| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 280894 | 206 (1.010) | 15 (0.090) +TTAATTGGGAGTA |
5/134 | NT | 8.8% | intergenic (‑146/+11) | USA300HOU_RS01225/USA300HOU_RS01230 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 855632 = | 165 (0.810) | intergenic (+163/‑597) | zipA_1/cggR | Cell division protein ZipA/Central glycolytic genes regulator | |||||
Only 100 of 222 total aligned reads displayed.
TATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTT > USA300TCH1516_ALE/855542‑855722 | tATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTgg < 2:2167634/91‑1 (MQ=255) ttttATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGAc < 1:3097768/91‑1 (MQ=255) ttttATAATTGTTAATTAGGGGAGAGATGATACTAAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGAc < 2:2779990/91‑1 (MQ=255) tttATAATTGTTAATTAGGGGAGAGATGATACTTTAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACa > 2:2840189/1‑91 (MQ=255) ttATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAg > 2:3081408/1‑91 (MQ=255) taATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGaaa > 1:2658973/1‑91 (MQ=255) taATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGaaa < 1:3835127/91‑1 (MQ=255) taATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGaaa > 1:801946/1‑91 (MQ=255) aaTTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAAt > 1:981410/1‑91 (MQ=255) aaTTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAAt > 1:876143/1‑91 (MQ=255) gTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGata > 1:1776395/1‑91 (MQ=255) tAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATAtt < 2:3169840/91‑1 (MQ=255) aaTTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATAttt < 1:2789379/91‑1 (MQ=255) aGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGc > 1:1013091/1‑91 (MQ=255) aGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGc > 1:2567256/1‑91 (MQ=255) gggAGAGATGATACTTAAATAGTCAGTTATTTATTTTACGGATAGTGAAAGATATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaa < 2:3674617/91‑1 (MQ=39) ggAGAGATGATACTTAACTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaaa > 2:606926/1‑91 (MQ=255) ggAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaaa < 1:947347/91‑1 (MQ=255) gagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatt < 2:392785/91‑1 (MQ=255) gagaTGAGTCTTAATGCGTTTGGTATTTATTTTACTGATAGTTGAATTGATTTTGAGTGAGGTGGGACAGAATTGAGATTTGCCCAAAata < 2:1243542/91‑2 (MQ=255) agaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAattt > 2:1446222/1‑91 (MQ=255) agaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAattt < 1:1929400/91‑1 (MQ=255) gatgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAattta > 1:3550815/1‑91 (MQ=255) atgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatttat > 1:3628490/1‑91 (MQ=255) gatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatttattt > 2:3347012/1‑91 (MQ=255) gatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatttattt > 1:3768740/1‑91 (MQ=255) atACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtc < 1:643139/91‑1 (MQ=255) atACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtc > 2:3361288/1‑91 (MQ=255) tACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcg < 1:899026/91‑1 (MQ=255) tACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcg > 2:2016228/1‑91 (MQ=255) aCTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgt < 2:1099732/91‑1 (MQ=255) aCTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTGATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgt > 2:2991363/1‑91 (MQ=255) ttAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgtcg > 2:1165411/1‑91 (MQ=255) ttAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgtcg > 2:195918/1‑91 (MQ=255) ttAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgtcg > 2:2293833/1‑91 (MQ=255) aaaTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCgtcgtc > 2:2005367/1‑91 (MQ=255) aaaTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAAATTATTTCgtcgtc > 1:3956833/1‑91 (MQ=255) tagttagtTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCa < 1:1574217/91‑1 (MQ=255) tagttagtTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCa > 2:1284183/1‑91 (MQ=255) agttagttATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAc < 1:2071778/91‑1 (MQ=255) agttagttATTTATTTTACGGATAGTGAAATATATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAc < 2:1567273/91‑1 (MQ=255) gttagttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAcc < 1:2847992/91‑1 (MQ=255) acagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCacca > 2:1014165‑M2/47‑90 (MQ=255) acagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCacca > 2:3302195‑M2/47‑90 (MQ=255) acagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCacca > 1:1734055‑M2/47‑90 (MQ=255) tagttaTTTATTTTACGGATAGTGAAATTTATTTTGTGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAcccc < 2:3902833/91‑1 (MQ=255) tagttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAcccc < 1:1209234/91‑1 (MQ=255) tagttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAcccc < 1:3445720/91‑1 (MQ=255) cagccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCcaccac > 1:2182743‑M2/46‑89 (MQ=255) agccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCccaccaca > 1:3699678‑M2/45‑88 (MQ=255) agccatgacaaagtaaagtcatagctgttttttaattgggagtaGGACAGAGATGATATTTTCGCAAAATTTATTTGGTCGTCCCACcaca > 1:797548‑M2/45‑91 (MQ=255) gttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCaa > 2:3234450/1‑91 (MQ=255) atttatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACtt < 2:671762/91‑1 (MQ=255) tttatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTc < 2:1847334/91‑1 (MQ=255) tttatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGAGACAGAAAGGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTc < 2:1846857/91‑1 (MQ=255) atttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCAt < 2:819523/91‑1 (MQ=255) ttttACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCAtt > 2:3392375/1‑91 (MQ=255) ttACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGc < 1:922742/91‑1 (MQ=255) aCGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCt < 2:1927929/91‑1 (MQ=255) gttAGTGAAATTTATTTTGTGTGAGGTTGGACAGAAGTGATATTTTCGCAAAATTTATTTCGTCGTCTCTCGCCAACTTCCATTGCCTGTa < 2:3845842/89‑1 (MQ=18) aTAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAg > 2:3102719/1‑91 (MQ=255) aTAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAg < 1:2007761/91‑1 (MQ=255) aGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGaa < 1:272914/91‑1 (MQ=255) aGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGaa < 1:2424509/91‑1 (MQ=255) gTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGaaa < 2:3502430/91‑1 (MQ=255) catttatttTGAGTGAGGTGGGACAGAACTGATATTTTCCCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCCGTAGACATCgg > 2:3622522/2‑91 (MQ=17) aaTTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTgg > 2:3388570/1‑91 (MQ=255) ttatttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGaaa > 1:496997/1‑91 (MQ=255) ttttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc > 2:2024837/1‑91 (MQ=255) ttttGAGTGAGGTGGGACAGAAATGATATGTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc < 2:459228/91‑1 (MQ=255) tttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCa > 1:568759/1‑91 (MQ=255) tntGAGTGANGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCa < 1:2250995/91‑1 (MQ=255) ttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCaa > 1:3448535/1‑91 (MQ=255) ttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCaa > 2:3872489/1‑91 (MQ=255) ttGAGCGAGGTGGGACAGAAATGATATTTGCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGATTTCCaa < 1:1074000/91‑1 (MQ=17) gagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATTCAAtt > 1:127036/1‑91 (MQ=255) gagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAAtt > 2:3584092/1‑91 (MQ=255) gagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAAtt > 2:2679312/1‑91 (MQ=255) gagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTG‑AGAAATTGGATTTCCAAttt < 1:2627562/91‑1 (MQ=17) agtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAAttt > 1:2450008/1‑91 (MQ=255) agtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAAttt > 1:2390276/1‑91 (MQ=255) gtgagGTGGGACAGATATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTACCATTGCCTGTAGAAATTGGAAATCCAATTtc > 1:3371543/1‑91 (MQ=255) gtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTtc < 1:3250233/91‑1 (MQ=255) gtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTtc < 1:1647162/91‑1 (MQ=255) gagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTtctc < 1:83139/91‑1 (MQ=255) agGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTctct > 1:1380111/1‑91 (MQ=255) ggTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTa < 2:2227480/91‑1 (MQ=255) ggTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTa < 1:3059365/91‑1 (MQ=255) ggTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTa < 1:3306863/91‑1 (MQ=255) ggTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTa > 1:2984786/1‑91 (MQ=255) ggTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTa > 1:3791207/1‑91 (MQ=255) gTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTAt < 2:2101694/91‑1 (MQ=255) tGGGAGAGAAATGATATTTTCGCAAGATTTATTTCGTCGACCCACCCCAACTTTCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 1:3676036/91‑1 (MQ=14) tGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 1:2036654/91‑1 (MQ=255) tGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 1:754719/91‑1 (MQ=255) tGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 2:2503871/91‑1 (MQ=255) tGGGACAGAAATGATATTTTCGCAAAATTTATTNCGTCGCCCCACNCCCACCTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg < 1:1773395/91‑1 (MQ=14) ggACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGtt < 2:1492074/91‑1 (MQ=255) ggACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATCTCTCTATgct > 2:2783152/1‑89 (MQ=255) ggACAGAAATGATATTTTCGCAAAATTTAGTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGtt < 1:3172029/91‑1 (MQ=255) | TATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTT > USA300TCH1516_ALE/855542‑855722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |