Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000731	2810	2899	90	2 [1]	[1] 2	USA300HOU_pUSA300HOUMR0004	hypothetical protein

TGATTTTTTTGTTGTAGTTATCATATATTGTTTCAGAAACTACAATTTCTTTTGTTTTTTCATTTTTATAAGCGTTATTAGCTATGTAGCCATATGCATTTTTATCATTTGCTTCTGTAGCTAGATATTTTAATTTAGAATTTTTGTCTTCTAGCT  >  CP000731/2669‑2824                                                                                                                                             |                tgATTTTTTTGTTGTAGTTATCATATATTGTTTCAGAAACTACAATTTCTTTTGTTTTTTCATTTTTATAAGCGTTATTAGCTATGTAGCCATATGCATTTTTATCATTTGCTTCTGTAGCTAGATATTTTAATTTAGAAt                 <  1:585333/141‑1 (MQ=255)                aGTTATCATATATTGTTTCAGAAACTACAATTTCTTTTGTTTTTTCATTTTTATAAGCGTTATTAGCTATGTAGCCATATGCATTTTTATAATTTGCTTCTGTAGCTAGATATTTTAATTTAGAATTTTTGTCTTCTAGCt  <  2:286674/141‑1 (MQ=255)                                                                                                                                             |                TGATTTTTTTGTTGTAGTTATCATATATTGTTTCAGAAACTACAATTTCTTTTGTTTTTTCATTTTTATAAGCGTTATTAGCTATGTAGCCATATGCATTTTTATCATTTGCTTCTGTAGCTAGATATTTTAATTTAGAATTTTTGTCTTCTAGCT  >  CP000731/2669‑2824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑