| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 705329 | 99 (1.010) | 13 (0.150) | 8/142 | NT | 13.3% | intergenic (+1079/+81) | nhaK_1/mntA | Sodium, potassium, lithium and rubidium/H(+) antiporter/Manganese‑binding lipoprotein MntA |
| ? | USA300TCH1516_ALE | = 705368 | 81 (0.930) | intergenic (+1118/+42) | nhaK_1/mntA | Sodium, potassium, lithium and rubidium/H(+) antiporter/Manganese‑binding lipoprotein MntA | |||||
Only 100 of 121 total aligned reads displayed.
TATTTAACGCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCATTTTG > USA300TCH1516_ALE/705279‑705458 | tatTTAACGCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGc < 1:2223190‑M2/91‑2 (MQ=255) aCGCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaac < 1:2408796‑M2/91‑8 (MQ=255) aCGCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaac < 1:2408211‑M2/91‑8 (MQ=255) aCGCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaac < 1:2408168‑M2/91‑8 (MQ=255) cGCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaaca > 1:67382‑M2/1‑83 (MQ=255) cGCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaaca > 1:1343315‑M2/1‑83 (MQ=255) cGCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaaca > 1:1343295‑M2/1‑83 (MQ=255) cGCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaaca > 1:67483‑M2/1‑83 (MQ=255) cGCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATGGGAGATACCAATATTTTAGGTTGcatcaaca > 1:1066623‑M2/1‑83 (MQ=255) gCACGATATGGGACTATTAGCCTTCTACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacat > 1:3851443‑M2/1‑82 (MQ=255) gCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacat < 1:21474‑M2/91‑10 (MQ=255) gCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacat < 1:772851‑M2/91‑10 (MQ=255) aCGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacatca > 1:3983622/1‑91 (MQ=255) cGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacatcaa > 1:3466801/1‑91 (MQ=255) cGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacatcaa > 1:2205035/1‑91 (MQ=255) cGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacatcaa > 1:2501546/1‑91 (MQ=255) cGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacatcaa > 1:3054238/1‑91 (MQ=255) atatGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAAtt < 1:3245248/91‑1 (MQ=255) tatGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTc > 1:1043362/1‑91 (MQ=255) tatGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTc < 1:1582445/91‑1 (MQ=255) tGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCAt < 1:1099358/91‑1 (MQ=255) gggACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATc > 1:1005258/1‑91 (MQ=255) ggACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCt < 1:2539485/91‑1 (MQ=255) ggACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCt < 1:3276702/91‑1 (MQ=255) aCTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTa < 1:1505388/91‑1 (MQ=255) aCTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTa < 1:3174002/91‑1 (MQ=255) cTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTAc > 1:1040496/1‑91 (MQ=255) tATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACt > 1:1072383/1‑91 (MQ=255) tATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACt > 1:1070515/1‑91 (MQ=255) ttAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTc > 1:1794109/1‑91 (MQ=255) ttAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTc < 1:2786571/91‑1 (MQ=255) ttAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTc > 1:368026/1‑91 (MQ=255) ttAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTc > 1:368410/1‑91 (MQ=255) tAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGTGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCa < 1:2622443/91‑1 (MQ=255) aGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCAt > 1:1590660/1‑91 (MQ=255) gACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAaca > 1:2221942/1‑91 (MQ=255) gACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAaca > 1:3996590/1‑91 (MQ=255) aCTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAacac > 1:1484264/1‑91 (MQ=255) cTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCTATATTTTAGGTTGCATCAGCATCAATTCATCTTACTTCATTAATAcaca < 1:694655/91‑1 (MQ=255) cTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAAcaca < 1:688420/91‑1 (MQ=255) tGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCg > 1:3171870/1‑91 (MQ=255) tATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGATGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCgtgt > 1:3292794/1‑91 (MQ=255) aTGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGtt > 1:2126707/1‑91 (MQ=255) tGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacataacaaagtcgaaggctaatagtcccatatcgtgcg < 1:2830498‑M2/91‑45 (MQ=255) gTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacataacaaagtcgaaggctaatagtcccatatcgtgcgt < 1:3480914‑M2/91‑46 (MQ=255) ttGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacataacaaagtcgaaggctaatagtcccatatcgtgcgtt < 1:457742‑M2/91‑47 (MQ=255) ttGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacataacaaagtcgaaggctaatagtcccatatcgtgcgtt < 1:457743‑M2/91‑47 (MQ=255) ttGATGTATGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTAtt < 1:2081668/91‑1 (MQ=255) gATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTc > 1:1318528/1‑91 (MQ=255) aTGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCa < 1:1785583/91‑1 (MQ=255) aTGTGTAGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacataacaaagtcgaaggctaatagtcccatatcgtgcgttaaa < 1:2172724‑M2/91‑50 (MQ=255) tgtgtgGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCAt < 1:1757112/91‑1 (MQ=255) gtgtgGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacataacaaagtcgaaggctaatagtcccatatcgtgcgttaaata < 1:4084643‑M2/91‑52 (MQ=255) gtgtgGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATg < 1:2811397/91‑1 (MQ=255) tgtgGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGc < 1:4078654/91‑1 (MQ=255) gtgGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacataacaaagtcgaaggctaatagtcccatatcgtgcgttaaatata < 1:794109‑M2/91‑54 (MQ=255) gtgGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCt < 1:3644338/91‑1 (MQ=255) tgGCCTAAAATATTGGAGATACCAATATTTTAGGTTGcatcaacataacaaagtcgaaggctaatagtcccatatcgtgcgttaaatatat < 1:3818228‑M2/91‑55 (MQ=255) ccTAAAATATTGGCGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCg > 1:507417/1‑91 (MQ=255) ccTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCg > 1:1014872/1‑91 (MQ=255) ccTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCg > 1:1014871/1‑91 (MQ=255) ccTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCg < 1:3935066/91‑1 (MQ=255) ccTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCg > 1:585354/1‑91 (MQ=255) ccTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCg > 1:585861/1‑91 (MQ=255) tAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCgtg < 1:2777247/91‑1 (MQ=255) aaaTATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTa > 1:1553876/1‑91 (MQ=255) aaaTATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTa > 1:1445612/1‑91 (MQ=255) aaaTATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTa < 1:3367688/91‑1 (MQ=255) aaTATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTAc > 1:3108243/1‑91 (MQ=255) atTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGt < 1:3805351/91‑1 (MQ=255) atTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGt > 1:1006430/1‑91 (MQ=255) atTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGt > 1:1007094/1‑91 (MQ=255) ttGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGtt < 1:2383764/91‑1 (MQ=255) ttGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGtt < 1:316278/91‑1 (MQ=255) ggAGGTACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTc < 1:3447757/91‑1 (MQ=255) ggAGATACCAATATTTTAGGTTGcatcaacataacaaagtcgaaggctaatagtcccatatcgtgcgttaaatatatattaccctcctatt < 1:3486096‑M2/91‑69 (MQ=255) ggAGATACCAATATTTTAGGTTGcatcaacataacaaagtcgaaggctaatagtcccatatcgtgcgttaaatatatattaccctcctatt < 1:3486147‑M2/91‑69 (MQ=255) ggAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTc > 1:114172/1‑91 (MQ=255) ggAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTc > 1:2066132/1‑91 (MQ=255) gagaTACCAATATTTTAGGTTGCATCAACATCAATTCCTCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCa < 1:2569050/91‑1 (MQ=255) gagaTACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCa < 1:2569223/91‑1 (MQ=255) agaTACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCaa > 1:3070573/1‑91 (MQ=255) tACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAatat < 1:3017520/91‑1 (MQ=255) tccAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATAtt < 1:320036/90‑1 (MQ=255) ccAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATAttt < 1:862430/91‑1 (MQ=255) tatTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGAtt > 1:3674986/1‑91 (MQ=255) ttttAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTtc > 1:369324/1‑91 (MQ=255) ttttAGGTTGCATCAACATCAATTCATCTGACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTtc < 1:3323528/91‑1 (MQ=255) tttAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTtca < 1:2042564/91‑1 (MQ=255) ttAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTtcat < 1:1120581/91‑1 (MQ=255) ttAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTtcat > 1:1127991/1‑91 (MQ=255) tAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTtcatc > 1:1830887/1‑91 (MQ=255) aGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTtcatca > 1:3012383/1‑91 (MQ=255) aGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTtcatca < 1:939953/91‑1 (MQ=255) ggTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTcatcat > 1:2266931/1‑91 (MQ=255) ggTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTcatcat > 1:9132/1‑91 (MQ=255) gTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCAtt < 1:1196677/91‑1 (MQ=255) ttGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCAttt < 1:1773251/91‑1 (MQ=255) tGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCAtttt < 1:3831682/91‑1 (MQ=255) gCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCATTTTg > 1:289198/1‑91 (MQ=255) | TATTTAACGCACGATATGGGACTATTAGCCTTCGACTTTGTTATGTTGATGTGTGGCCTAAAATATTGGAGATACCAATATTTTAGGTTGCATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCATTTTG > USA300TCH1516_ALE/705279‑705458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |