| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2679992 = | 218 (1.070) | 21 (0.130) | 8/130 | NT | 10.2% | intergenic (+44/+716) | ssaA2_4/USA300HOU_RS13810 | Staphylococcal secretory antigen ssaA2/hypothetical protein |
| ? | USA300TCH1516_ALE | 2681425 = | 193 (1.170) | intergenic (‑460/+119) | USA300HOU_RS13810/mvaA | hypothetical protein/3‑hydroxy‑3‑methylglutaryl‑coenzyme A reductase | |||||
Only 100 of 150 total aligned reads displayed.
GCTAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2680096‑2679992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaacttctatcacGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTAAAC > USA300TCH1516_ALE/2681425‑2681514 GCTAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATA > 2:910557/1‑91GCTAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATA < 2:3879505/91‑1 CTAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAA > 1:2780359/1‑91 CTAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAA > 2:3319273/1‑91 TAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAA < 2:156168/91‑1 TAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAA < 2:2195747/91‑1 TAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAA < 2:699887/91‑1 TAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAA < 2:532916/91‑1 TAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAA < 2:532890/91‑1 TAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAA < 2:2195746/91‑1 TAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAA < 2:3780732/91‑1 TAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAA < 2:3526838/91‑1 TAAAGATGAAATAATAGTTGAAGAAGAAATATACGTACAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAA < 2:1380718/91‑1 AAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAA < 2:900470/91‑1 AAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAA > 1:2642333/1‑91 AAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAA < 1:1227905/91‑1 AAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAA < 1:694503/91‑1 AAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAA < 1:1890820/91‑1 AAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAA < 2:1369156/91‑1 AGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAAC < 2:2614314/91‑1 AGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAAC > 1:2655392/1‑91 GATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACT > 2:173629/1‑91 tTGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTT < 2:2447608/90‑1 ATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTT < 2:2527724/91‑1 TGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTC > 1:522704/1‑91 TGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTC < 1:2205455/91‑1 TGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTC < 2:904175/91‑1 TGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTC < 2:904534/91‑1 AAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTA > 2:3156074/1‑91 AAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTA > 1:1708254/1‑91 AAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTA > 1:1618768/1‑91 AAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTA > 1:1612210/1‑91 AATAATAGTTGATGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTGTAT > 1:3060479/1‑91 AATAATAGTTGATGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTAT > 1:3060493/1‑91 AATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTAc > 1:2419954/1‑90 AATAATAGTTGAAGAAGAAATATACGCTCAATTACGGCAATTTGAAATTTGAAGAAGTAATAATATAATTTCATAAAATAAAAAATTCTAT > 2:2559480/1‑91 ATAATAGTTGAAGAAGAAATATACGTTCAATTATGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATC < 2:2698541/91‑1 ATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATC < 1:1069867/91‑1 ATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATC > 1:3737696/1‑91 ATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATC < 1:1883366/91‑1 AATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCAC > 2:1752858/1‑91 AATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCAC > 2:2273188/1‑91 AATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCAC < 2:73389/91‑1 CGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTAT < 2:2601553/91‑1 TTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTG < 1:395270/91‑1 TTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTG < 1:395054/91‑1 TTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTG < 2:79274/91‑1 ACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGAT < 2:3838006/91‑1 ACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGAT < 2:881660/91‑1 GCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGA < 2:2669738/91‑1 GCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGA < 1:508688/91‑1 GCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACGTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGA < 2:2669726/91‑1 GCAATTTGAAATTTGTAGAAGTAATAATATAATTGCATAAAATAAAAACTACTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGA < 2:3323075/91‑1 ATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGT < 1:987471/91‑1 ATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGT < 1:3650164/91‑1 ATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGT < 1:1343721/91‑1 TTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTT < 1:2468308/91‑1 TTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTT < 2:3318634/91‑1 AAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATG > 1:2162189/1‑91 AAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCAAATTAATTTATCTAAGCGCTACGATG > 1:3677436/1‑91 AAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTGTTGTTCATATTAATTTATCTAAGCGCTACGATG < 1:836642/91‑1 AAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGG > 1:3290622/1‑91 AAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGG > 1:1473656/1‑91 AACTTCTATCACGAACGCTTCAATTTCCTGTCTGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTGATTTATCTAAGCGCTACGATGGA > 2:3020073/1‑91 ACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGAC > 2:1158120/1‑91 ACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGAC < 1:2676938/91‑1 ACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGAC < 1:3316443/91‑1 ACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGAC > 1:3201123/1‑91 CTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACT < 1:2196158/91‑1 CTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACT < 2:1300934/91‑1 CTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACT > 1:228036/1‑91 CTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACT > 2:3147941/1‑91 TTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTG > 2:1091522/1‑91 TTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTG < 2:2183286/91‑1 TCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGA < 1:1053180/91‑1 TCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGA < 2:1953972/91‑1 TCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGA > 1:2961689/1‑91 TCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGA < 2:1302781/91‑1 CTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGAa > 2:3925498/1‑90 CTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGAC > 2:2903635/1‑91 CTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGAC > 1:2100841/1‑91 CTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGAC > 2:2734268/1‑91 CTATCACGAACGCTTCAATTTCCTGTAAGCGTGAGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTAAGATGGACTGAC > 2:2903636/1‑91 CTATCACGAACGCTTCAATCTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTTATATTGATTTATCTAAGAGCTACGATGGCCTGAC > 2:2457290/1‑91 TATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACT > 2:1637278/1‑91 TATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACT > 1:814566/1‑91 TATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACT < 1:1821035/91‑1 TATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACT < 1:205474/91‑1 ATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTT > 2:3086785/1‑91 TCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTA > 1:2312879/1‑91 TCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTA < 1:1490393/91‑1 TCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTA < 1:2939173/91‑1 TCACGAACGCTTCAATTTCCTGTATGCGCGTGATAGAAGTTTTTAATTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTA > 2:3268624/1‑91 CACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTAA < 1:3726590/91‑1 CACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTAA < 1:561886/91‑1 CACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTAA < 1:561775/91‑1 CACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATGTATCTAAGCGCTACGATGGACTGACTTAA < 2:3446227/91‑1 ACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTAAA < 2:2288648/91‑1 ACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTAAA > 1:1755540/1‑91 CGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTAAAC > 1:3280703/1‑91 GCTAAAGATGAAATAATAGTTGAAGAAGAAATATACGTTCAATTACGGCAATTTGAAATTTGTAGAAGTAATAATATAATTTCATAAAATAAAAACTTCTATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2680096‑2679992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaacttctatcacGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTAAAC > USA300TCH1516_ALE/2681425‑2681514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |