| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 492708 = | 109 (0.540) | 17 (0.100) | 9/128 | NT | 14.9% | intergenic (+130/+55) | sle1_1/USA300HOU_RS02345 | N‑acetylmuramoyl‑L‑alanine amidase sle1/hypothetical protein |
| ? | USA300TCH1516_ALE | 492758 = | 108 (0.660) | intergenic (+180/+5) | sle1_1/USA300HOU_RS02345 | N‑acetylmuramoyl‑L‑alanine amidase sle1/hypothetical protein | |||||
Only 100 of 104 total aligned reads displayed.
AACGGTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/492813‑492708‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgaccaatccttttCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTTTG > USA300TCH1516_ALE/492758‑492847 AACGGTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCAT < 2:3897617/91‑1AACGGTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCAT < 1:1097057/91‑1AACGGTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCAT > 1:2189934/1‑91AACGGTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCAT > 1:2189639/1‑91AACGGTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCAT > 1:1640619/1‑91AACGGTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCAT < 2:3215736/91‑1 ACGGTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATT > 2:2075320/1‑91 CGGTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTC > 1:417534/1‑91 GGTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCG < 1:644789/91‑1 GTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGA > 1:2095166/1‑91 GTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGA > 1:277869/1‑91 TGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGAC < 1:469651/91‑1 GCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACC < 2:3391497/91‑1 GCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACC < 2:765797/91‑1 CTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCA > 2:319708/1‑91 CTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCA < 2:1935116/91‑1 CTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCA > 1:1004895/1‑91 TAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAA < 2:2167461/91‑1 TAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAA < 2:385190/91‑1 TAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAA < 1:3566161/91‑1 TAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGGTCATTCGACCAA < 1:3040968/91‑1 TAGAGTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAA < 1:3289179/91‑1 GATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATC < 2:2290148/91‑1 GATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATC < 2:3806323/91‑1 GATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATC < 2:2921963/91‑1 ATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCC < 2:3527442/91‑1 TTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCCT < 1:59476/91‑1 TTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCCT > 2:2206571/1‑91 TTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCCT < 2:3583502/91‑1 TATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCCTT > 2:2333229/1‑91 TATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCCTT > 2:2333184/1‑91 ATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCGTTT > 1:3558307/1‑91 TGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTT > 1:2734550/1‑91 AAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAAT > 2:1260252/1‑91 AAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAAT > 2:3230114/1‑91 TGGTCGAACATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAG > 1:1688256/1‑91 TCGAACATAGAACATGAAGTTCATTCGACCAATCCTTTTCCGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCAC > 2:3343150/1‑91 CGAACATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACC > 1:1459624/1‑91 AACATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGT > 1:543896/1‑91 AACATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGT > 2:2926960/1‑91 AACATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGT > 2:2926769/1‑91 ACATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTT > 1:2334522/1‑91 ACATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTT > 1:1744426/1‑91 ACATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTT > 1:2446947/1‑91 CATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTT > 1:3767233/1‑91 CATAGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTT > 2:3625691/1‑91 AGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTT > 2:2430973/1‑91 AGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTT > 1:2515229/1‑91 AGAACATGAAGTTCATTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTACAAATAATCTACCACCGTTTGTT > 2:3012586/1‑91 TTCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACT > 1:3470189/1‑91 TCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTG > 2:3951397/1‑91 TCGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTG > 2:3811454/1‑91 CGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGC > 1:755022/1‑91 CGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGC > 1:3558998/1‑91 CGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGC > 1:2875247/1‑91 CGACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGC > 1:2875083/1‑91 GACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCC < 2:2915000/91‑1 GACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCC < 1:3866185/91‑1 GACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCC > 1:2541330/1‑91 ACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCA < 2:1942367/91‑1 ACCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCA < 2:1137085/91‑1 CCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCAC > 2:2019048/1‑91 CCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCAC > 2:3085851/1‑91 CCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCAC < 2:3463893/91‑1 CCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCAC < 1:496060/91‑1 CCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCAC < 2:551828/91‑1 CCAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCAC < 2:551910/91‑1 CCAATCCTTTGCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCAC < 2:3414090/91‑1 CAATCCTTTTCTGAATTTGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACT > 2:177662/1‑91 CAATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACT > 2:1382931/1‑91 AATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTG < 2:781944/91‑1 AATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTG > 1:289359/1‑91 AATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTG < 1:3333543/91‑1 AATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTG > 2:3543420/1‑91 ATCCTTTTCTGAATTAGTATTCATGTTTTTCTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTTTTATTAAAGTAACAACTGCCACTGC > 2:3788222/1‑91 ATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGC < 1:2219527/91‑1 ATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGC < 1:2745333/91‑1 ATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGC > 1:1245845/1‑91 ATCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGC < 1:1004318/91‑1 TCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCT > 2:1500187/1‑91 TCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCT > 2:1383396/1‑91 TCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCT < 2:717622/91‑1 TCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCT < 2:1078087/91‑1 TCCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCT < 2:1020898/91‑1 CCTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTT > 1:3801691/1‑91 CTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTT < 1:742940/91‑1 CTTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTT < 2:1189639/91‑1 TTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTT > 2:267297/1‑91 TTTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCGAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTT < 2:3661619/91‑1 TTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTT > 1:3212418/1‑91 TTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTT < 2:816760/91‑1 TTTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTT < 2:523098/91‑1 TTCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTTT < 1:2668869/91‑1 TCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTTTG > 1:1862917/1‑91 TCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTTTG > 2:2449390/1‑91 TCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTTTG > 2:1182287/1‑91 TCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTTTG < 2:210943/91‑1 TCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTTTG < 2:2114481/91‑1 TCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTTTG > 2:2448791/1‑91 TCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGCTATTAAAGTAACAACTGCCACTGCTTTTTTG < 1:3507770/91‑1 AACGGTGCTAGATTATTTACAAGCATTCGCAAAGTAAAACATGAATACTAATTCAGAAAAGGATTGGTCGAACATAGAACATGAAGTTCATTCGACCAATCCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/492813‑492708‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgaccaatccttttCTGAATTAGTATTCATGTTTTACTTTGCGAATGCTTGTAAATAATCTAGCACCGTTTGTTATTAAAGTAACAACTGCCACTGCTTTTTTG > USA300TCH1516_ALE/492758‑492847 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |