| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2679966 | 193 (0.950) | 15 (0.090) | 6/130 | NT | 7.9% | intergenic (+18/+742) | ssaA2_4/USA300HOU_RS13810 | Staphylococcal secretory antigen ssaA2/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2679991 | 194 (1.180) | intergenic (+43/+717) | ssaA2_4/USA300HOU_RS13810 | Staphylococcal secretory antigen ssaA2/hypothetical protein | |||||
Only 100 of 333 total aligned reads displayed.
CGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTAT > USA300TCH1516_ALE/2679901‑2680081 | cGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCgt < 2:1185561/91‑1 (MQ=255)cGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCAATCACGAACGCTTCAATTTCCTGTATGCgt < 2:2154687/91‑1 (MQ=255) gtgtACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTG > 2:3563164‑M1/1‑91 (MQ=255) tgtACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGT > 1:1032426‑M1/1‑91 (MQ=255) gtACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTG > 2:1926342‑M1/1‑91 (MQ=255) cTAAGCAAAGAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATA < 2:2604100‑M1/91‑1 (MQ=255) tAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAG > 1:3261705‑M1/1‑91 (MQ=255) aaGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGA > 1:931010‑M1/1‑91 (MQ=255) aaGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGA > 2:3450976‑M1/1‑91 (MQ=255) aaGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGA > 1:3359001‑M1/1‑91 (MQ=255) aaaaGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTT < 1:2271534‑M1/91‑1 (MQ=255) aaGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTT > 2:885771‑M1/1‑91 (MQ=255) aaGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTT > 2:2067154‑M1/1‑91 (MQ=255) aaGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTT < 1:3671984‑M1/91‑1 (MQ=255) aGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTtttta > 2:2989639/1‑91 (MQ=255) ggCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGCACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTtcttat > 2:1713883/1‑91 (MQ=255) ggCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTttttat < 1:3930751/91‑1 (MQ=255) gcagcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTttttatt > 1:195787/1‑91 (MQ=255) gcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTttttatttta > 1:2486836/1‑91 (MQ=255) gcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTttttatttta > 1:2716959/1‑91 (MQ=255) gcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTttttatttta > 2:1624223/1‑91 (MQ=255) caCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATCGAAGTTtttattttat > 2:3035915/1‑91 (MQ=255) caCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTtttattttat > 1:3831870/1‑91 (MQ=255) tAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTtttattttatcaca < 1:3117197/91‑5 (MQ=255) aaCTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGCTAGAAGTTTTTATTTTATGaact > 2:1259615/1‑89 (MQ=255) aaCTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAat < 2:2686871/91‑1 (MQ=255) aCTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAatt < 1:1772071/91‑1 (MQ=255) cTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAatta > 1:428954/1‑91 (MQ=255) tttAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAattat < 1:348670/91‑1 (MQ=255) ttAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAattata > 1:3196943/1‑91 (MQ=255) tAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAattatat < 1:1224984/91‑1 (MQ=255) aCTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAattatatta < 1:1018162/91‑1 (MQ=255) atatTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATAttatta > 2:1207366/1‑91 (MQ=255) atatTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATAttatta < 2:792314/91‑1 (MQ=255) tatTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTAc > 1:2058853/1‑91 (MQ=255) atctACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACt > 1:2950040/4‑91 (MQ=255) atTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACt > 1:3561262/1‑91 (MQ=255) tttACTAATCATAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACtt < 1:3588800/91‑1 (MQ=255) tttACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACtt < 2:2422584/91‑1 (MQ=255) ttACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTc > 2:2794124/1‑91 (MQ=255) ttACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTc > 2:3404765/1‑91 (MQ=255) aCTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTa > 1:1263367/1‑91 (MQ=255) aaTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACaa > 1:496289/1‑91 (MQ=255) aaTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACaa < 1:692131/91‑1 (MQ=255) aaTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACaa > 1:795731/1‑91 (MQ=255) aaTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACaa > 1:1342179/1‑91 (MQ=255) aTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACaaa > 2:2388842/1‑91 (MQ=255) aTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACaaa > 1:3719639/1‑91 (MQ=255) tCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAAt > 1:2545104/1‑91 (MQ=255) cAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAAtt > 2:3963242/1‑91 (MQ=255) aaaaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAAttt < 1:1559296/91‑1 (MQ=255) aaaaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAAttt < 2:2633627/91‑1 (MQ=255) aaaaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAAttt < 2:2518816/91‑1 (MQ=255) aaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgccttttt < 2:1274110‑M2/91‑55 (MQ=255) cTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAAtt < 2:1314832/91‑1 (MQ=255) cTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAAtt > 2:3606697/1‑91 (MQ=255) cTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAAtt > 2:598099/1‑91 (MQ=255) tCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGc > 2:3335469/1‑91 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttcttcatg > 1:2821977‑M1/1‑47 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGcc < 2:2885644/91‑1 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGcc > 2:3075212/1‑91 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATCTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGcc < 1:3416619/91‑1 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttag < 2:1960112‑M2/91‑61 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttcttcatga > 1:2446168‑M1/1‑46 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttcttcatga > 1:1628034‑M1/1‑46 (MQ=255) aTCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttagt < 2:2117191‑M2/91‑62 (MQ=255) tCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTa < 1:3019859/91‑1 (MQ=255) cACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTaa > 2:145078/1‑91 (MQ=255) cACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATAATATTATTACTTCTACAAATTTCAAATTGCCGTaa > 1:1082185/1‑91 (MQ=255) cGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttcttcatgagacga > 2:32136‑M1/1‑41 (MQ=255) cGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttcttcatgagacga > 1:1900856‑M1/1‑41 (MQ=255) cGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTtgattagtaaatcagtctaatgaaaagtaaataacttcttcatgagacga > 2:962383‑M1/1‑41 (MQ=255) cGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAAtt > 1:1118158/1‑91 (MQ=255) gAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTg > 1:906495/1‑91 (MQ=255) gAACGCTTCAATTTCCGGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTg < 2:1536468/91‑1 (MQ=255) aaCGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttagtacacgt < 1:213090‑M2/91‑68 (MQ=255) aCGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTttttttttaaatcagtctaatgaaaagtaaataacttcttcatgagacgaatt > 2:1791563‑M1/1‑38 (MQ=255) cGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAAc > 2:492588/1‑91 (MQ=255) cGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAAc < 2:3498232/91‑1 (MQ=255) gCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACg < 1:94811/91‑1 (MQ=255) cTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGt < 1:2674908/91‑1 (MQ=255) cTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGt > 2:455756/1‑91 (MQ=255) ttCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGta < 2:953622/91‑1 (MQ=255) tCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGtat > 1:2369099/1‑91 (MQ=255) aaTTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTatat > 1:2242204/1‑91 (MQ=255) aaTTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTatat < 1:374814/91‑1 (MQ=255) ttCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATttc < 1:2934517/91‑1 (MQ=255) tCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATttct > 2:3835287/1‑91 (MQ=255) ccTGTATGCGTGTGCTAGAAGTTTTTATTTTATGAAATTATATTATTATTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATttctt > 2:3356972/1‑91 (MQ=255) cTGTATGCGTGTGATAGAAGTTTTTttttttttttttcagtctaatgaaaagtaaataacttcttcatgagtcgaattcattataggattc > 2:415509‑M1/1‑25 (MQ=255) cTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATttcttc > 2:1329664/1‑91 (MQ=255) cTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATttcttc < 2:695970/91‑1 (MQ=255) gTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATttcttctt > 2:2184396/1‑91 (MQ=255) aTGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCa > 1:580112/1‑91 (MQ=255) tGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCaa > 1:2199945/1‑91 (MQ=255) tGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCaa < 1:2305871/91‑1 (MQ=255) tcGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAAc < 2:855464/90‑1 (MQ=255) gCGTGTGATAGAAGTTTTTATTATATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAAc < 2:1120138/91‑1 (MQ=255) gtgtGATAGAAGTTTTTATTTTATGAAGTTATATTATGACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACta < 2:149586/91‑1 (MQ=255) tgtgATAGAAGTTTTTATTTTATCGAATTATATTATTACTTCTGCAAATTGCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACtat < 2:3670639/91‑1 (MQ=255) | CGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTAT > USA300TCH1516_ALE/2679901‑2680081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |