| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 221178 = | 144 (0.710) | 31 (0.170) | 11/146 | NT | 17.9% | intergenic (‑224/+50) | ipdC/ptsG_1 | Indole‑3‑pyruvate decarboxylase/PTS system glucose‑specific EIICBA component |
| ? | USA300TCH1516_ALE | 221218 = | 153 (0.820) | intergenic (‑264/+10) | ipdC/ptsG_1 | Indole‑3‑pyruvate decarboxylase/PTS system glucose‑specific EIICBA component | |||||
Only 100 of 254 total aligned reads displayed.
GAAGGGGGGCTTTAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCAAATGAAATGTTGC > USA300TCH1516_ALE/221088‑221268 | gaaacgttacaaaccttgattttaatcaaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactata > 1:3678908‑M1/91‑91 (MQ=255)gaaacattacaaaccttgattttaaacaaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactata < 1:2269583‑M1/1‑1 (MQ=255)gAAGGGGGGCTTTAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAA < 1:2371043‑M1/91‑1 (MQ=255) aaGGGGGGCTTTAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAA < 1:1513191‑M1/91‑1 (MQ=255) aaGGGGGGCTTTAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAA > 2:3856451‑M1/1‑91 (MQ=255) aGGGGGGCTTTAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAA < 2:130613‑M1/91‑1 (MQ=255) ggggggCTTTAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAAC > 2:1122116‑M1/1‑91 (MQ=255) gggggCTTTAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACA > 1:3775469‑M1/1‑91 (MQ=255) cattacaaaccttgattttaaacaaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACa > 2:2833004‑M1/87‑91 (MQ=255) ggggCTTTAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAG > 1:484239‑M1/1‑91 (MQ=255) ttacaaaccttgattttaaacaaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAgg > 1:1338574‑M1/85‑91 (MQ=255) ttacaaaccttgattttaaacaaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAgg > 2:192575‑M1/85‑91 (MQ=255) ttacaaaccttgattttaaacaaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAgg > 1:24580‑M1/85‑91 (MQ=255) ggCCTTAACTGATGATCTTAAAATTCAAAACTTAAGGGGAGAGCGAACTATCATTGATGCTGCAAAACACAATAGCCAAGAAAAAACAGgc > 2:2525924/1‑91 (MQ=255) gcgttAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGGACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGgcg < 2:474530/88‑1 (MQ=255) gCTTTAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGgcg < 1:1011360/91‑1 (MQ=255) cTTTAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGgcgc > 1:19183/1‑91 (MQ=255) aaTTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCa < 2:1151552/91‑1 (MQ=255) aTTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCAc < 2:1254103/91‑1 (MQ=255) ttGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCAcc < 1:3217206/91‑1 (MQ=255) atgatCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTa > 2:821289/1‑91 (MQ=255) tgatCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTAt > 2:1035158/1‑91 (MQ=255) gatCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATg < 1:2881582/91‑1 (MQ=255) atCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGa < 1:2118931/91‑1 (MQ=255) taaacaaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAGGTGCGTCACCTTATGaa > 1:2787842‑M1/69‑91 (MQ=255) tCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGTGTCACCTTATGaa > 1:3957149/1‑91 (MQ=255) tCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGaa > 1:681052/1‑91 (MQ=255) cTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAg < 1:1564198/91‑1 (MQ=255) ttAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTGACCTTATGAAgg < 1:3041708/91‑1 (MQ=255) aacaaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAGGCGCGTCACCTTATGAAgg > 1:109337‑M1/67‑91 (MQ=255) aacaaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaagaatgcttactatAAACAGGCGCGTCACCTTATGAAgg > 1:3343839‑M1/67‑91 (MQ=255) tAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGt < 1:568305/91‑1 (MQ=255) tAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGt < 2:2249872/91‑1 (MQ=255) aaaaaTTCAAAATTTAAGGGGAGAGCGAACTATCAATGAGGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGt < 2:298987/90‑1 (MQ=255) cgaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAGGCGCGTCACCTTATGAAGGta > 2:1738893‑M1/65‑91 (MQ=255) caaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAGGCGCGTCACCTTATGAAGGta > 1:1076088‑M1/65‑91 (MQ=255) caaggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAGGCGCGTCACCTTATGAAGGta > 1:3356491‑M1/65‑91 (MQ=255) aaaTTCACAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGtat > 2:1674171/1‑91 (MQ=255) aaaTTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGtgcgtataccttcataaggtg < 1:2628342‑M1/91‑22 (MQ=255) aaaTTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGtat < 1:1812387/91‑1 (MQ=255) aaaTTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGtat > 1:3207011/1‑91 (MQ=255) aggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAGGCGCGTCACCTTATGAAGGtata > 2:923389‑M1/63‑91 (MQ=255) ggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAGGCGCGTCACCTTATGAAGGTATAc > 1:3442780‑M1/62‑91 (MQ=255) ggtgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAGGCGCGTCACCTTATGAAGGTATAc > 1:998838‑M1/62‑91 (MQ=255) aTTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATAc < 1:2280238/91‑1 (MQ=255) tgaacatggcaacatttcatttggcgatcaattatttgaagctaaataatgcttactatAAACAGGCGCGTCACCTTATGAAGGTATACGc > 2:2260454‑M1/60‑91 (MQ=255) cAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCa > 2:3493404/1‑91 (MQ=255) aaaTTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGtgcgtataccttcataaggtgacgcgcc < 1:2957647‑M1/91‑29 (MQ=255) aaaTTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGtgcgtataccttcataaggtgacgcgcc < 1:1288905‑M1/91‑29 (MQ=255) aaTTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCAcct > 1:111445‑M2/1‑88 (MQ=255) aaTTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCAcct < 1:1794233‑M2/91‑4 (MQ=255) aaTTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCAcct > 1:3434536‑M2/1‑88 (MQ=255) aTTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGtgcgtataccttcataaggtgacgcgcctg < 2:1432207‑M1/91‑31 (MQ=255) aTTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCAcctg > 2:2054161‑M2/1‑87 (MQ=255) ttAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGtgcgtataccttcataaggtgacgcgcctgtt < 2:288732‑M1/91‑33 (MQ=255) ttAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCAcctgtt > 1:2670790‑M2/1‑85 (MQ=255) aaGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTta < 1:1461063/91‑1 (MQ=255) aGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTtat < 2:1551693/91‑1 (MQ=255) ggggAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGACAAAACAGGCGCGCCACCTTATGAAGGTATACGCACCTGTTtata > 1:3153486/1‑91 (MQ=255) ggggAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTtata > 2:2448089/1‑91 (MQ=255) ggggAGAGCGAACTACCAATGATCCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCGGATGAAGGTATACACCCCTGATtata > 2:3286686/1‑91 (MQ=255) ggAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGt < 2:2341885/91‑1 (MQ=255) agCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGc > 2:3908871/1‑91 (MQ=255) gCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCa > 2:510468/1‑91 (MQ=255) gAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCatt < 1:586617/91‑1 (MQ=255) gAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCatt > 1:2753304/1‑91 (MQ=255) aaCTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCatta > 1:214532/1‑91 (MQ=255) gtATCAAGGAGGCGGCAAAATACGAGAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCattatt < 2:3750957/90‑1 (MQ=255) tATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTAttt < 2:2949900/91‑1 (MQ=255) tCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAg > 1:556934/1‑91 (MQ=255) tCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAg < 1:938357/91‑1 (MQ=255) aaTGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCt > 1:742442/1‑91 (MQ=255) aaTGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCt < 1:119041/91‑1 (MQ=255) aaTGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCt < 1:1354084/91‑1 (MQ=255) aaTGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCt < 2:2860435/91‑1 (MQ=255) aaTGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTATTTATAGTAAGCATTATTTAGCt > 2:3607386/1‑91 (MQ=255) tgctgcAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCaaa < 2:1786481/91‑1 (MQ=255) tgctgcAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCaaa < 1:1310410/91‑1 (MQ=255) tgctgcAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCaaa < 1:3087896/91‑1 (MQ=255) aTACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATc < 1:1718379/91‑1 (MQ=255) tACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTTAGCATTATTTAGCTTCAAATAATTGATCg < 1:1425811/91‑1 (MQ=255) aCAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGc < 2:1577442/91‑1 (MQ=255) aCAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGc < 1:2203446/91‑1 (MQ=255) aaTAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCa < 1:1020778/91‑1 (MQ=255) aTAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCaa > 2:2698029/1‑91 (MQ=255) aTAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCaa > 2:2687837/1‑91 (MQ=255) aTAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCaa > 1:3834582/1‑91 (MQ=255) tAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCCTTATTTAGCTTCAAATAATTGATCGCCaaa > 2:2143604/1‑91 (MQ=255) aGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCaaat < 2:3331622/91‑1 (MQ=255) cAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCaaatga < 2:3405999/91‑1 (MQ=255) cAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCaaatga < 1:1278425/91‑1 (MQ=255) aaaaGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCaaatga < 2:717332/90‑1 (MQ=255) aaaGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCaaatgaa > 1:1840032/1‑91 (MQ=255) aaGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCaaatgaaa < 2:3697013/91‑1 (MQ=255) aGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCaaatgaaat > 2:3163138/1‑91 (MQ=255) aaaaaCAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCAAATGAAATGtt < 2:3425884/91‑1 (MQ=255) aaaaaCAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCAAATGAAATGtt > 1:2877998/1‑91 (MQ=255) aaaaCAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCAAATGAAATGTTg > 1:2335948/1‑91 (MQ=255) aaaCAGGtgcgtataccttcataaggtgacgcgcctgttttttctttgctattgtattttgcagcatcattgatagttcgctctcccctta < 2:3746976‑M1/91‑85 (MQ=255) aaaCAGGtgcgtataccttcataaggtgacgcgcctgttttttctttgctattgtattttgcagcatcattgatagttcgctctcccctta < 1:3753371‑M1/91‑85 (MQ=255) | GAAGGGGGGCTTTAATTGATGATCTTAAAATTCAAAATTTAAGGGGAGAGCGAACTATCAATGATGCTGCAAAATACAATAGCAAAGAAAAAACAGGCGCGTCACCTTATGAAGGTATACGCACCTGTTTATAGTAAGCATTATTTAGCTTCAAATAATTGATCGCCAAATGAAATGTTGC > USA300TCH1516_ALE/221088‑221268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |