Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000731	24860	24988	129	2 [1]	[1] 3	USA300HOU_pUSA300HOUMR0030	Sin recombinase

GAAACTGTGAATTATTTAAAAGAAAAAGACGTTCAGTTAATGATTACCAGCTTACCTATGATGAATGAAGTAATTGGCAATCCATTACTGGATAAGTTTATGAAAGATTTAATCATTCAAATATTAGCAATGGTTTCAGAACAAGAGAGAAATGAAAGTAAACGTCGACAAGCGCAAGGGATTCAAGTTGC  >  CP000731/24719‑24909                                                                                                                                             |                                                   gAAACTGTGAATTATTTAAAAGAAAAAGACGTTCAGTTAATGATTACCAGCTTACCTATGATGAATGAAGTAATTGGCAATCCATTACTGGATAAGTTTATGAAAGATTTAATCATTCAAATATTAGCAATGGTTTCAGaa                                                    >  1:887943/1‑141 (MQ=255)                                                   cTTACCTATGATGAATGAAGTAATTGGCAATCCATTACTGGATAAGTTTATGAAAGATTTAATCATTCAAATATTAGCAATGGTTTCAGAACAAGAGAGAAATGAAAGTAAACGTCGACAAGCGCAAGGGATTCAAGTTGc  >  1:352382/1‑141 (MQ=255)                                                                                                                                             |                                                   GAAACTGTGAATTATTTAAAAGAAAAAGACGTTCAGTTAATGATTACCAGCTTACCTATGATGAATGAAGTAATTGGCAATCCATTACTGGATAAGTTTATGAAAGATTTAATCATTCAAATATTAGCAATGGTTTCAGAACAAGAGAGAAATGAAAGTAAACGTCGACAAGCGCAAGGGATTCAAGTTGC  >  CP000731/24719‑24909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑