| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 365029 = | 120 (0.590) | 17 (0.100) | 6/136 | NT | 12.4% | intergenic (+39/+66) | nupC_1/sglT | Nucleoside permease NupC/Sodium/glucose cotransporter |
| ? | USA300TCH1516_ALE | 365083 = | 138 (0.800) | intergenic (+93/+12) | nupC_1/sglT | Nucleoside permease NupC/Sodium/glucose cotransporter | |||||
Only 100 of 255 total aligned reads displayed.
TTCAACTCTAGCTTCAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTAGCCGTTTTTGAA > USA300TCH1516_ALE/364939‑365119 | tCAACTCTAGCTTCAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCGAAGCTAA > 1:1956080‑M1/1‑91 (MQ=255) aagatataacgggattaacaatttttgaaaaagataaaccatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataaa < 2:402213‑M1/2‑1 (MQ=255) aagatataacgggattaacaatttttgaaaaagataaaccatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataaa < 2:2671504‑M1/2‑1 (MQ=255) cAACTCTAGCTTCAATCATTTCAGGATCAATCATTGGCTTCGTATCGTAAATGCAACGAAGTACCTACATTAAATTCATGGCAAAGCTCAA > 2:169493‑M1/1‑91 (MQ=255) cAACTCTAGCTTCAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAA < 2:148531‑M1/91‑1 (MQ=255) aaCTCTAGCTTCAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAAC > 2:2794019‑M1/1‑91 (MQ=255) aCTCTAGCTTCAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACC > 1:3018561‑M1/1‑91 (MQ=255) tataacgggattaacaatttttgaaaaagataaaccatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataAAAccc > 1:3846946‑M1/86‑91 (MQ=255) ctctAGCTTCAATTATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAATTTCATGGCTAAGCTAATCCC > 2:2802794‑M1/1‑91 (MQ=255) taacgggattaacaatttttgaaaaagataaaccatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataAAACCCCg > 2:2593015‑M1/84‑91 (MQ=255) taacgggattaacaatttttgaaaaagataaaccatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataAAACCCCg < 1:3591987‑M1/8‑1 (MQ=255) acgggattaacaattgttgaaaaagataaaccatcaacatacatttcaaatacggctactaaaaagtagattgtttttataAAACCCCgtt < 1:1174996‑M1/10‑2 (MQ=255) aGCTTCAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTC > 2:90224‑M1/1‑91 (MQ=255) gCTTCAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCA < 1:1117118‑M1/91‑1 (MQ=255) gggattaacaatttttgaaaaagataaaccatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataAAACCCCGTCAc < 2:165665‑M1/12‑1 (MQ=255) cTTCAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCAC < 2:3862674‑M1/91‑1 (MQ=255) ttCAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCAcc < 1:2426855/91‑1 (MQ=255) tCAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCa < 1:3450878/91‑1 (MQ=255) cAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCaa > 1:2194087/1‑91 (MQ=255) aTTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTgg < 2:2486443/91‑1 (MQ=255) aTTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTgg > 1:2288224/1‑91 (MQ=255) ttCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGgcg < 2:2452758/91‑1 (MQ=255) tCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGgcgc > 2:1714128/1‑91 (MQ=255) tCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGgcgc < 2:2490704/91‑1 (MQ=255) tCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGgcgc < 2:241374/91‑1 (MQ=255) cAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCa < 2:1425867/91‑1 (MQ=255) aGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCaa < 1:908993/91‑1 (MQ=255) ggATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAAc > 1:3233405/1‑91 (MQ=255) ggATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAAc < 1:2310400/91‑1 (MQ=255) gATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACtaagttatgatgcgc < 1:1827889‑M1/91‑16 (MQ=255) tcaatcaTTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAgc > 2:3873580/1‑91 (MQ=255) atcaTTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGca < 2:3063093/91‑1 (MQ=255) atcaTTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGca < 2:3419352/91‑1 (MQ=255) tcaTTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGcat < 1:1371246/91‑1 (MQ=255) tcaTTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGcat > 2:1871679/1‑91 (MQ=255) tcaTTGGCTTAGTATTGTAAATGAATCAAAGTACCTAAATTAAATTCCTGGCAAAGCTAATCCCCGTCACCAAGTTGGCGCAACAGCGcat < 2:1994466/91‑1 (MQ=255) aaccatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATaa > 1:405637‑M1/54‑91 (MQ=255) aaccatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATaa > 1:735473‑M1/54‑91 (MQ=255) aaccatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATaa > 1:1521778‑M1/54‑91 (MQ=255) gCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACtaagttatgatgcgctgttgcgccaac < 1:3649699‑M1/91‑28 (MQ=255) gCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACtaagttatgatgcgctgttgcgccaac < 1:3077986‑M1/91‑28 (MQ=255) gCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAGGTTGGCGCAACAGCGCATCATAAc < 2:826373/91‑1 (MQ=255) gCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAAc < 2:1845633/91‑1 (MQ=255) accatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAAc > 1:3738373‑M1/53‑91 (MQ=255) accatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAAc > 1:891459‑M1/53‑91 (MQ=255) ccatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACt > 1:110094‑M1/52‑91 (MQ=255) ccatcaacatacatttcaaaaacggctacgaaaaagtagattgttatgataAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACt > 1:2047989‑M1/52‑91 (MQ=255) cTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACtaagttatgatgcgctgttgcgccaact < 1:1732329‑M1/91‑29 (MQ=255) ttAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACtaagttatgatgcgctgttgcgccaactt < 2:3533992‑M1/91‑30 (MQ=255) ttAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACtaagttatgatgcgctgttgcgccaactt < 1:2560179‑M1/91‑30 (MQ=255) gtaGTATTGTAAATGAATCGAAGTACCTAAATTAAAGTCATGGCAAAGCTAAACCCCGTCACtaagtgatgatgcgctgttgcgccaactt < 2:3917942‑M1/90‑30 (MQ=255) catcaacatacattgcaaaaacggctacgaaaaagtagattgttatgataAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACtt > 2:723357‑M1/51‑91 (MQ=255) tAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACtaagttatgatgcgctgttgcgccaacttg < 1:642266‑M1/91‑31 (MQ=255) tAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACtaagttatgatgcgctgttgcgccaacttg < 2:2316883‑M1/91‑31 (MQ=255) tATTGTGAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCAGCAAGTTGGCGCAACAGCGCATCATAACTTAgtg > 2:556211‑M2/1‑88 (MQ=255) tGTAAATGAATCGAAGTACCTAAATTAAGTTCATGGCAAAGCTAAACCCCGTCACtaagttatgatgcgctgttgcgccaacttggtgacg < 2:3041883‑M1/91‑37 (MQ=255) tGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAgtgacg > 1:1791415‑M2/1‑85 (MQ=255) tGTAAATGAATCCAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAgtgacg < 1:3050265‑M2/91‑7 (MQ=255) aaaTGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAgtgacgggg > 1:2051288‑M2/1‑82 (MQ=255) aaaTGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAgtgacgggg > 2:3225668‑M2/1‑82 (MQ=255) aaTCGAAGTACCTATATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTa > 2:3560957/1‑91 (MQ=255) aaTCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTa > 1:1703791/1‑91 (MQ=255) aTCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTAt > 1:1680085/1‑91 (MQ=255) tCGAAGTACCTAAATTGAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATc < 2:3782707/91‑1 (MQ=255) tCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATc < 2:659486/91‑1 (MQ=255) cGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCa > 1:2620021/1‑91 (MQ=255) cGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCa < 1:298361/91‑1 (MQ=255) tACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACa > 1:1228344/1‑91 (MQ=255) tACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACa < 2:2909508/91‑1 (MQ=255) aCCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACaa < 2:2263540/91‑1 (MQ=255) aCCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACaa < 1:291180/91‑1 (MQ=255) cTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATc > 2:3215162/1‑91 (MQ=255) cTAAATTAAATTCATAGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATc > 1:3376669/1‑91 (MQ=255) taaattaaatTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCt < 2:2736098/91‑1 (MQ=255) aaattaaattCATGGCAAAGCTAAACCCCGTCGCCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTa < 1:473414/91‑1 (MQ=255) aaattaaattCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTa < 1:3268953/91‑1 (MQ=255) aaattaaatcCATGGCAAAGCTAAACCCCGGCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTa < 1:2789799/91‑1 (MQ=255) aattaaattCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTAc > 1:719735/1‑91 (MQ=255) aattCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACttttt > 2:1177990/1‑91 (MQ=255) ttCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCg > 1:2517670/1‑91 (MQ=255) ttCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCg > 1:609287/1‑91 (MQ=255) tCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTctt > 2:123715/1‑89 (MQ=255) tCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGt < 2:1505095/91‑1 (MQ=255) tCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGt < 2:2161867/91‑1 (MQ=255) tCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGt > 1:2001324/1‑91 (MQ=255) cATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTa < 2:334570/91‑1 (MQ=255) cATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTa > 1:882759/1‑91 (MQ=255) aTGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTAg < 2:1906655/91‑1 (MQ=255) tGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTAGc > 1:2447729/1‑91 (MQ=255) aaGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTAGCCGttt < 1:2807214/91‑1 (MQ=255) aGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTAGCCGtttt > 1:3508346/1‑91 (MQ=255) aGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTAGCCGtttt < 1:2701277/91‑1 (MQ=255) aGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTAGCCGtttt < 1:2486270/91‑1 (MQ=255) gCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTAGCCGttttt < 1:826915/91‑1 (MQ=255) cTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTAGCCGTTTTTg > 1:2127462/1‑91 (MQ=255) aaaCCCCGTTACtaagttatgatgcgctgttgcgccaacttggtgacggggtttagctttgccatgaatttaatttaggtacttcgattca < 1:3795173‑M1/91‑80 (MQ=255) aaaCCCCGTCACtaagttatgatgcgctgttgcgccaacttggtgacggggtttagctttgccatgaatttaatttaggtacttcgattca < 2:3710811‑M1/91‑80 (MQ=255) aaaCCCCGTCACtaagttatgatgcgctgttgcgccaacttggtgacggggtttagctttgccatgaatttaatttaggtacttcgattca < 2:3710979‑M1/91‑80 (MQ=255) aaaCCCCGTCACtaagttatgatgcgctgttgcgccaacttggtgacggggtttagctttgccatgaatttaatttaggtacttcgattca < 2:2135322‑M1/91‑80 (MQ=255) AAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTAGCCGTTTTTGaa < 1:3378557‑M1/91‑1 (MQ=255) | TTCAACTCTAGCTTCAATCATTTCAGGATCAATCATTGGCTTAGTATTGTAAATGAATCGAAGTACCTAAATTAAATTCATGGCAAAGCTAAACCCCGTCACCAAGTTGGCGCAACAGCGCATCATAACTTAGTGACGGGGTTTTATCATAACAATCTACTTTTTCGTAGCCGTTTTTGAA > USA300TCH1516_ALE/364939‑365119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |