| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2252589 = | 109 (1.110) | 19 (0.220) | 13/142 | NT | 17.6% | intergenic (+25/+127) | luxS/USA300HOU_RS11525 | S‑ribosylhomocysteine lyase/hypothetical protein |
| ? | USA300TCH1516_ALE | 2252638 = | 81 (0.930) | intergenic (+74/+78) | luxS/USA300HOU_RS11525 | S‑ribosylhomocysteine lyase/hypothetical protein | |||||
Only 100 of 149 total aligned reads displayed.
TCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTA > USA300TCH1516_ALE/2252548‑2252728 | actttttcatttgttcgattttttgactttgaagcataataAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCttttt > 1:1449740‑M1/42‑91 (MQ=255) ggTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTttat < 1:1163649/91‑1 (MQ=255) ggTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTttat > 1:429206/1‑91 (MQ=255) ggTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTttat > 1:428719/1‑91 (MQ=255) tACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTttatta < 1:3359741/91‑1 (MQ=255) tACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTttatta < 1:1288353/91‑1 (MQ=255) ttcatttgttcgattttttgactttgaagcataataAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTtattat > 1:3668561‑M1/37‑91 (MQ=255) aCAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTtattat > 1:191115/1‑91 (MQ=255) aCAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTtattat > 1:3523202/1‑91 (MQ=255) cAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATg > 1:4021551/1‑91 (MQ=255) aGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGc < 1:2847774/91‑1 (MQ=255) aGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGc > 1:359450/1‑91 (MQ=255) ggAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCt > 1:2469979/1‑91 (MQ=255) gAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCtt < 1:1874187/91‑1 (MQ=255) taaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAg < 1:1330756/91‑1 (MQ=255) taaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAg > 1:1331126/1‑91 (MQ=255) aaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGt < 1:1141525/91‑1 (MQ=255) aaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGt < 1:172686/91‑1 (MQ=255) aaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGt < 1:2309557/91‑1 (MQ=255) aaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGt < 1:495795/91‑1 (MQ=255) aatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTc > 1:1965335/1‑91 (MQ=255) tCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaa > 1:2427541/1‑91 (MQ=255) tCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaa > 1:1667381/1‑91 (MQ=255) tCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaa > 1:1667259/1‑91 (MQ=255) tCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaa < 1:380702/91‑1 (MQ=255) tAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaaaaa < 1:2077124/91‑1 (MQ=255) aGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaaaaaa > 1:2038460/1‑91 (MQ=255) tcaatcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATc > 1:1441692/1‑91 (MQ=255) tcaatcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATc > 1:1922352/1‑91 (MQ=255) atcaaGTTAGTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGaa < 1:3971087/91‑1 (MQ=255) aaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACaa > 1:1433970/1‑91 (MQ=255) aGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACaaa > 1:857211/1‑91 (MQ=255) gTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAAt < 1:1238844/91‑1 (MQ=255) ttAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATg > 1:1759444/1‑91 (MQ=255) ataataaaaagcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaa > 1:3668561‑M2/56‑91 (MQ=255) ataataaaaagcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaa > 1:3669476‑M2/56‑91 (MQ=255) aaTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaa > 1:1208706/1‑91 (MQ=255) aaTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaa > 1:462249/1‑91 (MQ=255) tCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaaaa < 1:2998966/91‑1 (MQ=255) cAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACCAATGaaaaa > 1:3968715/1‑91 (MQ=255) aGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAg > 1:315903/1‑91 (MQ=255) aaaagcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTa > 1:483617‑M2/50‑91 (MQ=255) AAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTa < 1:102020‑M1/91‑1 (MQ=255) AAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTaa < 1:2902353‑M1/91‑1 (MQ=255) aagcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAATAAGTaaa > 1:2077055‑M2/48‑91 (MQ=255) agcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTaaaa > 1:3046614‑M2/47‑91 (MQ=255) gcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAAt > 1:4044579‑M2/46‑91 (MQ=255) cagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATc > 1:829415‑M2/45‑91 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATc < 1:1247654‑M1/91‑1 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATc < 1:276529‑M1/91‑1 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTT‑ATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCt < 1:1608404‑M1/91‑1 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTCAAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATc < 1:1128411‑M1/91‑1 (MQ=255) gttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCtt > 1:3466918‑M2/43‑91 (MQ=255) GTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCtt < 1:3808185‑M1/91‑1 (MQ=255) TCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCttt > 1:2895420‑M1/1‑91 (MQ=255) ggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTaa > 1:1435282‑M2/40‑91 (MQ=255) ggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTaa > 1:1435476‑M2/40‑91 (MQ=255) gacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAAc > 1:200122‑M2/39‑91 (MQ=255) aatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACAtt > 1:2412681‑M2/36‑91 (MQ=255) aaTGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACAtt > 1:1040828/1‑91 (MQ=255) aaTGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACAtt < 1:1372051/91‑1 (MQ=255) atggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACAttt > 1:406267‑M2/35‑91 (MQ=255) gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGt > 1:2717391/1‑91 (MQ=255) gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGt > 1:2717198/1‑91 (MQ=255) gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGt > 1:2584645/1‑91 (MQ=255) gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGt < 1:669061/91‑1 (MQ=255) aTTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTc < 1:2328991/91‑1 (MQ=255) ttttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTcc < 1:636604/91‑1 (MQ=255) ttttACAATCGCCATTGTCCAACTGCTTTTTATGATGCTTCAAAGTCAAAAAATCGAACCAATGAAAAAGTAAAATCTTTAACATTTGTcc < 1:3688824/91‑1 (MQ=255) tttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCg < 1:669999/91‑1 (MQ=255) tttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCg > 1:3013868/1‑91 (MQ=255) aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatt < 1:1864890/91‑1 (MQ=255) aTCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttat > 1:2546698/1‑91 (MQ=255) aTCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttat < 1:2511054/91‑1 (MQ=255) tCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttatt > 1:2025066/1‑91 (MQ=255) cGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttattt < 1:1203557/91‑1 (MQ=255) gCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTg < 1:703198/91‑1 (MQ=255) gCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTg > 1:596911/1‑91 (MQ=255) cATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTgag > 1:4114339/1‑91 (MQ=255) cATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTgag < 1:335007/91‑1 (MQ=255) tCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCa < 1:216901/91‑1 (MQ=255) ccAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc < 1:2861393/91‑1 (MQ=255) ccAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc < 1:2861039/91‑1 (MQ=255) cAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt > 1:658377/1‑91 (MQ=255) cAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt < 1:1007077/91‑1 (MQ=255) cAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt < 1:2109191/91‑1 (MQ=255) aaCTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACta < 1:2640498/91‑1 (MQ=255) aaCTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACta > 1:3839448/1‑91 (MQ=255) aaCTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACta < 1:1849354/91‑1 (MQ=255) aaCTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACta < 1:3485576/91‑1 (MQ=255) actgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACtat < 1:1745637‑M2/82‑1 (MQ=255) tgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATaa > 1:405469‑M2/8‑91 (MQ=255) ttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAAttt < 1:1201481‑M2/87‑1 (MQ=255) ttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAAttt > 1:3125724‑M2/5‑91 (MQ=255) tTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCtt > 1:1238932‑M2/2‑91 (MQ=255) tTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCtt < 1:1554723‑M2/90‑1 (MQ=255) tTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCtt < 1:671458‑M2/90‑1 (MQ=255) tattatGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTa > 1:3895457/1‑91 (MQ=255) tattatGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTa < 1:323603/91‑1 (MQ=255) tattatGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTa < 1:791575/91‑1 (MQ=255) | TCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTA > USA300TCH1516_ALE/2252548‑2252728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |