| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | = 1057 | 604 (0.290) | 50 (0.030) | 16/124 | NT | 7.9% | coding (138/192 nt) | USA300HOU_RS15665 | hypothetical protein |
| ? | NC_012417 | = 1071 | 705 (0.440) | coding (124/192 nt) | USA300HOU_RS15665 | hypothetical protein | |||||
Only 100 of 2921 total aligned reads displayed.
GAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTA > NC_012417/967‑1147 | aaaaGCAAATTTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACaa < 2:3903843/91‑1 (MQ=255) aaaGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACaaa > 1:1335768/1‑91 (MQ=255) aaaTTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgt > 1:618797/1‑91 (MQ=255) aaaTTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgt < 1:1904675/91‑1 (MQ=255) aaTTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgta > 1:2296199/1‑91 (MQ=255) aaTTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgta > 2:1306515/1‑91 (MQ=255) aaTTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgta > 1:1636208/1‑91 (MQ=255) aaTTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgta > 1:3146732/1‑91 (MQ=255) attattattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtat > 1:2982775/1‑91 (MQ=255) attattattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtat > 1:364568/1‑91 (MQ=255) ttattattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtatg > 2:3754072/1‑91 (MQ=255) tattattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtatgt > 1:266692/1‑91 (MQ=255) attattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacatacagcat < 1:3075818‑M1/91‑14 (MQ=255) attattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtatgta < 1:1046367/91‑1 (MQ=255) attattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtatgta < 2:1880465/91‑1 (MQ=255) ttattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAg > 1:2836758/1‑91 (MQ=255) tATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGCATGTAGt < 1:1962360‑M2/91‑2 (MQ=255) tAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGAATTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtca > 2:2911927‑M2/1‑86 (MQ=255) gtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTca < 1:402984‑M2/37‑1 (MQ=255) AAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTcac > 2:718441‑M1/1‑91 (MQ=255) agacattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTcaca > 1:448041‑M2/26‑91 (MQ=255) AGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTcaca > 1:1272459‑M1/1‑91 (MQ=255) gccattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaa > 2:52725‑M2/25‑91 (MQ=255) gacattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaa > 2:2680191‑M2/25‑91 (MQ=255) gacattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaa > 1:1706513‑M2/25‑91 (MQ=255) gacattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaa > 2:3835839‑M2/25‑91 (MQ=255) acattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaaa > 1:3494851‑M2/24‑91 (MQ=255) acattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGAAAAATGCTGTATGTAGTGTCACaaa > 2:1704661‑M2/24‑91 (MQ=255) cattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacataa > 1:565528‑M2/23‑88 (MQ=255) cattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaaaa > 1:502749‑M2/23‑91 (MQ=255) cattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaaaa > 1:2907440‑M2/23‑91 (MQ=255) ttagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAAt > 1:2475631‑M2/21‑91 (MQ=255) TTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAAt > 1:2074966‑M1/1‑91 (MQ=255) TTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAAt > 2:239206‑M1/1‑91 (MQ=255) AGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATaa > 2:1962548‑M1/1‑91 (MQ=255) AGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATaa < 1:3712967‑M1/91‑1 (MQ=255) AGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATaa < 1:674396‑M1/91‑1 (MQ=255) AGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATaa < 1:2014758‑M1/91‑1 (MQ=255) GTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAg < 2:1388489‑M1/91‑1 (MQ=255) TGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGa < 2:2013193‑M1/91‑1 (MQ=255) gtTGACTAATGTCTTTTTTTTTGTTTTTTTCTTAAAAACTCATATCTTATTTTTGTAAATAATTCTATATATATTCACTCAAAAATAAgcc > 2:1482798/1‑89 (MQ=255) gACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACaaa > 1:355432/1‑91 (MQ=255) gACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACaaa > 1:953488/1‑91 (MQ=255) taatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGc < 2:3134394‑M2/82‑1 (MQ=255) aatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCa < 1:2147841‑M2/83‑1 (MQ=255) aatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCa < 1:2592824‑M2/83‑1 (MQ=255) atgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCaa > 2:920265‑M2/8‑91 (MQ=255) tcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAatat < 1:857794‑M2/87‑1 (MQ=255) tTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATAtt > 1:2421579‑M2/2‑91 (MQ=255) tTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATAtt > 2:1775798‑M2/2‑91 (MQ=255) tgttgATTTTTTATAAGAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgt > 2:3039127‑M2/1‑88 (MQ=255) gttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtc < 2:2615291‑M2/91‑5 (MQ=255) ttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtca < 1:91444‑M2/91‑6 (MQ=255) gATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcaca < 1:1757464‑M2/91‑8 (MQ=255) aTTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaa > 2:2066829‑M2/1‑83 (MQ=255) aTTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaa < 1:782088‑M2/91‑9 (MQ=255) ttttttATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaa < 2:3572969‑M2/91‑10 (MQ=255) tttttATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaa > 1:3885150‑M2/1‑81 (MQ=255) ttttATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaa > 1:23668‑M2/1‑80 (MQ=255) tttATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaat > 1:1856885‑M2/1‑79 (MQ=255) tataAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataa < 2:1184754‑M2/91‑15 (MQ=255) tataAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataa < 2:2130783‑M2/91‑15 (MQ=255) taAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataaga > 1:1797927‑M2/1‑75 (MQ=255) aaaaatGTACTGTCTTATTTTTGGAACAAATGGTGTATGTAGTTTCACAATAATAAGACAAACGCAATATATTGtgtcacaaagataagac > 2:3677066‑M2/1‑74 (MQ=255) aaaaaGTACTGTCTTCTTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagaca < 1:3376131‑M2/91‑19 (MQ=255) agccgtactGTCTTATTTTTGTGACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaagaagacag > 2:3504698‑M1/5‑26 (MQ=255) aaaaGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagacag > 2:1024111‑M2/1‑72 (MQ=255) tgcgttTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATa < 2:465089‑M2/45‑1 (MQ=255) tACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAg < 1:1098182/91‑1 (MQ=255) aCTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGc < 1:741331/91‑1 (MQ=255) cTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCt > 2:850544/1‑91 (MQ=255) tGTCATATTTTTGTGACAcaatatgtggcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaataagacagtacttttt < 2:3320655‑M1/91‑74 (MQ=255) gTCTTATTTTTGTGACActacatacagcatttggcacaaaaataagacagtacttttttataaaaaatcaacaaaaaagacattagtcaac < 1:1155733‑M1/91‑75 (MQ=255) gTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCttt > 1:2247758/1‑91 (MQ=255) gTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCttt > 2:621245/1‑91 (MQ=255) gTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCttt > 2:1630861/1‑91 (MQ=255) tCTTATTTTTGTGACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaataagacagtactttttta > 2:2755409‑M1/1‑16 (MQ=255) cTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGt < 2:1104761/91‑1 (MQ=255) ttATTTGTGTGACAcaatatagtgcgtttgtcttatttgtgggacactacatacagcatttgtcacaaaaataagacagtacttttttata < 2:2849113‑M1/91‑78 (MQ=255) tATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTAt < 1:1421378/91‑1 (MQ=255) aTTTTTGTGACAcaatatattgcgtttgtcttatttttgtggcactacatacagcatttgtcacaaaaataagacagtacttttttataaa > 1:3423219‑M1/1‑12 (MQ=255) aTTTTGGTGACAcaatatattgcgtgtgtcttattgttgtgacactacatacagcatttgtcacaaaaataagacagtacttttttataaa < 2:2312289‑M1/91‑80 (MQ=255) tttGTGACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaataagacagtacttttttataaaaaa < 2:2207192‑M1/91‑83 (MQ=255) tgtgACAcaatatattgcgtttgtcttatttttgtgacattacatacagcatttgtcacaaaaataagacagtacttttttataaaaaatc > 2:12562‑M1/1‑7 (MQ=255) tgtgACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaataagacagtacttttttataaaaaatc > 2:2517814‑M1/1‑7 (MQ=255) tgtgACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaataagacagtacttttttagaaaaaatc > 2:3433517‑M1/1‑7 (MQ=255) gtgACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCa > 1:119109/1‑91 (MQ=255) tgACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCAc > 1:1001442/1‑91 (MQ=255) tgACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCAc < 2:1551418/91‑1 (MQ=255) gACActacatacagcatttgtcacaaaaataagacagtacttttttataaaaaatcaacaaaaaagacattagtcaacactaatgtcttaa > 1:3848021‑M1/1‑4 (MQ=255) gACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaataagacagtacttttttataaaaaatcaac > 1:1509879‑M1/1‑4 (MQ=255) gACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaataagacagtacttttttataaaaaatcaac > 1:2762610‑M1/1‑4 (MQ=255) gACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACt > 2:3222952/1‑91 (MQ=255) gACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACt > 1:1580031/1‑91 (MQ=255) gACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACt > 1:2532585/1‑91 (MQ=255) gACAAATGCCGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACt < 1:3791961/91‑1 (MQ=255) acactacatacagcatttgtcacaaaaataagacagtacttttttataaaaaatcaacaaaaaagacattagtcaacactaatgtcttaaa > 1:3203790‑M1/1‑3 (MQ=255) cAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACttt < 2:412385/91‑1 (MQ=255) actacatacagcatttgtcacaaaaataagacagtacttttttataaaaaatcaacaaaaaagacattagtcaacactaatgtcttaaata < 1:3285364‑M1/91‑91 (MQ=255) actacatacagcatttgtcacaaaaataagacagtacttttttataaaaaatcaacaaaaaagacattagtcaacactaatgtcttaaata < 2:79233‑M1/91‑91 (MQ=255) | GAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTA > NC_012417/967‑1147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |