=255) acttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCtaat < 1:1248142/91‑1 (MQ=255) acttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCtaat < 1:1247943/91‑1 (MQ=255) cttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTGAGGATCtaata > 1:3758051/1‑91 (MQ=255) cttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTGAGGATCtaata > 1:3757816/1‑91 (MQ=255) cttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCtaata < 1:3011328/91‑1 (MQ=255) cttGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCtaata < 1:951205/91‑1 (MQ=255) gacaATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCTAATAATCCtt < 1:3141142‑M2/87‑1 (MQ=255) caATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCTAATAATCCTTGa > 1:389626‑M2/3‑91 (MQ=255) caATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCTAATAATCCTTGa > 1:2967830‑M2/3‑91 (MQ=255) aTCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCTAATAATCCTTGAtt > 1:285393/1‑91 (MQ=255) | TTTTCTTTGTAATTAGTCAAAATTCCCACTCCTATTCGTGTCGC‑AATTGTCCTAAAGCGTCAGCAATAGCTGTCACTTCACTTGGCGACAATCTTTCTCTTGATTGAACAAAATCATATATATCTGTTAATTCTTCTTCATTTGCATTTTTATATTTTTCAGGATCTAATAATCCTTGATT > USA300TCH1516_ALE/2023549‑2023729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |