| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2716752 | 129 (0.630) | 10 (0.060) | 6/138 | NT | 7.6% | intergenic (+60/+90) | USA300HOU_RS13965/USA300HOU_RS13970 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2716804 | 132 (0.750) | intergenic (+112/+38) | USA300HOU_RS13965/USA300HOU_RS13970 | hypothetical protein/hypothetical protein | |||||
Only 100 of 257 total aligned reads displayed.
TCGCCAACAATACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTT > USA300TCH1516_ALE/2716662‑2716842 | ggagcaatgttcaaagatcttgatggacaccattttaattttttggtctgctaaaatgaaattctcaaaagaataaataaAAAGCCCATAc > 1:2608207‑M1/81‑91 (MQ=255) ccAACAATACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGa > 2:2875336/1‑91 (MQ=255) caacaaTACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGAt > 2:1485609/1‑91 (MQ=255) caacaaTACGGTTATATTCAAAATTAATACTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCAATACTGAt > 2:3432246/1‑91 (MQ=255) aacaaTACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGAtt < 1:2740740/91‑1 (MQ=255) caaTACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGa > 2:929425/1‑91 (MQ=255) aaTACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGaa > 1:1463122/1‑91 (MQ=255) aaTACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGaa > 2:3947513/1‑91 (MQ=255) tACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGa < 2:1311993/91‑1 (MQ=255) cGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGaca > 1:2246008/1‑91 (MQ=255) ttATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTa < 1:3474823/91‑1 (MQ=255) ttATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTa > 1:2107103/1‑91 (MQ=255) atTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACagagatgaagcgtaatgtg > 1:3889242‑M1/1‑72 (MQ=255) aaaTTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGc < 1:788367/91‑1 (MQ=255) aaaTTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGc > 2:1704883/1‑91 (MQ=255) aaTATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCAt > 1:2367875/1‑91 (MQ=255) aaTATTGGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCAt < 2:2865299/91‑1 (MQ=255) atatTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATg < 2:3527388/91‑1 (MQ=255) tatTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATgg < 2:1424444/91‑1 (MQ=255) tatTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATgg > 1:608513/1‑91 (MQ=255) ttGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGc > 2:193560/1‑91 (MQ=255) ttGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGc < 1:3122349/91‑1 (MQ=255) tGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGca < 1:1769207/91‑1 (MQ=255) cACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACAtt < 2:3192498/91‑1 (MQ=255) accaGGTATTCCCCGTAAGGTGCCCACTTACCTCATAAACAAAGCAAACACTTAATTACGACACAAATGCAACACAACATGATGCACAttc > 2:684798/4‑90 (MQ=255) cGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTAc > 1:485549/1‑91 (MQ=255) gAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACg > 2:2399889/1‑91 (MQ=255) gAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACg > 2:2327400/1‑91 (MQ=255) aGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGGTTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGc < 2:3251828/91‑1 (MQ=255) aGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGc < 1:209040/91‑1 (MQ=255) aGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGc < 2:2454872/91‑1 (MQ=255) ggTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCt > 1:3547365/1‑91 (MQ=255) ggTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCt > 1:2703601/1‑91 (MQ=255) aTTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCa > 2:1157487/1‑91 (MQ=255) ttGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCAt < 1:710015/91‑1 (MQ=255) ttGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCAt > 1:203488/1‑91 (MQ=255) tGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCAtc > 1:2845642/1‑91 (MQ=255) tGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCAtc < 2:3956511/91‑1 (MQ=255) gCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCAtct > 2:3689443/1‑91 (MQ=255) ctaaaatgaaattctcaaaagaataaataaAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCAtct > 2:2920989‑M1/31‑91 (MQ=255) taaaatgaaattctcaaaagaataaataaAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCAtctc > 2:3200867‑M1/30‑91 (MQ=255) ttAAGGTGCCAACTGACCTCATAAACAAAGCCCATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagt < 2:2820895‑M1/91‑55 (MQ=255) ttAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgt > 1:3302987‑M2/1‑89 (MQ=255) tAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACGAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgta < 2:3466610‑M2/91‑4 (MQ=255) aGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatg < 1:2991914‑M2/91‑6 (MQ=255) ggTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgg > 1:1939796‑M2/1‑85 (MQ=255) ggTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgg > 1:301064‑M2/1‑85 (MQ=255) gTGCCAACTGACCTCATAAACAAAGCCCATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatggg < 1:1107412‑M1/91‑60 (MQ=255) gTGCCAACTGACCTCATAAACAAAGCCCATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatggg < 1:1392100‑M1/91‑60 (MQ=255) aattctcaaaagaataaataaAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATggg > 1:56083‑M1/22‑91 (MQ=255) tGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggc < 1:611452‑M2/91‑9 (MQ=255) tGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggc > 1:1887618‑M2/1‑83 (MQ=255) tGCCAACTGACCTCATAA‑‑AAAGCCCATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctt < 1:1834620‑M1/91‑63 (MQ=255) gCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTGATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggct > 1:3146544‑M2/1‑82 (MQ=255) ccAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctt < 1:3628366‑M2/91‑11 (MQ=255) aaCTGACTTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCtttt < 2:3515289/91‑1 (MQ=255) gACCTCATAAACAAAGCCCATACTGTTTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttatt < 1:3668394/91‑1 (MQ=255) gACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttatt < 1:1593193/91‑1 (MQ=255) gACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttatt > 1:3059593/1‑91 (MQ=255) gACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttatt < 2:1854128/91‑1 (MQ=255) gACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATCCGCTTtttctt > 2:1659917/1‑91 (MQ=255) aagaataaataaAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttatt > 2:2946756‑M1/13‑91 (MQ=255) ccTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttattta < 2:3298809/91‑1 (MQ=255) ccTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttattta > 1:2915980/1‑91 (MQ=255) cTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTttatttat > 2:3629670/1‑91 (MQ=255) cTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTttatttat < 1:2471379/91‑1 (MQ=255) cATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctttgtttttgagg < 2:3649645‑M2/91‑22 (MQ=255) cATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTc > 1:2301404/1‑91 (MQ=255) aTAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCt < 2:875580/91‑1 (MQ=255) aTAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCCCTGTATGGGCTTTTTCTTTATTcc > 2:3435561/1‑90 (MQ=255) aCAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTg > 2:940845/1‑91 (MQ=255) cAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTga < 1:40317/91‑1 (MQ=255) aaaGCCCATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttg < 2:1802267‑M1/91‑81 (MQ=255) aaaGCCCATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttg < 1:1012840‑M1/91‑81 (MQ=255) AAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTgag > 1:619947‑M1/1‑91 (MQ=255) aaGCCCATACagagataaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttgg < 1:1568868‑M1/91‑82 (MQ=255) AAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTgaga < 2:3227189‑M1/91‑1 (MQ=255) aGCCCATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttggc < 1:1149852‑M1/91‑83 (MQ=255) aGCCCATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttggc > 1:2409485‑M1/1‑9 (MQ=255) AGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGaa < 1:740780‑M1/91‑1 (MQ=255) gCCCATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttggca > 1:2822291‑M1/1‑8 (MQ=255) cccATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttggcac < 1:2346163‑M1/91‑85 (MQ=255) CCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAtt > 2:2547034‑M1/1‑91 (MQ=255) CCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAtt > 1:3824699‑M1/1‑91 (MQ=255) CCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAtt > 1:421473‑M1/1‑91 (MQ=255) CCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAtt > 2:762691‑M1/1‑91 (MQ=255) CCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAtt > 1:1158063‑M1/1‑91 (MQ=255) ccATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttggcacc > 1:1939795‑M1/1‑6 (MQ=255) ccATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttggcacc > 1:301041‑M1/1‑6 (MQ=255) ccATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttggcacc > 2:2320569‑M1/1‑6 (MQ=255) ccATACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttggcacc > 2:2395689‑M1/1‑6 (MQ=255) CCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAttt < 1:1050123‑M1/91‑1 (MQ=255) CCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAttt > 1:1986963‑M1/1‑91 (MQ=255) CATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTc < 1:3841684‑M1/91‑1 (MQ=255) CATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCCTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGCATTTc < 2:240628‑M1/91‑1 (MQ=255) CATACTGATTGAAGACACTAATGTGTCGCACCAAAGTGCACATTACGCTTCAGCTCTATATGCGCGTTCCATTTATTCTTTTGAGAACTTc > 2:1084403‑M1/1‑91 (MQ=255) aTACagagatgaagcgtaatgtgcaccatggtgcgacacattagtgtcttcaatcagtatgggctttgtttatgaggtcagttggcacctt > 1:699101‑M1/1‑4 (MQ=255) ATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCa < 2:3520571‑M1/91‑1 (MQ=255) TACTGAGTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCAt > 2:2756112‑M1/1‑91 (MQ=255) aCTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctttgtttatgaggtcagttggcaccttaa < 2:3889242‑M2/91‑38 (MQ=255) | TCGCCAACAATACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTT > USA300TCH1516_ALE/2716662‑2716842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |