| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2455747 = | 108 (0.530) | 13 (0.080) | 5/132 | NT | 10.7% | intergenic (+5/+61) | lyrA/rpiA | Lysostaphin resistance protein A/Ribose‑5‑phosphate isomerase A |
| ? | USA300TCH1516_ALE | 2455795 = | 127 (0.760) | intergenic (+53/+13) | lyrA/rpiA | Lysostaphin resistance protein A/Ribose‑5‑phosphate isomerase A | |||||
Only 100 of 279 total aligned reads displayed.
AAGAAGACAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACACCCTCTT > USA300TCH1516_ALE/2455657‑2455836 | agacaggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaa < 2:2449200‑M1/1‑1 (MQ=255)agacaggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaa < 1:1843078‑M1/1‑1 (MQ=255)aagaagACAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACA < 1:328684‑M1/91‑1 (MQ=255)aagaagACAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACA < 1:2011729‑M1/91‑1 (MQ=255) gacaggatgcttcttagaaatggcagatgaagttagtgtaggcactcaagagggtgttaaaattttagaaagataatatatagtatagaaa > 2:2364651‑M1/90‑91 (MQ=255) gacaggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaaa < 1:1134144‑M1/2‑1 (MQ=255) gacaggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaaa > 2:340211‑M1/90‑91 (MQ=255) gacaggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaaa > 1:657308‑M1/90‑91 (MQ=255) agaagaCAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAA > 1:1956154‑M1/1‑91 (MQ=255) agaagaCAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAA < 1:1418767‑M1/91‑1 (MQ=255) agaagaCAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAA < 1:3912823‑M1/91‑1 (MQ=255) agaagaCAGACGATCATCAGTTGTAATTGATGCAGAGAAACAGATCGAAAAAACTGAAGATCAATCTTCAGATAAAAACAAATAATAACAA < 2:3566254‑M1/91‑1 (MQ=255) aagaCAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAG < 1:1776323‑M1/91‑1 (MQ=255) aagaCAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAG > 1:479814‑M1/1‑91 (MQ=255) aagaCAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAG < 1:3514606‑M1/91‑1 (MQ=255) ggatacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAgcg < 1:1723469‑M1/6‑1 (MQ=255) gacagacGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCG > 1:2878876‑M1/1‑91 (MQ=255) acagacGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGC < 1:1604172‑M1/91‑1 (MQ=255) cagacGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCT > 2:3174664‑M1/1‑91 (MQ=255) cagacGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCT > 2:1535712‑M1/1‑91 (MQ=255) tacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCtt < 2:3071184‑M1/9‑1 (MQ=255) tacttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCtt < 2:766349‑M1/9‑1 (MQ=255) gacGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTG > 1:1195092‑M1/1‑91 (MQ=255) acGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACACTCTTCAGATAAAAACAAATAATAACAAATCGCTCGC > 1:1965035‑M1/1‑91 (MQ=255) ttcttagatatggcagatcaagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCTTGCt > 1:3065463‑M1/80‑91 (MQ=255) cGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCT < 2:1098615‑M1/91‑1 (MQ=255) cGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCT < 2:1466851‑M1/91‑1 (MQ=255) cGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCT < 2:2355327‑M1/91‑1 (MQ=255) gTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTA < 2:624132‑M1/91‑1 (MQ=255) gTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTA > 2:3263118‑M1/1‑91 (MQ=255) ttCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAG < 1:828913‑M1/91‑1 (MQ=255) tcaGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTAcc > 2:1367834/1‑91 (MQ=255) tcaGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTAcc > 2:468364/1‑91 (MQ=255) aGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACctc < 2:2707638/91‑1 (MQ=255) gTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACctct < 1:2183451/91‑1 (MQ=255) gTAATAGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAATCTCTTGCTAGTACCTCTaaa < 2:1789413/91‑1 (MQ=255) aTTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTaaaaa > 2:1419200/1‑91 (MQ=255) aTTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTaaaaa > 2:1429562/1‑91 (MQ=255) ttGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAg > 2:3733534/1‑91 (MQ=255) tGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAga < 1:385697/91‑1 (MQ=255) gATGCAGAAAAACATATCGAAAAAACTGAAGAACAATTTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACATATTAAAAAgat < 2:510018/91‑1 (MQ=255) gATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGcatcatctttttaaga < 2:1011669‑M1/91‑17 (MQ=255) gATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAgat > 2:1085046/1‑91 (MQ=255) tGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGcatcatctttttaagagg < 1:1409387‑M1/91‑19 (MQ=255) gttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCTTGCTAGTACCTCTTAAAAAgatgat > 1:1354387‑M1/59‑91 (MQ=255) ttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCTTGCTAGTACCTCTTAAAAAGatgatg > 2:2665316‑M1/58‑91 (MQ=255) cAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGcatcatctttttaagaggta < 2:2153716‑M1/91‑21 (MQ=255) cAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGatgatg > 2:1194115/1‑91 (MQ=255) tattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtatagaAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGc > 1:277117‑M1/57‑91 (MQ=255) gAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAGCAAAGCGCTTGCTAGcatcatctttttaagaggtact < 1:3333373‑M1/91‑23 (MQ=255) gAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGct < 2:1622385‑M2/91‑3 (MQ=255) gAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAAAAAAGCGCTTGCTAGcatcatctttttaagaggtact < 1:2907277‑M1/91‑23 (MQ=255) aaaaCATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGctag < 1:3745002‑M2/91‑5 (MQ=255) aaCATATCGAAAAAACTGAAGAAGCATCTTCAGATAAAAACAAGTAATAATAAAGCGCTTGCTAGTACCTCTTAAAAAGATGAGGctagca > 2:3675481‑M2/1‑85 (MQ=255) aaCATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGctagca > 2:158736‑M2/1‑85 (MQ=255) cATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGctagcaag < 2:3425824‑M2/91‑9 (MQ=255) atatCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGctagcaagc > 1:7423‑M2/1‑82 (MQ=255) atatCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGATAGTACCTCTTAAAGAGATGATGctagcaagc < 1:3380519‑M2/91‑10 (MQ=255) atCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGctagcaagcgc > 2:2818785‑M2/1‑80 (MQ=255) atCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGctagcaagcgc > 2:2113551‑M2/1‑80 (MQ=255) atCGAAAAAACTGAAGAACAATCTACAGATACAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGctagcaagcgc < 2:3901485‑M2/91‑12 (MQ=255) tCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGctagcaagcgct > 1:2442898‑M2/1‑79 (MQ=255) cGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGctagcaagcgctt < 1:1311068‑M2/91‑14 (MQ=255) gAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTCGCTAGTACCTCTTAAAAAGATGATGctagcaagcgcttt < 2:3091340‑M2/91‑15 (MQ=255) aaaaatCTGAAGAACAATCTTCAGATAAAAACAAATAATCACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCtttt < 1:3677790/91‑1 (MQ=255) aaaaagCTGAAGAACAAGCTTCAGATAAAAACAAATAATGACAAAGCGCTGGCTAGTACCTCTTAAAGAGATGATGCTAGCAAGCGCtttt < 2:679027/91‑1 (MQ=255) aaaaaCTGAAGCACAATCTTCAGATAACAACAAATAATAACAAAGCGCGTGCTAGTACCTCTGAAAAAGATGATGCTAGCCTGCGCTTTTc < 2:1928332/91‑1 (MQ=255) aaaCTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTcta > 2:3319581/1‑91 (MQ=255) aCTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTctata > 1:910497/1‑91 (MQ=255) gaagaaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCCAGCGCTTTTctatacta > 2:2175067/1‑91 (MQ=255) gaagaaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAATACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTctatacta > 1:3823049/1‑91 (MQ=255) aaCAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACtatata > 2:426098/1‑91 (MQ=255) tgttCTTCAGATAAAAACCAATAATAACATTTCGCTTGCTATTTTCTCTTAAAAAGCTTATGTTATCACGCGCTTTTCTATACTATAtatt > 2:2345954/4‑91 (MQ=255) tCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATattatt < 1:186152/91‑1 (MQ=255) gtCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTAtttt < 2:2855970/90‑1 (MQ=255) tCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTAttttt > 1:2387269/1‑91 (MQ=255) tCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTAttttt > 1:521860/1‑91 (MQ=255) tCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTAttttt < 1:1001860/91‑1 (MQ=255) tCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGACGCTAGCAAGCGCTTTTCTATACTATATATTAttttt > 2:1645901/1‑91 (MQ=255) cAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTc > 2:3811260/1‑91 (MQ=255) gATAAAAACAAATAATAGCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTa < 2:909856/91‑1 (MQ=255) gATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTa < 1:992205/91‑1 (MQ=255) gATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTACTa > 1:3190689/1‑91 (MQ=255) aaaaaCAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTAAATATTATTTTTCTaaaa < 2:205661/91‑1 (MQ=255) cAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTa < 2:2552810/91‑1 (MQ=255) cAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTa > 1:2745242/1‑91 (MQ=255) aaaTAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTaa > 2:1884187/1‑91 (MQ=255) aaaTAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTaa > 2:1300265/1‑91 (MQ=255) aaaTAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTACACTATATATTATTTTTCTAAAATTTTaa > 2:2297010/1‑91 (MQ=255) ataataACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAaca > 1:1503695/1‑91 (MQ=255) ataataACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAaca > 2:2230091/1‑91 (MQ=255) ataataACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAaca > 2:3228207/1‑91 (MQ=255) ataaCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACAccc > 2:1217488/1‑91 (MQ=255) ataaCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACAccc > 2:2064341/1‑91 (MQ=255) taaCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACACCct < 1:703450/91‑1 (MQ=255) taaCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTACCAAGCGCTTTTCTATACTATATATTGATTTTCTAAAATTTTAACACAct > 2:3003709/1‑91 (MQ=255) aaCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACACCctc < 1:3772279/91‑1 (MQ=255) aCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACACCctct > 1:232508/1‑91 (MQ=255) aCAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACACCctct < 1:1521925/91‑1 (MQ=255) cAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACACCCTCtt > 1:3005746/1‑91 (MQ=255) | AAGAAGACAGACGTTCATCAGTTGTAATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAATAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAATTTTAACACCCTCTT > USA300TCH1516_ALE/2455657‑2455836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |