| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2679966 | 193 (0.950) | 15 (0.090) | 6/130 | NT | 7.9% | intergenic (+18/+742) | ssaA2_4/USA300HOU_RS13810 | Staphylococcal secretory antigen ssaA2/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2679991 | 194 (1.180) | intergenic (+43/+717) | ssaA2_4/USA300HOU_RS13810 | Staphylococcal secretory antigen ssaA2/hypothetical protein | |||||
Only 100 of 313 total aligned reads displayed.
TTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATT > USA300TCH1516_ALE/2679876‑2680056 | ttATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCAC < 2:3159258‑M1/91‑1 (MQ=255)ttATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCAC < 1:1427776‑M1/91‑1 (MQ=255) tATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGAAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACg < 2:191781/91‑1 (MQ=255) cGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAAc > 1:128137/1‑91 (MQ=255) cccATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTGTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGc < 2:3247712/91‑1 (MQ=255) ccATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCt > 1:401737/1‑91 (MQ=255) cATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCtt < 2:2148485/91‑1 (MQ=255) aTTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTc < 2:3409273/91‑1 (MQ=255) ttAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCa < 2:4448/91‑1 (MQ=255) aatacaatacACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAAttt < 2:2637645/91‑1 (MQ=255) tacaatacaCGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTcc > 1:1633641/1‑91 (MQ=255) tacaatacaCGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTcc < 2:867268/91‑1 (MQ=255) tacaatacaCGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTcc < 1:2986100/91‑1 (MQ=255) caatacaCGTGTTCTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTg > 1:3053719/1‑91 (MQ=255) caatacaCGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTg > 1:1703192/1‑91 (MQ=255) caatacaCGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTg > 1:3095204/1‑91 (MQ=255) aatacaCGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGt > 2:952567/1‑91 (MQ=255) acacGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATg > 1:2109730/1‑91 (MQ=255) cacGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGc > 1:1863229/1‑91 (MQ=255) acGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgtt < 1:214783‑M1/91‑25 (MQ=255) acGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCg > 1:2462849/1‑91 (MQ=255) acGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCg < 2:3959452/91‑1 (MQ=255) cGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCgt < 1:2603353/91‑1 (MQ=255) gtgtACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTG > 1:388516‑M1/1‑91 (MQ=255) tgtACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttcgt < 1:2532975‑M1/91‑28 (MQ=255) tgtACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGT > 1:1032426‑M1/1‑91 (MQ=255) tgtACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGT > 1:2746174‑M1/1‑91 (MQ=255) gtACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCACTTTCCTGTATGCGTGTG > 2:1927106‑M1/1‑91 (MQ=255) aCTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttcgtgat < 2:2117281‑M1/91‑31 (MQ=255) tAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAG < 1:373558‑M1/91‑1 (MQ=255) tAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAG < 1:3294410‑M1/91‑1 (MQ=255) aaGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGA > 2:3450976‑M1/1‑91 (MQ=255) aaGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGA > 1:931277‑M1/1‑91 (MQ=255) aaGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGA > 1:3359001‑M1/1‑91 (MQ=255) gCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAG > 1:3498232‑M1/1‑91 (MQ=255) gCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAG > 2:2077735‑M1/1‑91 (MQ=255) gCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAG > 1:907184‑M1/1‑91 (MQ=255) cAAAAAGGCAGCACGTGACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGT < 2:3784118‑M1/91‑1 (MQ=255) aaaaaGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagtt < 2:1273747‑M1/91‑38 (MQ=255) aaaaGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTT < 1:2271534‑M1/91‑1 (MQ=255) aaaGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTT < 2:2170652‑M1/91‑1 (MQ=255) aaGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTT > 1:3450942‑M1/1‑91 (MQ=255) aaGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTT > 2:885771‑M1/1‑91 (MQ=255) aGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTtttta > 2:2989610/1‑91 (MQ=255) aGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTtttta > 1:1089114/1‑91 (MQ=255) ggCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGCACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTtcttat > 2:1713883/1‑91 (MQ=255) gcagcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTttttatt > 1:195787/1‑91 (MQ=255) gcagcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTttttatt > 2:3108406/1‑91 (MQ=255) cagcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTttttattt > 2:123418/1‑91 (MQ=255) gcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTttttatttta > 2:1624223/1‑91 (MQ=255) gcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATCTCCTGTATGCGTGTGATAGAAGAttttatttta > 2:533951/1‑91 (MQ=255) caCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATCGAAGTTtttattttat > 2:3035915/1‑91 (MQ=255) caCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTtttattttat > 1:2414410/1‑91 (MQ=255) aCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATg > 2:3487554/1‑91 (MQ=255) aCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATg > 2:1467710/1‑91 (MQ=255) aaCTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAat < 2:2686871/91‑1 (MQ=255) aCTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAatt < 1:3658131/91‑1 (MQ=255) ttAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAattata > 1:3196943/1‑91 (MQ=255) tAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCTTGTGATAGAAGTTTTTATTTTATGAAattatat < 2:400864/91‑1 (MQ=255) tAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAattatat < 2:3357556/91‑1 (MQ=255) aaCTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAattatatt < 2:3530480/91‑1 (MQ=255) aCTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAattatatta < 1:1018162/91‑1 (MQ=255) aCTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAattatatta < 1:1526832/91‑1 (MQ=255) cTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAattatattat > 1:867688/1‑91 (MQ=255) tataTTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTCTGCGTGTGATAGAAGTTTTCATTTTATGAAATTATattatt > 2:1128584/1‑91 (MQ=255) tataTTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATattatt > 2:2487797/1‑91 (MQ=255) atatTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATAttatta < 2:792314/91‑1 (MQ=255) atatTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATAttatta > 2:1207257/1‑91 (MQ=255) tatTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTAc > 1:2058853/1‑91 (MQ=255) tttACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACtt < 2:2422584/91‑1 (MQ=255) ttACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTc > 2:2794124/1‑91 (MQ=255) aaTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACaa > 1:496289/1‑91 (MQ=255) aaTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACaa > 1:1207811/1‑91 (MQ=255) aaTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACaa > 1:795731/1‑91 (MQ=255) aTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACaaa > 1:3719461/1‑91 (MQ=255) aaaaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAAttt > 1:54216/1‑91 (MQ=255) aaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgccttttt < 2:1274110‑M2/91‑55 (MQ=255) aaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttct > 1:2895885‑M1/1‑52 (MQ=255) cTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAAtt > 2:3606697/1‑91 (MQ=255) cTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAAtt < 2:2021880/91‑1 (MQ=255) cTTATATCACGAACTCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAAtt < 1:3565454/91‑1 (MQ=255) tCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGc > 2:2625512/1‑91 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttcttcatg > 1:1251460‑M1/1‑47 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGcc < 2:2885644/91‑1 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGcc > 2:258418/1‑91 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGcc > 2:1740494/1‑91 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGcc < 1:1139764/91‑1 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGcc > 1:3808684/1‑91 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATCTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGcc < 1:3416619/91‑1 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGAGTGATAGCAGTTGCTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGcc > 1:2698710/1‑91 (MQ=25) tATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttag < 2:1960112‑M2/91‑61 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttcttcatga > 1:2446168‑M1/1‑46 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttcttcaaga > 1:2946926‑M1/1‑46 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCg > 1:2265407/1‑91 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCg < 2:132690/91‑1 (MQ=255) tCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTa < 1:3935798/91‑1 (MQ=255) aCGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAAt < 2:64286/91‑1 (MQ=255) aCGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAAt > 2:1517003/1‑91 (MQ=255) cGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttcttcatgagacga > 1:1596770‑M1/1‑41 (MQ=255) cGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttcttcatgagacga > 2:962383‑M1/1‑41 (MQ=255) | TTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATT > USA300TCH1516_ALE/2679876‑2680056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |