| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2357390 | 64 (0.650) | 12 (0.140) | 8/140 | NT | 15.6% | intergenic (‑340/+198) | ecfA1/rplQ | Energy‑coupling factor transporter ATP‑binding protein EcfA1/50S ribosomal protein L17 |
| ? | USA300TCH1516_ALE | = 2357406 | 74 (0.860) | intergenic (‑356/+182) | ecfA1/rplQ | Energy‑coupling factor transporter ATP‑binding protein EcfA1/50S ribosomal protein L17 | |||||
Only 100 of 135 total aligned reads displayed.
TGAAATTGATCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAGTTGATGGGGT > USA300TCH1516_ALE/2357316‑2357496 | tGAAATTGATCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCa < 1:2112968/91‑1 (MQ=255) aaaTTGATCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCAta > 1:2396894‑M2/1‑89 (MQ=255) aaTTGATCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCAtaa < 1:3246713‑M2/91‑4 (MQ=255) gatttaaagcgtgaacttaacaaacttatgattgggtgcgcgcttttttattgaataaaatATCGGACTTAAAAAGATTTCTGTTCATAAg > 1:3544652‑M1/62‑91 (MQ=255) aTTGATCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCAtaag > 1:819370‑M2/1‑87 (MQ=255) aTTGATCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCAtaag > 1:820196‑M2/1‑87 (MQ=255) ttGATCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCAtaagt < 1:3357287‑M2/91‑6 (MQ=255) atttaaagcgtgaactcaacaaacttatgatggggtgcgcgcttttttattgaataaaatATCGGACTTAAAAACATTTCTGTTCATAAGt > 1:2883593‑M1/61‑91 (MQ=255) ttaaagcgtgaactcaacaaacttatgatggggtgcgcgcttttttattgaataaaatATCGGACTTAAAAACATTTCTGTTCATAAGTcc > 1:2671129‑M1/59‑91 (MQ=255) gATCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCAtaagtcc > 1:876411‑M2/1‑84 (MQ=255) tCATACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCAtaagtccga > 1:3738615‑M2/1‑82 (MQ=255) tCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCAtaagtccga < 1:124558‑M2/91‑10 (MQ=255) tCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCAtaagtccga > 1:3551055‑M2/1‑82 (MQ=255) tCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCAtaagtccga < 1:2494384‑M2/91‑10 (MQ=255) tCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCAtaagtccga < 1:2148132‑M2/91‑10 (MQ=255) aaagcgtgagctcaacaaacttatgatggggtgcgcgcttttttattgaataaaatATCGGACTTAAAAACATTTCTGTTCATAAGTCCGa > 1:1259741‑M1/57‑91 (MQ=255) gcgtgaactcaacaaacttatgatggggtgcgcgcttttttattgaataaaatATCGGACTTAAAAACATTTCTGTTCATAAGTCCGatat > 1:938729‑M1/54‑91 (MQ=255) gcgtgaactcaacaaacttatgatggggtgcgcgcttttttattgaataaaatATCGGACTTAAAAACATTTCTGTTCATAAGTCCGatat > 1:935204‑M1/54‑91 (MQ=255) tAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATAtttt < 1:1739717/91‑1 (MQ=255) aGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTa > 1:1918709/1‑91 (MQ=255) gCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGCAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTAt > 1:3288685/1‑91 (MQ=255) gCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTAt > 1:3083191/1‑91 (MQ=255) gCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTAt < 1:284097/91‑1 (MQ=255) cTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTAtt > 1:802961/1‑91 (MQ=255) ttCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTc > 1:1402620/1‑91 (MQ=255) catcatATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCaa < 1:501896/91‑1 (MQ=255) catcatATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCaa < 1:507357/91‑1 (MQ=255) tcatATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATa > 1:741603/1‑91 (MQ=255) catATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATaa < 1:4110293/91‑1 (MQ=255) catATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATaa < 1:3645788/91‑1 (MQ=255) atTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATaaaaa < 1:2700265/91‑1 (MQ=255) tttttAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATaaaaaa < 1:2136093/91‑1 (MQ=255) tttttAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATaaaaaa < 1:1450010/91‑1 (MQ=255) tttttAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATaaaaaa > 1:2646965/1‑91 (MQ=255) tttttAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATaaaaaa > 1:2647141/1‑91 (MQ=255) ttttAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAg < 1:3797281/91‑1 (MQ=255) cGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCAccc > 1:1654056/1‑91 (MQ=255) aCTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCcat < 1:2212901/91‑1 (MQ=255) cAAAACAGTAAATATAAAGAAATCGCACTTAAAAACATTACTGTTCATAAGTCTGATATTTTATTCAATAAAAAAGCGCGCACCCcatcat < 1:3861663/91‑1 (MQ=39) cAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATATGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCcatcat < 1:3603753/91‑1 (MQ=255) cAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCcatcat < 1:612073/91‑1 (MQ=255) aaaaaGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATaa > 1:4013960/1‑91 (MQ=255) aaaaaGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATaa > 1:1399305/1‑91 (MQ=255) aaaGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGt > 1:3346588/1‑91 (MQ=255) aaGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGtt < 1:575775/91‑1 (MQ=255) agtaagtaTAAAGAAATCGGACTTATAAACATTTCTGTTTATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGttt < 1:3864046/91‑1 (MQ=255) gTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTttg < 1:3805225/91‑1 (MQ=255) gTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTttg < 1:860088/91‑1 (MQ=255) tAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTttgt < 1:1469113/91‑1 (MQ=255) tAAATATAAAGAAATCAGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTttgt < 1:1092162/91‑1 (MQ=255) aaaTATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTttgtt < 1:373648/91‑1 (MQ=255) aaaTATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTttgtt < 1:3302349/91‑1 (MQ=255) tataAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAGGCGCGCACCCCATCATAAGTTTGTTGAg > 1:1519152/1‑91 (MQ=255) tataAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAGGCGCGCACCCCATCATAAGTTTGTTGAg > 1:1519168/1‑91 (MQ=255) tataAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAg < 1:3918297/91‑1 (MQ=255) aaaGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTc < 1:213818/91‑1 (MQ=255) aaaTCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGc < 1:1912608/91‑1 (MQ=255) aaaTCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGc < 1:3054729/91‑1 (MQ=255) aaTCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCt < 1:1370236/91‑1 (MQ=255) aaTCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCt < 1:3657431/91‑1 (MQ=255) aaTCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCt < 1:1678537/91‑1 (MQ=255) aTCGGACTTAAAAACATTTCTGTTCAtaagtccgatttctttatatttacttttttgagtgcgaatctaaaaatatgatgaagctagtttg < 1:3726319‑M2/91‑66 (MQ=255) ATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCtt > 1:2673535‑M1/1‑91 (MQ=255) ATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCtt > 1:2851918‑M1/1‑91 (MQ=255) ATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCtt > 1:497669‑M1/1‑91 (MQ=255) TCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCttt > 1:2086921‑M1/1‑91 (MQ=255) TCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGATCACGCttt > 1:2086757‑M1/1‑91 (MQ=255) CGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTa < 1:1186206‑M1/91‑1 (MQ=255) CGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTa < 1:3789180‑M1/91‑1 (MQ=255) GGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTaa < 1:3841620‑M1/91‑1 (MQ=255) gACTTAAAAACATTTCTGTTCAtaagtccgatttctttatatttacttttttgagtgcgaatctaaaaatatgatgaagctagtttgatca < 1:2368019‑M2/91‑70 (MQ=255) GACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTaaa > 1:3942061‑M1/1‑91 (MQ=255) GACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTaaa > 1:3812613‑M1/1‑91 (MQ=255) aCTTAAAAACATTTCTGTTCAtaagtccgatttctttatatttacttttttgagtgcgaatctaaaaatatgatgaagctagtttgatcaa < 1:3999484‑M2/91‑71 (MQ=255) aCTTAAAAACATTTCTGTTCAtaagtccgatttctttatatttacttttttgagtgcgaatctaaaaatatgatgaagctagtttgatcaa < 1:3999808‑M2/91‑71 (MQ=255) ACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAAt > 1:1848887‑M1/1‑91 (MQ=255) cTTAAAAACATTTCTGTTCAtaagtccgatttctttatatttacttttttgagtgcgaatctaaaaatatgatgaagctagtttgatcaat < 1:1141309‑M2/91‑72 (MQ=255) CTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATc < 1:2506250‑M1/91‑1 (MQ=255) CTTAAAAACATTTCTGTTCATAAGTCCGATATCTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATc > 1:4102705‑M1/1‑91 (MQ=255) tAAAAACATTTCTGTTCAtaagtccgatttctttatatttacttttttgagtgcgaatctaaaaatatgatgaagctagtttgatcaattt < 1:143649‑M2/91‑74 (MQ=255) TAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCtt > 1:332874‑M1/1‑91 (MQ=255) TAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCtt > 1:1283487‑M1/1‑91 (MQ=255) ttcaCATTTCTGTTCAGAAGTCCGATATCGTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCttta < 1:899213/88‑1 (MQ=255) aaaaCATTTCTGTTCAtaagtccgatttctttatatttacttttttgagtgcgaatctaaaaatatgatgaagctagtttgatcaatttca < 1:1062656‑M2/91‑76 (MQ=255) aaaaCATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCttta > 1:3249858/1‑91 (MQ=255) aaCGTTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCtttatt < 1:3350858/91‑1 (MQ=255) aaCATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCtttatt < 1:3238024/91‑1 (MQ=255) cATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCtttattta < 1:3030907/91‑1 (MQ=255) aTTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAg < 1:2497431/91‑1 (MQ=255) tCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGTTTTAAATCTTTATTTAGTTg > 1:1778812/1‑91 (MQ=255) tCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGTTTTAAATCTTTATTTAGTTg > 1:2849106/1‑91 (MQ=255) tCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAGTTg > 1:1594724/1‑91 (MQ=255) tCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAGTTg > 1:3167056/1‑91 (MQ=255) tCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAGTTg > 1:3167045/1‑91 (MQ=255) cTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCTCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAGTTGa < 1:3286255/91‑1 (MQ=255) cTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCGCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAGTTGa < 1:3286234/91‑1 (MQ=255) gTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAGTTGATg < 1:1762691/91‑1 (MQ=255) gTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAGTTGATg < 1:1206410/91‑1 (MQ=255) gTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAGTTGATg < 1:1206363/91‑1 (MQ=255) cATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAGTTGATgggg < 1:4026543/91‑1 (MQ=255) | TGAAATTGATCAAACTAGCTTCATCATATTTTTAGATTCGCACTCAAAAAAGTAAATATAAAGAAATCGGACTTAAAAACATTTCTGTTCATAAGTCCGATATTTTATTCAATAAAAAAGCGCGCACCCCATCATAAGTTTGTTGAGTTCACGCTTTAAATCTTTATTTAGTTGATGGGGT > USA300TCH1516_ALE/2357316‑2357496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |