BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	= 885389	157 (0.770)	20 (0.120)	10/134	NT	13.0%	intergenic (+18/+55)	pspB/argO	Putative phosphoserine phosphatase 2/Arginine exporter protein ArgO
*	?	USA300TCH1516_ALE	= 885408	137 (0.800)	20 (0.120)	10/134	NT	13.0%	intergenic (+37/+36)	pspB/argO	Putative phosphoserine phosphatase 2/Arginine exporter protein ArgO

Only 100 of 111 total aligned reads displayed.

TAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  USA300TCH1516_ALE/885287‑885389

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagcgttatacaAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATATT  <  USA300TCH1516_ALE/885408‑885319

TAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATA                                                                                                        <  2:2377293/91‑1

TAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATA                                                                                                        <  2:728592/91‑1

 AATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAA                                                                                                       <  1:1185204/91‑1

 AATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAA                                                                                                       >  2:2105189/1‑91

 AATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAA                                                                                                       <  2:2447013/91‑1

 AATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAA                                                                                                       >  1:3448595/1‑91

 AATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAA                                                                                                       >  1:3448634/1‑91

 AATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAA                                                                                                       >  1:3448742/1‑91

 AATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAA                                                                                                       >  1:3449642/1‑91

 AATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAA                                                                                                       <  2:809077/91‑1

  ATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAA                                                                                                      <  1:1927342/91‑1

  ATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAA                                                                                                      <  1:3392105/91‑1

  ATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAA                                                                                                      <  2:1408775/91‑1

  ATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAA                                                                                                      >  2:2367213/1‑91

    ATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGC                                                                                                    >  1:3129339/1‑91

     TCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCG                                                                                                   >  2:2696065/1‑91

     TCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCG                                                                                                   <  1:2071611/91‑1

     TCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCG                                                                                                   <  1:2185051/91‑1

     TCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCG                                                                                                   <  1:784718/91‑1

     TCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCG                                                                                                   <  1:784701/91‑1

     TCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCG                                                                                                   <  1:2978142/91‑1

      CGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGT                                                                                                  >  1:2926498/1‑91

      CGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGT                                                                                                  >  1:550826/1‑91

      CGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGT                                                                                                  >  2:941340/1‑91

      CGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGT                                                                                                  <  1:2051628/91‑1

      CGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGT                                                                                                  >  2:434605/1‑91

      CGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGT                                                                                                  <  1:1351930/91‑1

       GGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTT                                                                                                 >  1:2578320/1‑91

       GGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTT                                                                                                 >  1:2577797/1‑91

       GGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTT                                                                                                 >  2:2643745/1‑91

       GGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTT                                                                                                 <  2:1275858/91‑1

       GGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTT                                                                                                 >  1:1089857/1‑91

       GGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTT                                                                                                 <  1:1996266/91‑1

       GGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTT                                                                                                 <  1:1866325/91‑1

        GTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTA                                                                                                <  2:3832894/91‑1

         TAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTAT                                                                                               <  2:2349963/91‑1

         TAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTAT                                                                                               >  2:617356/1‑91

          AATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATA                                                                                              <  2:2036082/91‑1

          AATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATA                                                                                              >  1:3769067/1‑91

          AATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATA                                                                                              >  1:3768393/1‑91

           ATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATAC                                                                                             >  2:1938131/1‑91

           ATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATAC                                                                                             <  1:922427/91‑1

            TTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA                                                                                            <  2:2521675/91‑1

            TTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA                                                                                            <  2:2727265/91‑1

            TTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA                                                                                            >  1:277116/1‑91

            TTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA                                                                                            <  1:966119/91‑1

            TTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA                                                                                            <  2:445499/91‑1

            TTGTAATATCCTGAAATATGAATATGACAATGGAACATTGAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA                                                                                            <  2:3350055/91‑1

                       TGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACT                                                                                 <  1:2466515/91‑1

                                AATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTAT                                                                        <  2:1895789/91‑1

                                AATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTAT                                                                        <  2:1656889/91‑1

                                 agATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATG                                                                       <  2:1335681/89‑1

                                 ATATTACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATG                                                                       <  2:3949999/91‑1

                                 ATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATG                                                                       <  2:458391/91‑1

                                 ATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATG                                                                       <  1:3791860/91‑1

                                 ATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATG                                                                       <  2:880218/91‑1

                                  TATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATGT                                                                      <  1:1813496/91‑1

                                  TATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATGT                                                                      <  2:3443875/91‑1

                                  TATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATGT                                                                      <  2:1981035/91‑1

                                    TGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATGTAT                                                                    <  1:1706501/91‑1

                                    TGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATGTAT                                                                    <  1:1706369/91‑1

                                      ACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATGTATAA                                                                  <  1:2651153/91‑1

                                        AATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATGTATAACG                                                                <  2:2984245/91‑1

                                           GGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTT                                                             <  2:1483312/91‑1

                                            tAACATTTAAATTTGTTGAGTTAATCGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACCTACTTCTGCCTATGTATAACGCTTT                                                            <  1:603133/90‑1

                                                                                         acgcGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTT               >  2:46439/5‑91

                                                                                          AAAGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTC              <  1:1209262/91‑1

                                                                                           AAGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCC             >  2:1195282/1‑91

                                                                                           AAGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCC             >  2:1195601/1‑91

                                                                                            AGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCA            >  1:222436/1‑91

                                                                                            AGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCA            >  2:949466/1‑91

                                                                                            AGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCA            <  2:2572419/91‑1

                                                                                            AGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCA            >  1:3827712/1‑91

                                                                                            AGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCA            >  1:3827621/1‑91

                                                                                            AGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCA            <  1:3578580/91‑1

                                                                                              CGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATT          <  1:2348750/91‑1

                                                                                              CGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATT          >  2:2080749/1‑91

                                                                                              CGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATT          <  1:202698/91‑1

                                                                                              CGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATT          >  1:3388334/1‑91

                                                                                              CGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATT          >  2:3106245/1‑91

                                                                                               GTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTG         >  2:716655/1‑91

                                                                                                TTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGT        >  1:3904819/1‑91

                                                                                                TTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGT        >  2:1304119/1‑91

                                                                                                 TATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTC       >  1:2503341/1‑91

                                                                                                 TATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTC       >  2:3066174/1‑91

                                                                                                  ATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCA      <  2:2021470/91‑1

                                                                                                  ATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCA      <  1:2335145/91‑1

                                                                                                  ATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCA      <  2:2021189/91‑1

                                                                                                   TACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCAT     <  2:1375406/91‑1

                                                                                                    ACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATA    <  2:3841458/91‑1

                                                                                                    ACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATA    <  1:2760595/91‑1

                                                                                                    ACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATA    <  2:2593648/91‑1

                                                                                                    ACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATA    <  2:182720/91‑1

                                                                                                     CAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTTACTCAACAAATTTAAATGTTCCATTGTCATAT   <  2:3892491/91‑1

                                                                                                     CAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATAT   <  1:89704/91‑1

                                                                                                     CAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATAT   <  1:394182/91‑1

                                                                                                      AAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATATT  <  1:3269954/91‑1

                                                                                                      AAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATATT  <  1:1646001/91‑1

                                                                                                      AAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATATT  <  1:1371491/91‑1

                                                                                                      AAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATATT  <  1:3177862/91‑1

TAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  USA300TCH1516_ALE/885287‑885389

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagcgttatacaAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAATTTGGATCAATTAACTCAACAAATTTAAATGTTCCATTGTCATATT  <  USA300TCH1516_ALE/885408‑885319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.