Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | USA300TCH1516_ALE | 1534622 | 1534655 | 34 | 2 [1] | [1] 2 | lapB | Lipopolysaccharide assembly protein B |
TTCATTAGCATCGCCGTGTTCTATTTCCAAACATCCAGTTGTATACATTAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAATTTTTTTCATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATC > USA300TCH1516_ALE/1534473‑1534637 | ttCATTAGCATCGCCGTGTTCTATTTCCAAACATCCAGTTGTATACATTAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAATTTTTTTCATTTTCATATAATGATTGTAAATACAAGt < 1:294895/149‑1 (MQ=255) tgtTCTATTTCCAAACATCCAGTTGTATACATTAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAATTTTTTTCATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATc < 1:123962/149‑1 (MQ=255) | TTCATTAGCATCGCCGTGTTCTATTTCCAAACATCCAGTTGTATACATTAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAATTTTTTTCATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATC > USA300TCH1516_ALE/1534473‑1534637 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |