| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2444885 | 165 (0.810) | 20 (0.110) | 10/140 | NT | 11.4% | intergenic (‑38/+187) | mleN_2/USA300HOU_RS12595 | Malate‑2H(+)/Na(+)‑lactate antiporter/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2444897 | 167 (0.940) | intergenic (‑50/+175) | mleN_2/USA300HOU_RS12595 | Malate‑2H(+)/Na(+)‑lactate antiporter/hypothetical protein | |||||
Only 100 of 242 total aligned reads displayed.
GGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCA > USA300TCH1516_ALE/2444808‑2444986 | ggAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAa < 1:2491734‑M2/91‑2 (MQ=255) aataatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAaga > 2:2615913‑M2/1‑88 (MQ=255) aataatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAaga > 1:3864661‑M2/1‑88 (MQ=255) taatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaa > 1:2624905‑M2/1‑86 (MQ=255) taatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaa > 1:183723‑M2/1‑86 (MQ=255) taatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaa > 1:1340978‑M2/1‑86 (MQ=255) taatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTGCTCACAAACGATGAagaaa > 2:3405030‑M2/1‑86 (MQ=255) taatGCCCAAGCATTGCTCTTTGTATGTACTTCCATGCTTTTTACCTGATTAAGAAGAAAAAATACCTCTTTCTCACAAACGATGAagaaa > 2:605417‑M2/1‑86 (MQ=255) aatGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaag > 1:1884350‑M2/1‑85 (MQ=255) atGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaaga < 2:2003691‑M2/91‑8 (MQ=255) tGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaagag < 1:3703311‑M2/91‑9 (MQ=255) gCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAagaaagagg > 2:3832681‑M2/1‑82 (MQ=255) ccAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTGCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGtt > 2:3543854/1‑91 (MQ=255) ccAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGtt < 2:2971833/91‑1 (MQ=255) cAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGttt < 1:717475/91‑1 (MQ=255) cAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGttt < 1:874448/91‑1 (MQ=255) aGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTc < 2:3108482/91‑1 (MQ=255) gCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCa > 1:490047/1‑91 (MQ=255) gCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCa > 1:1534872/1‑91 (MQ=255) gCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCa > 1:3547236/1‑91 (MQ=255) aTTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtg < 1:1711890/91‑1 (MQ=255) tGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtgtg < 1:3488746/91‑1 (MQ=255) tGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCAtgtg > 2:1868353/1‑91 (MQ=255) gCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGc < 1:2294459/91‑1 (MQ=255) gCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGc < 2:2519565/91‑1 (MQ=255) ctctTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCt > 1:1986048/1‑91 (MQ=255) tctTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCtt < 2:1146871/91‑1 (MQ=255) tctTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCtt > 1:1391895/1‑91 (MQ=255) tctATTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCGCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCtt < 2:1448182/91‑1 (MQ=255) ctTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCttt > 2:2889381/1‑91 (MQ=255) aTGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGc < 1:2353514/91‑1 (MQ=255) tGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCt < 1:1007095/91‑1 (MQ=255) gTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCtt > 1:276406/1‑91 (MQ=255) gTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCtt < 1:2858581/91‑1 (MQ=255) tACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTa > 1:968331/1‑91 (MQ=255) cTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATc < 1:1793378/91‑1 (MQ=255) tCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCtt < 1:2701536/91‑1 (MQ=255) tCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCtt < 1:418986/91‑1 (MQ=255) ccATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTc > 2:2756967/1‑91 (MQ=255) ccATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTc < 1:1293910/91‑1 (MQ=255) tCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCaaa < 1:1231243/91‑1 (MQ=255) ccTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAAc < 2:718391/91‑1 (MQ=255) cTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAAcc < 1:2057638/91‑1 (MQ=255) tttttACCTGCTTTCCAATTAAGAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCa < 2:1744597/91‑1 (MQ=255) tttttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCa < 2:2444825/91‑1 (MQ=255) ttttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCAt < 2:3001690/91‑1 (MQ=255) tttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGAAGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCAtt < 2:402464/91‑1 (MQ=255) ttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTa < 2:925135/91‑1 (MQ=255) ttACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTa > 1:3250801/1‑91 (MQ=255) tACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTAc > 1:1163129/1‑91 (MQ=255) aCCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACg > 1:3644856/1‑91 (MQ=255) aCCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACg > 1:3086525/1‑91 (MQ=255) ccTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACgg > 2:1053291/1‑91 (MQ=255) tGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGtt < 2:868814/91‑1 (MQ=255) ttttttCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCTTTACGGTTa > 2:2707822/3‑91 (MQ=255) gCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTa < 1:1675386/91‑1 (MQ=255) cTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTAc < 2:1281951/91‑1 (MQ=255) tttCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACt < 1:3156182/91‑1 (MQ=255) ccAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGa > 2:1015152/1‑91 (MQ=255) cAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGaa < 2:3317499/91‑1 (MQ=255) cAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGaa < 1:1478322/91‑1 (MQ=255) aaTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAAt < 1:3487393/91‑1 (MQ=255) aTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAAtt > 1:2276961/1‑91 (MQ=255) aTTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCGGCTTATCTGCAAACCATTACGGTTACTGGAAtt < 2:693287/91‑1 (MQ=255) tAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTgg < 2:511802/91‑1 (MQ=255) tACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACCtt > 1:1197246/1‑91 (MQ=255) ccTCTTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggc < 2:2588914‑M2/91‑71 (MQ=255) ccTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCg < 2:2189589/91‑1 (MQ=255) ccTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCg > 1:671613/1‑91 (MQ=255) ctctTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggca < 2:432538‑M2/91‑72 (MQ=255) tctTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCgag > 2:2410576/1‑91 (MQ=255) ctTTCTCACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcatt < 1:3037766‑M2/91‑74 (MQ=255) ctTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCgaga > 1:2917731/1‑91 (MQ=255) ctTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCgaga < 2:1951953/91‑1 (MQ=255) tttCTCACAAACGATGAAGGAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGAt > 2:1265634/1‑91 (MQ=255) tttCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGAt < 1:1913246/91‑1 (MQ=255) ttCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCGAACCATTACGGTTACTGGAATTGGCACATTCGAGATg < 1:3322824/91‑1 (MQ=255) ttCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATg < 1:1450626/91‑1 (MQ=255) tctcACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGt < 1:2276809/91‑1 (MQ=255) ctcACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGtt < 1:3803160/91‑1 (MQ=255) tcACAAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattcc < 2:2934012‑M2/91‑79 (MQ=255) tcACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTg < 2:1662988/91‑1 (MQ=255) acaTACGATTAAGAAAGTGGTTTTCATGTGCTTTACCTGCTTATCTGCAACCCCTTACGGTTACTGGAATTGGCACATTCGAGATGTTGcc < 2:2335299/91‑1 (MQ=255) acaAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattcccc < 1:1372222‑M2/91‑81 (MQ=255) acaAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattcccc < 1:1135313‑M2/91‑81 (MQ=255) acaAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattcccc < 1:1633998‑M2/91‑81 (MQ=255) acaAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattcccc < 1:3479399‑M2/91‑81 (MQ=255) acaAACGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattcccc < 1:515674‑M2/91‑81 (MQ=255) caAGCGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCg < 2:2308765/91‑1 (MQ=255) caAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCg < 2:3949349/91‑1 (MQ=255) caAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCg < 1:133061/91‑1 (MQ=255) aaaCGATGAagaaagaggtatttttaattggaaagcaggtaaaaaggatggaagtacataaaaagagcaatgcttgggcattattcccctt < 1:377558‑M2/91‑83 (MQ=255) aaaCGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGa > 2:2361554/1‑91 (MQ=255) gATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTTCTGGAATTGGCACATTCGAGATGTTGCCTAGGCt > 2:3206252/1‑91 (MQ=255) gATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCt > 1:2188703/1‑91 (MQ=255) gATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCt < 1:2570426/91‑1 (MQ=255) gaagaaAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCa < 1:2223255/91‑1 (MQ=255) gaagaaAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCa < 2:1595368/91‑1 (MQ=255) gaagaaAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCa < 2:1595159/91‑1 (MQ=255) gaagaaAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCa > 1:3899610/1‑91 (MQ=255) | GGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTCACAAACGATGAAGAAAGAGGTTTTCATGTGCTTTACCTGCTTATCTTCAAACCATTACGGTTACTGGAATTGGCACATTCGAGATGTTGCCGAGGCTTCA > USA300TCH1516_ALE/2444808‑2444986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |