| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2716752 | 129 (0.630) | 10 (0.060) | 6/138 | NT | 7.6% | intergenic (+60/+90) | USA300HOU_RS13965/USA300HOU_RS13970 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2716804 | 132 (0.750) | intergenic (+112/+38) | USA300HOU_RS13965/USA300HOU_RS13970 | hypothetical protein/hypothetical protein | |||||
Only 100 of 235 total aligned reads displayed.
ACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTC > USA300TCH1516_ALE/2716714‑2716894 | aaGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtat > 1:699101‑M2/1‑87 (MQ=255) aGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatg < 2:93233‑M2/91‑6 (MQ=255) ggTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgg > 1:301064‑M2/1‑85 (MQ=255) ggTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgg > 2:2320569‑M2/1‑85 (MQ=255) ggTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgg > 2:2395689‑M2/1‑85 (MQ=255) ggTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgg > 1:1939796‑M2/1‑85 (MQ=255) aattctcaaaagaataaataaAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATggg > 1:56083‑M1/22‑91 (MQ=255) tGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggc > 1:2822291‑M2/1‑83 (MQ=255) gCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTGATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggct > 1:3146544‑M2/1‑82 (MQ=255) gCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggct < 1:1149852‑M2/91‑10 (MQ=255) ccAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTTATCTCTgtatgggctt < 1:1568868‑M2/91‑11 (MQ=255) ccAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctt < 1:3628366‑M2/91‑11 (MQ=255) cAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggcttt < 1:1012840‑M2/91‑12 (MQ=255) aaCTGACTTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCtttt < 2:3515289/91‑1 (MQ=255) aaCTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCAGTATGGGCtttt > 2:3283505/1‑91 (MQ=255) aCTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCttttt < 2:1352754/91‑1 (MQ=255) gACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttatt < 1:3669847/91‑1 (MQ=255) gACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttatt < 2:1854128/91‑1 (MQ=255) gACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttatt > 1:3059593/1‑91 (MQ=255) gACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttatt < 2:888491/91‑1 (MQ=255) gACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttatt < 1:2446549/91‑1 (MQ=255) gACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATCCGCTTtttctt > 2:1659917/1‑91 (MQ=255) gACCCCATAAACAAAGCCCATACTGATTGACGACACTAATGTGTCGCACCACGGTGCCCATCACGCTTCCCCTCCGTATGGCCTTtttctt > 2:25132/1‑91 (MQ=255) aagaataaataaAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttatt > 2:2946749‑M1/13‑91 (MQ=255) aCCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttattt > 2:1666916/1‑91 (MQ=255) ccTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTtttattta > 1:2915980/1‑91 (MQ=255) cTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTttatttat > 2:3629670/1‑91 (MQ=255) tCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTtatttatt < 1:2295659/91‑1 (MQ=255) cATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctttgtttttgagg < 2:3649645‑M2/91‑22 (MQ=255) cATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTc > 1:2301580/1‑91 (MQ=255) cATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATCTATTc > 2:3203934/1‑91 (MQ=255) aTAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCt < 2:3523108/91‑1 (MQ=255) tAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCtt > 1:516774/1‑91 (MQ=255) cAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTga > 2:3124770/1‑91 (MQ=255) cAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTga < 1:40317/91‑1 (MQ=255) aaGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctttttatgaggtcagttggca < 1:1834620‑M2/91‑30 (MQ=255) aaGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctttgtttatgaggtcagttgg < 1:2371174‑M2/91‑30 (MQ=255) aaGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtacgggctttgtttatgaggtcagttgg < 1:3433317‑M2/91‑30 (MQ=255) AAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTgaga > 1:17782‑M1/1‑91 (MQ=255) AGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGaa < 1:740780‑M1/91‑1 (MQ=255) cccATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctttgtttatgaggtcagttggcac < 1:1107412‑M2/91‑33 (MQ=255) cccATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctttgtttatgaggtcagttggcac < 1:1392100‑M2/91‑33 (MQ=255) CCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAtt > 1:3824699‑M1/1‑91 (MQ=255) CCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAtt > 2:2547034‑M1/1‑91 (MQ=255) CCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAtt > 1:1158063‑M1/1‑91 (MQ=255) CCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAttt > 1:1986963‑M1/1‑91 (MQ=255) CCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAAttt > 1:1901524‑M1/1‑91 (MQ=255) CATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTc > 1:3859111‑M1/1‑91 (MQ=255) CATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTc < 2:3464960‑M1/91‑1 (MQ=255) CATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCCTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGCATTTc < 2:240628‑M1/91‑1 (MQ=255) CATACTGATTGAAGACACTAATGTGTCGCACCAAAGTGCACATTACGCTTCAGCTCTATATGCGCGTTCCATTTATTCTTTTGAGAACTTc > 2:1084403‑M1/1‑91 (MQ=255) TACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCAt > 2:2755911‑M1/1‑91 (MQ=255) ACTGATTGAAGACACTAATGTGTTGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCAtt < 1:1737193‑M1/91‑1 (MQ=255) ACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCAtt > 2:3489437‑M1/1‑91 (MQ=255) gATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTa > 2:1903907/1‑91 (MQ=255) gATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATCTTa > 2:3333458/1‑91 (MQ=255) gAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAg < 2:3623523/91‑1 (MQ=255) aGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGAc < 1:3235458/91‑1 (MQ=255) aGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGAc > 2:798433/1‑91 (MQ=255) cacTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCaa > 1:2521271/1‑91 (MQ=255) tAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCaaaaa < 1:369937/91‑1 (MQ=255) tAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCaaaaa < 2:1116472/91‑1 (MQ=255) ttagtgtCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCcaaaaa > 2:482072/4‑91 (MQ=255) aTGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAAt < 2:670100/91‑1 (MQ=255) aTGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAAt < 2:2483142/91‑1 (MQ=255) aTGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAAt < 1:1057434/91‑1 (MQ=255) aTGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAAt > 1:2266699/1‑91 (MQ=255) tgtgTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTTTTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAAtt > 2:3796253/1‑91 (MQ=255) tgtgTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAAtt > 2:2022701/1‑91 (MQ=255) tgtgTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAAtt > 1:2685902/1‑91 (MQ=255) gtgtCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTa < 2:2193424/91‑1 (MQ=255) tCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTaaaa > 2:3772094/1‑91 (MQ=255) tCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTaaaa > 1:3743620/1‑91 (MQ=255) tCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTaaaa > 1:1658785/1‑91 (MQ=255) cGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAAt < 2:3403005/91‑1 (MQ=255) ccATGGTGCAGATTACGCTGCATCTCTGTATGGGCTTTTTATTTATTCTTTTGACAGTTTCATTTCAGCAGAACAAAAAATTAAAATGgtg < 2:2047666/91‑1 (MQ=255) ccATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGgtg > 1:613681/1‑91 (MQ=255) aTGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTc < 2:2312961/91‑1 (MQ=255) aTGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTc > 2:2586858/1‑91 (MQ=255) ggTGCACATTATGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTAAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCa > 2:2729358/1‑91 (MQ=255) ggTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCa < 2:3067455/91‑1 (MQ=255) ggTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCa > 2:1871446/1‑91 (MQ=255) tGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATc > 1:279801/1‑91 (MQ=255) tGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATc < 1:831844/91‑1 (MQ=255) tGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATc < 1:3709074/91‑1 (MQ=255) gCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCa > 1:606601/1‑91 (MQ=255) gCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCa > 1:431902/1‑91 (MQ=255) cacaTTACGCTTCATCTCTgtatgggctttgtttatgaggtcagttggcaccttaagtgcaatacctcgtgagcaaatattaattttgaat > 1:3889242‑M2/1‑19 (MQ=255) cacaTTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCaa < 2:1888033/91‑1 (MQ=255) acaTTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAg < 1:1466210/91‑1 (MQ=255) caTTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGACTTTCATTTTCGCAGACCTAAACACTAAAATGGTGTCTATCACGa > 2:2760628/1‑91 (MQ=255) cGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCttt > 2:2850247/1‑91 (MQ=255) gCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTg > 2:1419592/1‑91 (MQ=255) cTTCATCTTTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACTAAAAAATTAAAATGGTGTCCATCAAGATCTTTGa < 1:667892/91‑1 (MQ=255) cTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGa > 2:1269617/1‑91 (MQ=255) aTCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACAt > 1:2129714/1‑91 (MQ=255) ctctGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTg > 1:977645/1‑91 (MQ=255) tctGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGc < 1:2068240/91‑1 (MQ=255) ctGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCt > 1:1255347/1‑91 (MQ=255) ctGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCt > 1:1627578/1‑91 (MQ=255) | ACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTC > USA300TCH1516_ALE/2716714‑2716894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |