| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 954695 = | 166 (0.810) | 32 (0.170) +GGCAAG |
12/148 | NT | 15.5% | intergenic (+349/+154) | gluD/glpQ_1 | NAD‑specific glutamate dehydrogenase/Glycerophosphodiester phosphodiesterase |
| ? | USA300TCH1516_ALE | 1873938 = | 213 (1.050) | intergenic (‑614/+136) | USA300HOU_RS09300/USA300HOU_RS09305 | Putative dipeptidase/hypothetical protein | |||||
Only 100 of 271 total aligned reads displayed.
TCTTTCTATATGCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTGCTAAAAT > USA300TCH1516_ALE/1873848‑1874028 | tttctATATGCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGtt > 2:3364347/1‑91 (MQ=255) ttctATATGCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTg > 1:867722/1‑91 (MQ=255) ttctATATGCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTg < 2:1939870/91‑1 (MQ=255) ctATATGCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGAc < 1:2305756/91‑1 (MQ=255) ctATATGCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGGAGTTGAc > 2:3509712/1‑91 (MQ=255) tataTGCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACt > 2:2740317/1‑91 (MQ=255) tataTGCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACt > 2:2634416/1‑91 (MQ=255) tatGCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAAAGTCCTATAGTTTACAATATTATATTGGCAGTAGTAGACt‑ga > 2:1700491/1‑91 (MQ=255) tGCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACt‑gaa‑t > 1:2467113/1‑91 (MQ=255) gCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGact‑gac‑tg > 2:3630880/1‑91 (MQ=255) gCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACt‑gaa‑tg > 1:1744514/1‑91 (MQ=255) atatTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACt‑gaa‑tgaa < 2:1823569/91‑1 (MQ=255) atatTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACt‑gaa‑tgaa > 2:2613653/1‑91 (MQ=255) tatTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGaaa < 2:1562990/91‑1 (MQ=255) ttAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAAt > 1:1988175/1‑91 (MQ=255) gCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACg > 2:750710/1‑91 (MQ=255) gCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACg > 2:3264603/1‑91 (MQ=255) cTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGc > 2:2530953/1‑91 (MQ=255) tAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAAc < 2:1002153/91‑1 (MQ=255) aaCGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACa < 2:1068875/91‑1 (MQ=255) aaCGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACa < 2:1140805/91‑1 (MQ=255) aCGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACaa > 2:2873342/1‑91 (MQ=255) cGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAg > 1:1365454/1‑91 (MQ=255) gATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGc < 2:2286613/91‑1 (MQ=255) tAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCtt < 2:1738763/91‑1 (MQ=255) tAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCtt < 1:2824858/91‑1 (MQ=255) tAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCtt < 1:126111/91‑1 (MQ=255) aaaGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCttt < 1:481707/91‑1 (MQ=255) aaaGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCttt > 1:3129738/1‑91 (MQ=255) aaGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCtttt > 1:3850050/1‑91 (MQ=255) aGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCttttt > 2:2318100/1‑91 (MQ=255) gAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCGGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCtttttt > 2:2016628/1‑91 (MQ=255) ggacagaaatgatattttcgtaaaatttatttcgtcgtcccaccccggcaagGTTGACTAGAATTGAAAATTCGCTTGTAACAAGCttttt < 1:2890642‑M2/39‑1 (MQ=255) ggacagaaatgatattttcgcaaaatttatttcgtcgtcccaccccagcaagGTTGACTAGAATTGAAAATGCGCTTGTAACAAGCttttt < 1:3029679‑M2/39‑1 (MQ=255) ggacagaaatgatattttcgcaaaatttatttcgtcgtcccaccccagcaagGTTGACTAGAATTGAAAATGCGCTTGTAACAAGCttttt < 1:32666‑M2/39‑1 (MQ=255) aaCCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTc > 2:3413301/1‑91 (MQ=255) aaCCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTc < 1:950303/91‑1 (MQ=255) cagaaatcatattttagcaaaatttatttcgtcgtcccaccccggcaagGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAAt < 2:873426‑M2/42‑1 (MQ=255) cTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAAt < 1:53108/91‑1 (MQ=255) cTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAAt > 1:721859/1‑91 (MQ=255) tGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAAtt < 2:1377012/91‑1 (MQ=255) agaaatcatattttagcaaaagttatttcgtcgtcccgcaccggcaagGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAAtt < 2:3103120‑M2/43‑1 (MQ=255) taaaCACTAAGAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTc < 2:1468242/90‑1 (MQ=255) gaaatgatattttcgtaaaatttatttcgtcgtcccaccccggcaagGTTGACT‑GAA‑CGAAAATTCGCTTGTAACAAGCTTTTTTCAATTc < 2:2426049‑M2/44‑1 (MQ=255) gaaatgatattttcgtaaaatttatttcgtcgtcccaccccggcaagGTTGACT‑GAA‑CGAAAATTCGCTTGTAACAAGCTTTTTTCAATTc < 2:1195268‑M2/44‑1 (MQ=255) gaaatcatattttagcaaaatttatttcgtcgtcccaccccggcaagGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTc < 1:1649833‑M2/44‑1 (MQ=255) aaatgatattttcgcaaaatttatttcgtcgtcccaccccagcaagGTTGACT‑GAA‑CGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCt < 2:3811964‑M2/45‑1 (MQ=255) aaatcatattttagcaaaatttatttcgtcgtcccaccccggcaagGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCt < 2:1795323‑M2/45‑1 (MQ=255) aatcatattttagcaaaatttatttcgtcgtcccaccccggcaagGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTa < 1:2907750‑M2/46‑1 (MQ=255) aaCACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTa > 2:2237781/1‑91 (MQ=255) acacTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAg > 1:2062140/1‑91 (MQ=255) cacTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGt > 1:639565/1‑91 (MQ=255) atattttcgtaaaatttatttcgtcgtcccaccccggcaagGTTGACT‑GAA‑CGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCa < 1:3349994‑M2/50‑1 (MQ=255) tattttagcaaaatttatttcgtcgtcccaccccggcaagGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCaa < 2:2114434‑M2/51‑1 (MQ=255) taataaATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAG‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCaa < 1:3427566/91‑1 (MQ=255) taataaATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCaa > 2:3060272/1‑91 (MQ=255) ataaATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAAcc > 1:2838653/1‑91 (MQ=255) ataaATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAAcc > 1:1365079/1‑91 (MQ=255) taaATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCt > 1:682458/1‑91 (MQ=255) taaATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCt < 2:442734/91‑1 (MQ=255) aaaTGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCtt > 1:511046/1‑91 (MQ=255) aaaTGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCtt < 1:2600237/91‑1 (MQ=255) aaaTGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCtt < 2:3006885/91‑1 (MQ=255) tcgcaaaatttagttcgtcgtcccaccccagcaagGTTGACT‑GAA‑CGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCACCCTTg < 2:2739459‑M2/56‑1 (MQ=255) aaTGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTg > 1:2537393/1‑91 (MQ=255) aaTGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTg < 2:581177/91‑1 (MQ=255) tGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGcc < 2:347594/91‑1 (MQ=255) tCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCgg > 1:1980905/1‑91 (MQ=255) tCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCgg > 1:1502795/1‑91 (MQ=255) ccTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCggg > 1:1198326/1‑91 (MQ=255) ccTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCggg < 1:3620420/91‑1 (MQ=255) cTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCgggg < 1:2199967/91‑1 (MQ=255) cTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCgggg < 1:1860683/91‑1 (MQ=255) cTATAGATTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTGTTTTCAATTCTAGTCAACCTTGCCgggg < 2:2505450/91‑1 (MQ=255) ataGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTg > 2:2250086/1‑91 (MQ=255) taGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTgg < 1:1026821/91‑1 (MQ=255) taGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTgg < 1:2730380/91‑1 (MQ=255) aGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTggg > 1:996814/1‑91 (MQ=255) aGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTggg > 2:387764/1‑91 (MQ=255) aGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTggg > 2:1626471/1‑91 (MQ=255) ttACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATATGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGgacg < 1:1778862/91‑1 (MQ=255) aCAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGgacgac > 1:2617025/1‑91 (MQ=255) aCAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGgacgac < 2:1222781/91‑1 (MQ=255) aCAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGgacgac > 1:1676454/1‑91 (MQ=255) tattatattGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGaaa > 1:3835171/1‑91 (MQ=255) attatattGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGaaat < 2:630713/91‑1 (MQ=255) ttatattGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGaaata > 1:47055/1‑91 (MQ=255) ttatattGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGaaata > 1:407563/1‑91 (MQ=255) tatattGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGaaataa < 1:2027499/91‑1 (MQ=255) tattGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGaaataaat > 1:225057/1‑91 (MQ=255) attGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAAtt > 2:3115018/1‑91 (MQ=40) ttGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTTTTTTTTTTTCAACCTTGCCGGGGTGGGACGACGAATTAAAttt > 2:3519841/1‑91 (MQ=14) ttGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAAttt > 1:2668463/1‑91 (MQ=40) ttGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAAttt > 2:1314474/1‑91 (MQ=40) ggCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTg < 2:3748475/91‑1 (MQ=40) ggCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTg < 2:2818656/91‑1 (MQ=39) cAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTGCt > 2:3213057/1‑91 (MQ=255) agtagtTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTGCTa > 2:3391711/1‑91 (MQ=255) gtagtTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTGCTaa > 1:185284/1‑91 (MQ=255) gtTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTGCTAAAat > 2:3247404/1‑91 (MQ=255) | TCTTTCTATATGCATATTAGCTATGACTAACGATAAAGAACCTGAAACACTAATAAATGTCCTATAGTTTACAATATTATATTGGCAGTAGTTGACT‑GAA‑TGAAAATACGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTGCTAAAAT > USA300TCH1516_ALE/1873848‑1874028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |