Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000731	2810	2899	90	2 [1]	[1] 2	USA300HOU_pUSA300HOUMR0004	hypothetical protein

TCTTCATTTTTATTTTGCAATTGTTCTAGAAAACTTATTTCTTTCTTGGTCATTTGTGATACTTCGATGTTTTTGCTTTTCAATTTTTCTTTTTGATTTTCTAGTAAAGAACTTTTTTGTTCTTCATTTGCGTAAGCATTAGAAAAATTCGCGCTAAATACCAGTA  >  CP000731/2875‑3040                          |                                                                                                                                             tCTTCATTTTTATTTTGCAATTGTTCTAGAAAACTTATTTCTTTCTTGGTCATTTGTGATACTTCGATGTTTTTGCTTTTCAATTTTTCTTTTTGATTTTCTAGTAAAGAACTTTTTTGTTCTTCATTTGCGTAAGCATTa                           >  1:234737/1‑141 (MQ=255)                          cTAGAAAACTTATTTCTTTCTTGGTCATTTGTGATACTTCGATGTTTTTGCTTTTCAATTTTTCTTTTTGATTTTCTAGTAAAGAACTTTTTTGTTCTTCATTTGCGTAAGCATTAGAAAAATTCGCGCTAAATACCAGTa  <  2:252665/141‑1 (MQ=255)                          |                                                                                                                                             TCTTCATTTTTATTTTGCAATTGTTCTAGAAAACTTATTTCTTTCTTGGTCATTTGTGATACTTCGATGTTTTTGCTTTTCAATTTTTCTTTTTGATTTTCTAGTAAAGAACTTTTTTGTTCTTCATTTGCGTAAGCATTAGAAAAATTCGCGCTAAATACCAGTA  >  CP000731/2875‑3040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑