| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 280894 | 103 (1.050) | 11 (0.130) +TTAATTGGGAGTA |
7/134 | NT | 11.2% | intergenic (‑146/+11) | USA300HOU_RS01225/USA300HOU_RS01230 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 855632 = | 105 (1.070) | intergenic (+163/‑597) | zipA_1/cggR | Cell division protein ZipA/Central glycolytic genes regulator | |||||
Only 100 of 132 total aligned reads displayed.
TATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGT > USA300TCH1516_ALE/855542‑855721 | tATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTgg < 1:3939110/91‑1 (MQ=255) aTTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTGTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTggg < 1:3598291/91‑1 (MQ=255) aTTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTggg < 1:1972516/91‑1 (MQ=255) ttttATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGAc > 1:1618702/1‑91 (MQ=255) ataATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGaa < 1:3758790/91‑1 (MQ=255) tGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGat > 1:613978/1‑91 (MQ=255) ttAATTAGGGGAGAGATGATACTTAAATAGTTATTTATTTATTTTACGGATAGTGGAATTTATTTTGAGTGAGGTGGGACAGAAATGatat < 1:3400117/91‑1 (MQ=255) aaTTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATAttt > 1:3938105/1‑91 (MQ=255) aaTTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATAttt > 1:3938043/1‑91 (MQ=255) aaTTAGGGGAGAGATGATACTTAAATAGATAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATAttt > 1:3116856/1‑91 (MQ=255) aTTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATAtttt < 1:1394174/91‑1 (MQ=255) aGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGGAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGc > 1:2847395/1‑91 (MQ=255) aGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGc > 1:793089/1‑91 (MQ=255) aGGGGAGAGATGATACTTAAATAGTGAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGc < 1:3847450/91‑1 (MQ=255) ggggAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCa < 1:3035142/91‑1 (MQ=255) ggggAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCa < 1:3035466/91‑1 (MQ=255) gggAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaa < 1:2796474/91‑1 (MQ=255) gggAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaa > 1:1444278/1‑91 (MQ=255) gggAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaa < 1:2540567/91‑1 (MQ=255) ggAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaaa > 1:1449263/1‑91 (MQ=255) agagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAat < 1:2034384/91‑1 (MQ=255) agagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAat > 1:1573256/1‑91 (MQ=255) agagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAat > 1:1573244/1‑91 (MQ=255) agagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAat > 1:1573243/1‑91 (MQ=255) gatgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAattta < 1:3065835/91‑1 (MQ=255) gatgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAattta > 1:2895941/1‑91 (MQ=255) actcccaattaaaaaacagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAatttat > 1:2260544‑M2/62‑91 (MQ=255) tgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatttatt < 1:1476706/91‑1 (MQ=255) tgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatttatt > 1:534137/1‑91 (MQ=255) tgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatttatt < 1:1082787/91‑1 (MQ=255) gatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatttattt > 1:684935/1‑91 (MQ=255) gatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatttattt > 1:775189/1‑91 (MQ=255) atACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtc < 1:3334763/91‑1 (MQ=255) atACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtc > 1:3002774/1‑91 (MQ=255) tACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcg > 1:216202/1‑91 (MQ=255) tACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcg < 1:110372/91‑1 (MQ=255) aCTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgt > 1:1769547/1‑91 (MQ=255) ttAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgtcg < 1:2338096/91‑1 (MQ=255) tAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTcgtcgt > 1:670150/1‑91 (MQ=255) aaaTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCgtcgtc > 1:1127460/1‑91 (MQ=255) aTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTccc > 1:3025015/1‑91 (MQ=255) aTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTCCGTCGTccc > 1:3720631/1‑91 (MQ=255) tagttagtTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCa < 1:4137098/91‑1 (MQ=255) tagttagtTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCa > 1:193050/1‑91 (MQ=255) agttagttATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAc < 1:2647982/91‑1 (MQ=255) aaacagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCAc > 1:806688‑M2/49‑91 (MQ=255) ttagttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAccc < 1:717793/91‑1 (MQ=255) acagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCacca > 1:1157847‑M2/47‑90 (MQ=255) acagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCacca > 1:1157705‑M2/47‑90 (MQ=255) acagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCacca > 1:1157185‑M2/47‑90 (MQ=255) tagttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAcccc < 1:4048369/91‑1 (MQ=255) tagttaTTTATTATACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAcccc > 1:3196878/1‑91 (MQ=255) cagccatgacaacgtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCcaccac > 1:3181955‑M2/46‑89 (MQ=255) agttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCa < 1:179331/91‑1 (MQ=255) agccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCccaccaca > 1:1354285‑M2/45‑88 (MQ=255) gttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCaa > 1:904760/1‑91 (MQ=255) ttatttatTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAc > 1:419109/1‑91 (MQ=255) ttatttatTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAc < 1:909681/91‑1 (MQ=255) atttatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACtt < 1:1000989/91‑1 (MQ=255) tatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTcaa > 1:3159370/1‑89 (MQ=255) tatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCa > 1:1273455/1‑91 (MQ=255) tatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCa < 1:909361/91‑1 (MQ=255) ttACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGc > 1:3562686/1‑91 (MQ=255) tACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGcc > 1:1658019/1‑91 (MQ=255) aCGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCt > 1:1194718/1‑91 (MQ=255) cGGATAGTGAAAGTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCCCCCCAACTTCCATTGCCTg < 1:2057633/91‑1 (MQ=255) ggATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGt < 1:3290718/91‑1 (MQ=255) ggATAGCGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGt < 1:568423/91‑1 (MQ=255) aTAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAg < 1:2436304/91‑1 (MQ=255) aGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGaa < 1:2551053/91‑1 (MQ=255) gTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGaaa > 1:347541/1‑91 (MQ=255) gTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGaaa > 1:1773761/1‑91 (MQ=255) gAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAAtt < 1:3407031/91‑1 (MQ=255) gAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAAtt > 1:2118385/1‑91 (MQ=255) aaTTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTgg > 1:2111754/1‑91 (MQ=255) atttatttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGa > 1:1285881/1‑91 (MQ=255) tatttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAAt < 1:2560661/91‑1 (MQ=255) atttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGatttc < 1:2597095/91‑5 (MQ=255) atttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATc < 1:3761504/91‑1 (MQ=255) atttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATc < 1:1915322/91‑1 (MQ=255) atttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATc < 1:4002046/91‑1 (MQ=255) atttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATc < 1:4002084/91‑1 (MQ=255) ttttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc > 1:611107/1‑91 (MQ=255) ttttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc > 1:469907/1‑91 (MQ=255) tcttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc < 1:501912/89‑1 (MQ=255) tttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCa > 1:4097837/1‑91 (MQ=255) ttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCaa > 1:3684624/1‑91 (MQ=255) ttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCaa < 1:3747809/91‑1 (MQ=255) tgagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAAt < 1:1744247/91‑1 (MQ=255) gagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGGAATCCAAtt > 1:1283718/1‑91 (MQ=255) gagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAAtt > 1:1283652/1‑91 (MQ=255) tgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTtct > 1:122145/1‑91 (MQ=255) ggTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTa > 1:1940034/1‑91 (MQ=255) gTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTAt < 1:3639522/91‑1 (MQ=255) tGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 1:1331668/91‑1 (MQ=255) tGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 1:3696538/91‑1 (MQ=255) tGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACCTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 1:2599484/91‑1 (MQ=255) ctggACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 1:1767415/89‑1 (MQ=255) gggACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGt < 1:3649562/91‑1 (MQ=255) gggACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGt < 1:3649772/91‑1 (MQ=255) | TATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGT > USA300TCH1516_ALE/855542‑855721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |