| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1332949 | 116 (0.570) | 11 (0.070) | 8/124 | NT | 9.6% | intergenic (+159/+63) | hfq/bsaA_1 | RNA‑binding protein Hfq/Glutathione peroxidase BsaA |
| ? | USA300TCH1516_ALE | = 1332971 | 117 (0.740) | intergenic (+181/+41) | hfq/bsaA_1 | RNA‑binding protein Hfq/Glutathione peroxidase BsaA | |||||
Only 100 of 112 total aligned reads displayed.
TATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/1332842‑1332949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacgcttcatataaa‑gTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTTAATT < USA300TCH1516_ALE/1332971‑1332882 aATGATAAATAGAGATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAA < 1:1253630/90‑1TATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAA < 2:1693879/91‑1 ATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAA > 2:3797027/1‑91 ATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAA > 1:1515455/1‑91 TGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAA < 2:838872/91‑1 TGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAA > 1:2554313/1‑91 TGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAA > 1:2554436/1‑91 TGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAA > 2:1855365/1‑91 TGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAA > 2:2216519/1‑91 TGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAA > 2:789866/1‑91 TGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAA > 2:789232/1‑91 GATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA > 2:2065547/1‑91 GATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA > 2:2065112/1‑91 ATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAAC > 2:3837694/1‑91 TAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACG > 2:2724244/1‑91 TAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACG > 1:1139206/1‑91 AAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGC < 2:2512689/91‑1 AATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCT > 1:1601520/1‑91 AATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCT < 1:1421846/91‑1 AATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCT < 1:2089210/91‑1 TAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTC > 1:3646512/1‑91 TAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTC > 1:1922482/1‑91 TAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTC > 1:2445503/1‑91 TAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTC > 1:2444782/1‑91 GATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCAT > 1:2838173/1‑91 GATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCAT > 1:105826/1‑91 GATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCAT < 1:1651413/91‑1 ATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATA > 2:1746916/1‑91 ATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATA > 2:1929787/1‑91 ATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATA < 2:1036914/91‑1 ATATAGAAATAAAGTCATATGTGACATCAACTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATA > 2:752387/1‑91 TATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATAT < 1:1820814/91‑1 TATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATAT < 2:1506156/91‑1 TATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATAT > 2:239707/1‑91 TATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATAT > 1:3130449/1‑91 TATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATAT > 1:2894894/1‑91 TATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATAT > 1:2894795/1‑91 TATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATAT > 1:2894671/1‑91 ATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATt < 2:2256389/91‑2 ATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATA > 1:1995290/1‑91 TAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAA < 1:176970/91‑1 TAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAA < 1:106625/91‑1 TAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAA < 1:738397/91‑1 TAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAA < 1:719791/91‑1 AGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA < 1:491266/91‑1 GAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑G > 1:1823750/1‑91 GAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑G > 2:2153960/1‑91 GAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑G < 1:1673729/91‑1 ATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCT < 1:2722701/91‑1 TTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTT < 1:405063/91‑1 TTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTT < 2:635075/91‑1 TAAATTATGTTAAAATAACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTT < 2:533063/91‑1 TAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTT < 2:621910/91‑1 AAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTA < 2:2828251/91‑1 TGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATAT < 1:1149200/91‑1 GATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATG < 1:846099/91‑1 TGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTT < 1:2459741/91‑1 TGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTT < 1:2459716/91‑1 AAAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCAT > 2:1940851/1‑91 AAAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCAT > 2:1940304/1‑91 gAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATT > 2:292851/2‑91 AAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATT < 2:3786432/91‑1 AAACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATT > 2:2696575/1‑91 tctCTTCATATAAA‑GTTGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTG > 2:1213419/4‑91 ACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTG < 1:124832/91‑1 ACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTG < 2:364810/91‑1 ACGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTG < 1:1725162/91‑1 CGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGA > 2:3785120/1‑91 CGCTTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGA > 1:2590103/1‑91 TTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACA > 2:2250716/1‑91 TTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACA > 1:3816634/1‑91 TTCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACA > 1:3815871/1‑91 TCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACAT < 1:116508/91‑1 TCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACAT < 2:1293631/91‑1 TCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACAT < 2:387683/91‑1 TCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACAT < 1:405134/91‑1 TCATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCGTTATGGTATCTTGTCATTTGAACAT > 2:1405209/1‑91 CATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATC > 1:1222984/1‑91 CATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCACCTATTGTATCTTGTCATTTGAACATC > 2:2828358/1‑91 ATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCA < 2:3385062/91‑1 ATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCA < 2:2143245/91‑1 ATATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCA < 1:1697909/91‑1 TATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCAT > 1:2432941/1‑91 TATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCAT < 1:1035711/91‑1 TATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCAT < 2:2208537/91‑1 TATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCAT < 1:79788/91‑1 TATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCAT > 1:3050123/1‑91 TATAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCAT < 1:2088084/91‑1 TATAAA‑GTCGTATCATATATTGACTCGACCTTTATATAAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCAT < 1:2630307/91‑1 ATAAA‑GTCGTAGCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATT < 1:3587839/91‑1 TAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTT > 1:1749267/1‑91 TAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTT < 1:864001/91‑1 TAAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTT > 1:429015/1‑91 AAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTTA < 2:2213692/91‑1 AAA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTTA < 1:203692/91‑1 AA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTTAA < 2:3513504/91‑1 AA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTTAA < 2:1461066/91‑1 AA‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTTAA < 1:2263297/91‑1 A‑GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTTAAT < 2:3703335/91‑1 GTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTTAATT < 2:1479771/91‑1 TATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAA‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/1332842‑1332949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacgcttcatataaa‑gTCGTATCATATATTGACTCGACCTTTATATGAAGCGTTTTTATTACAAACATTCCTCTATTGTATCTTGTCATTTGAACATCATTTAATT < USA300TCH1516_ALE/1332971‑1332882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |