| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1834069 | 142 (0.700) | 8 (0.050) | 5/138 | NT | 6.0% | intergenic (+18/‑96) | osmC/USA300HOU_RS09140 | Peroxiredoxin OsmC/Soluble hydrogenase 42 kDa subunit |
| ? | USA300TCH1516_ALE | = 1834086 | 130 (0.740) | intergenic (+35/‑79) | osmC/USA300HOU_RS09140 | Peroxiredoxin OsmC/Soluble hydrogenase 42 kDa subunit | |||||
Only 100 of 253 total aligned reads displayed.
ATGCTGTAAGAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCAT > USA300TCH1516_ALE/1833996‑1834176 | aTGCTGTAAGAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAg > 1:3828785/1‑91 (MQ=255) gcctcctataaataagatttcactattttagcaaattttctgaaaatttaaaagcctaaaaAAGTGATAACGTTTGTTCGACAATATAGCg > 1:3793411‑M1/62‑91 (MQ=255) cTGTAAGAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgt > 1:1914956‑M2/1‑88 (MQ=255) cTGTAAGAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgt > 1:912026‑M2/1‑88 (MQ=255) tGTAAGAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgtt < 1:4067‑M2/91‑5 (MQ=255) gTAAGAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgtta < 1:955715‑M2/91‑6 (MQ=255) gTAAGAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgtta < 1:615518‑M2/91‑6 (MQ=255) gTAAGAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgtta > 1:342981‑M2/1‑86 (MQ=255) tAAGAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgttat > 1:1540687‑M2/1‑85 (MQ=255) tAAGAAATAATGTGGACATAAAAATCTATCCCATCATACAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgttat < 1:3343168‑M2/91‑7 (MQ=255) ctataaataagatttcactattttagcaaattttctgaaaatttaaaagcctaaaaAAGTGATAACGTTTGTTCGACAATATAGCGTTATc > 1:844467‑M1/57‑91 (MQ=255) ctataaataagatttcactattttagcaaattttctgaaaatttaaaagcctaaaaAAGTGATAACGTTTGTTCGACAATATAGCGTTATc > 2:2988595‑M1/57‑91 (MQ=255) ctataaataagatttcactattttagcaaattttctgaaaatttaaaagcctaaaaAAGTGATAACGTTTGTTCGACAATATAGCGTTATc > 1:3242389‑M1/57‑91 (MQ=255) aaGAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgttatc > 2:3810899‑M2/1‑84 (MQ=255) gAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgttatcac < 2:1479797‑M2/91‑10 (MQ=255) aataatGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgttatcactt > 1:1576259‑M2/1‑80 (MQ=255) aataatGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGcgttatcactt > 1:647737‑M2/1‑80 (MQ=255) ataatGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACttt < 1:1756639/91‑1 (MQ=255) ataatGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACttt < 2:2774721/91‑1 (MQ=255) aatGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACttttt < 2:2959659/91‑1 (MQ=255) atGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACtttttt > 2:1318143/1‑91 (MQ=255) aagatttcactattttagcaaattttctgaaaatttaaaagcctaaaaAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACtttttt > 1:3934847‑M1/49‑91 (MQ=255) tgtgGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTa > 1:293520/1‑91 (MQ=255) ggACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGc > 2:3361278/1‑91 (MQ=255) ggACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGc > 1:1038423/1‑91 (MQ=255) aCATAAAAATCTATCCCATCATTCGGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCtt < 1:2022539/91‑1 (MQ=255) aCATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCtt < 2:926238/91‑1 (MQ=255) aCATAAAAATCTATCCCATCATTCAGGCCAAAGAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCtt < 1:3364951/91‑1 (MQ=255) cATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCttt < 1:546211/91‑1 (MQ=255) cATAAAAATCTATCCCATCATTCAGACCAAATAAAATCGTAAAGTGATAACGTTTGTTCGACAATAGAGCGTTATCACTTTTTTAGGCttt > 2:3665708/1‑91 (MQ=255) aTAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCtttt < 1:1665347/91‑1 (MQ=255) aaaaaTCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTaa > 2:2077265/1‑91 (MQ=255) aaaaTCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTaaa > 1:233202/1‑91 (MQ=255) cTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTc < 2:481385/91‑1 (MQ=255) cTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTc < 2:2603838/91‑1 (MQ=255) cTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTc < 2:2778250/91‑1 (MQ=255) tATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCa < 1:2906170/91‑1 (MQ=255) tCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGa > 2:870326/1‑91 (MQ=255) tCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGa > 1:2537819/1‑91 (MQ=255) tCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGa > 2:1723203/1‑91 (MQ=255) cccATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGaa > 2:2886818/1‑91 (MQ=255) cccATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGaa < 1:2031988/91‑1 (MQ=255) ccATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCTGaaa < 1:3914220/91‑1 (MQ=255) catcatTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGaaaa < 1:282362/91‑1 (MQ=255) ttCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGc > 2:2781292/1‑91 (MQ=255) tCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCt < 2:3862165/91‑1 (MQ=255) tCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCt < 1:2457942/91‑1 (MQ=255) aGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTaa > 2:3416190/1‑91 (MQ=255) aGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTaa > 1:1443271/1‑91 (MQ=255) ggCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTaaa > 1:2259363/1‑91 (MQ=255) ccAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAAt < 2:3704745/91‑1 (MQ=255) ccAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAAt < 2:2351706/91‑1 (MQ=255) gaaaTAAAATCGTTAAGTGATAACGTTTGTTCGACACTATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATa < 2:3919384/90‑1 (MQ=255) aaaTAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAg < 2:3066223/91‑1 (MQ=255) aaaTAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAg < 2:657163/91‑1 (MQ=255) aaTAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGt > 2:3737339/1‑91 (MQ=255) aTAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTg < 2:1827795/91‑1 (MQ=255) aaaTCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGaaa > 2:1696452/1‑91 (MQ=255) aaaTCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGaaa > 2:423424/1‑91 (MQ=255) aaTCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAGAt > 2:1290387/1‑91 (MQ=255) aaTCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAAt < 1:1278766/91‑1 (MQ=255) aaTCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAAt > 2:1297475/1‑91 (MQ=255) aTCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATc > 2:3446528/1‑91 (MQ=255) cGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCtt > 1:938876/1‑91 (MQ=255) gTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCtta > 1:523242/1‑91 (MQ=255) ttAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAGAATAGTGAAATCttat < 2:3779179/91‑1 (MQ=255) ttAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCttat < 2:2577403/91‑1 (MQ=255) ttAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCttat < 2:2647992/91‑1 (MQ=255) ttAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCttat < 2:1055842/91‑1 (MQ=255) tAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCttatt < 1:1260489/91‑1 (MQ=255) tAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCttatt < 1:3647951/91‑1 (MQ=255) GATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTATTCTTTTAAATTTTCAGAAAATTTGCTAAAATATTGAAATCTTATTTATag < 2:554968‑M1/91‑1 (MQ=255) GATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAAGTTGCTAAAATAGTGAAATCTTATTTATag < 1:2186382‑M1/91‑1 (MQ=255) aTAACGTTTGTTCGACAATATAGcgttatcacttaacgattttatttggcctgaatgatgggatagatttttatgtccacattatttctta < 2:1979139‑M2/91‑69 (MQ=255) TAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATagga > 2:3800564‑M1/1‑91 (MQ=255) AACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATaggag < 1:820903‑M1/91‑1 (MQ=255) ACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATaggagg < 1:1111961‑M1/91‑1 (MQ=255) ACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATaggagg > 2:3838321‑M1/1‑91 (MQ=255) ACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATaggagg > 2:2109243‑M1/1‑91 (MQ=255) ACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATaggagg > 1:2972725‑M1/1‑91 (MQ=255) gtttgtttGACAATATAGCGTTATCACTTGTTTAGGCTTTTAATTTTTCAGAAAATTAGCTAAAATAGTGGGATCTTATTTAGTGGAGGCa < 2:762549/91‑1 (MQ=255) GTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCa < 1:909148‑M1/91‑1 (MQ=255) tttGTTCGACAATATAGcgttatcacttaacgattttatttggcctgaatgatgggatagatttttatgtccacattatttcttacagcat < 1:1018861‑M2/91‑75 (MQ=255) tttGTTCGACAATATAGcgttatcacttaacgattttatttggcctgaatgatgggatagatttttatgtccacattatttcttacagcat < 2:2425698‑M2/91‑75 (MQ=255) ttGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCata < 1:3446543/91‑1 (MQ=255) tGTTCGACAATATAGCGTTATCACTTTTTTAGTCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCatat > 2:3606811/1‑91 (MQ=255) tGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCatat > 2:354039/1‑91 (MQ=255) tGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCatat < 1:1157528/91‑1 (MQ=255) tGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCatat > 2:81343/1‑91 (MQ=255) gTTCGACAATATAGCGTTATCACTTTTTTAGTCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCattta > 2:820158/1‑88 (MQ=255) ttCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATaa < 2:2290307/91‑1 (MQ=255) tCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATaaa < 2:2771867/91‑1 (MQ=255) ataGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGtattat > 2:3492033/1‑91 (MQ=255) ataGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGtattat > 1:505775/1‑91 (MQ=255) taGCGTTATCACTTTTTTCGGCTTTTAAATTTTCAGACAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTatc > 1:1333209/1‑91 (MQ=255) taGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTatc > 1:1333233/1‑91 (MQ=255) aGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTatca < 2:84746/91‑1 (MQ=255) aGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTatca < 1:1873957/91‑1 (MQ=255) gCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTatcat < 1:1925490/91‑1 (MQ=255) gCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTatcat < 1:2671424/91‑1 (MQ=255) | ATGCTGTAAGAAATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCAT > USA300TCH1516_ALE/1833996‑1834176 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |