New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	= 613910	66 (1.380)	4 (0.080)	4/296	5.0	5.7%	coding (2222/2844 nt)	sdrC	Serine‑aspartate repeat‑containing protein C
	?	USA300TCH1516_ALE	622287 =	68 (1.440)					coding (2850/3465 nt)	sdrE	Serine‑aspartate repeat‑containing protein E
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCGATGGTGGCGAAGTTGATGTAACAATTACGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCGACTCAGACTCAGATAGCG  >  USA300TCH1516_ALE/613760‑614059                                                                                                                                                       |                                                                                                                                                      ccGATGGTGGCGAAGTTGATGTAACAATTACGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACtcagatagcgactcagattcagatagcgactcaga                                                                                                                                                       <  1:457789/151‑1 (MQ=255) ccGATGGTGGCGAAGTTGATGTAACAATTACGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACtcagatagcgactcagattcagatagcgactcaga                                                                                                                                                       >  1:263128/1‑151 (MQ=255)    aTGGTGGCGAAGTTGATGTAACAATTACGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCagatagcgactcagattcagatagcgactcagattc                                                                                                                                                    >  1:343109/1‑151 (MQ=255)    aTGGTGGCGAAGTTGATGTAACAATTACGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCagatagcgactcagattcagatagcgactcagattc                                                                                                                                                    >  2:70070/1‑151 (MQ=255)     tggtggCGAAGTTGATGTAACAATTACGGATCATGATGATTTCGCACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAgatagcgactcagattcagatagcgactcagactca                                                                                                                                                   >  1:416346/1‑151 (MQ=255)        tggCGAAGTTGATGTAACAATTACGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACtcagactcagac                                                                                                                                                >  2:198114/1‑151 (MQ=255)                       aaCAATTACGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGAATCAgattcagacagcgattcagacagc                                                                                                                                 >  1:221417/1‑151 (MQ=255)                         cAATTACGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGAttcagacagcgattcagacagcga                                                                                                                               >  1:231766/1‑151 (MQ=255)                          aaTTACGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGACTCAGACAGCGACTCAGACACCgac                                                                                                                              >  2:371815/1‑151 (MQ=255)                            ttACGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCgactc                                                                                                                            <  2:202931/151‑1 (MQ=255)                              aCGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCgactcag                                                                                                                          >  1:181146/1‑151 (MQ=255)                              aCGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCgactcag                                                                                                                          >  2:189252/1‑151 (MQ=255)                              aCGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCgactcag                                                                                                                          >  2:385406/1‑151 (MQ=255)                                   tCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCgactcagactca                                                                                                                     <  1:84905/151‑1 (MQ=255)                                   tCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCgactcagactca                                                                                                                     <  1:221434/151‑1 (MQ=255)                                    cATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGactcagactcag                                                                                                                    <  1:249224/151‑1 (MQ=255)                                    cATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGactcagactcag                                                                                                                    <  1:347530/151‑1 (MQ=255)                                     atgatgATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGActcagactcaga                                                                                                                   <  2:111865/151‑1 (MQ=255)                                                         aaTGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACa                                                                                               >  2:108854/1‑151 (MQ=255)                                                         aaTGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACa                                                                                               >  1:124635/1‑151 (MQ=255)                                                         aaTGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACa                                                                                               >  2:434665/1‑151 (MQ=255)                                                         aaTGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGACTCAGACAGCGACTCAGACAGCGACTCAGACTCAGATAGCGACTCAGATTCAGACa                                                                                               >  2:276855/1‑151 (MQ=255)                                                          aTGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAg                                                                                              >  1:295188/1‑151 (MQ=255)                                                          aTGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAg                                                                                              >  1:284578/1‑151 (MQ=255)                                                           tGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGc                                                                                             <  2:380340/151‑1 (MQ=255)                                                           tGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGc                                                                                             <  1:145685/151‑1 (MQ=255)                                                           tGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGc                                                                                             <  2:150442/151‑1 (MQ=255)                                                                 ctacGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCgactca                                                                                       <  1:200879/151‑1 (MQ=255)                                                                 ctacGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACCCAGACTCAGATAGCGATTCAGATCCAGACACCgactcc                                                                                       >  2:40740/1‑150 (MQ=255)                                                                     gaagaagaaACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCgactcagact                                                                                   <  2:379504/151‑1 (MQ=255)                                                                           gaaGCATCAGATAGCGACTTAGATTCTGACAGCGATTCCGACTCAGATAGCGACTCAGATTCAGATAGCGTCTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACa                                                                             <  2:248101/151‑1 (MQ=255)                                                                           gaaACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACa                                                                             <  2:248091/151‑1 (MQ=255)                                                                             aaCATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGc                                                                           >  1:350890/1‑151 (MQ=255)                                                                             aaCATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGc                                                                           >  2:265266/1‑151 (MQ=255)                                                                                 tCAGATAGCGACGCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGAtt                                                                       <  2:221417/151‑1 (MQ=255)                                                                                  cAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTc                                                                      <  2:243799/151‑1 (MQ=255)                                                                                               aGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCgactcaga                                                                                     >  1:162239/1‑123 (MQ=255)                                                                                               aGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCgactcaga                                                                                     <  2:162239/123‑1 (MQ=255)                                                                                               aGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACACAGACTCAGACAGCGATGCAGACTCAGACAGCAACGCAGACGCAGACAGCGATGCAGACTCGGATAgg                                                         >  2:220588/1‑150 (MQ=21)                                                                                                     tGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTGAGACTCAGATAGCGATTGAGATTCAGACAGCGACTGAGACTCAGACAGAGATTCCGACTCGGATAGCgactca                                                   >  2:384795/1‑151 (MQ=255)                                                                                                     tGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCgactca                                                   <  2:74443/151‑1 (MQ=255)                                                                                                     tGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCgactca                                                   <  2:328332/151‑1 (MQ=255)                                                                                                     tGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCgactca                                                   >  1:426319/1‑151 (MQ=255)                                                                                                        cAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCgactcagac                                                >  1:91108/1‑151 (MQ=255)                                                                                                           aaaTTCAGACTAAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCgactcagactca                                             <  2:425356/149‑1 (MQ=255)                                                                                                            gATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGactcagactcag                                            <  1:70070/151‑1 (MQ=255)                                                                                                            gATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGactcagactcag                                            <  2:343109/151‑1 (MQ=255)                                                                                                             aTTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGActcagactcaga                                           <  2:308575/151‑1 (MQ=255)                                                                                                                cAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGACTCAGACAGCGAGTCAGACAGCGACCGAGACGCAGATAGCGATTCAGATTCAGACAGAGACGCAGACTCAGACAGCGAGTCAGAGTCGGATGGCGAatcagaatcagagcg                                        >  2:249465/1‑148 (MQ=18)                                                                                                                 aGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGc                                       <  1:189252/151‑1 (MQ=255)                                                                                                                    cTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGAc                                    <  2:382537/151‑1 (MQ=255)                                                                                                                       agatagcgactcagattcagatagcgactcagattcAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCGGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCa                                 <  1:175575/151‑1 (MQ=255)                                                                                                                       agatagcgactcagattcagatagcgactcagattcAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCa                                 <  2:72667/151‑1 (MQ=255)                                                                                                                       agatagcgactcagattcagatagcgactcagattcAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCa                                 >  1:142198/1‑151 (MQ=255)                                                                                                                       agatagcgactcagattcagatagcgactcagattcAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCa                                 <  2:412057/151‑1 (MQ=255)                                                                                                                       agatagcgactcagattcagatagcgactcagattcAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCa                                 <  2:440970/151‑1 (MQ=255)                                                                                                                       agatagcgactcagaatcagacagcaactcagattcAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTcn                                 <  2:373243/151‑2 (MQ=255)                                                                                                                          tagcgactcagattcagatagcgactcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGAt                              >  1:426932/1‑151 (MQ=255)                                                                                                                          tagcgactcagattcagatagcgactcagattcagaCAGCGATTCAGACAGCGACACAGACTCAGACAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCGGAAAGCGACTCAGATTCAGAAAGAGACTCAGac                              >  2:220498/1‑150 (MQ=18)                                                                                                                                ctcagattcagatagcgactcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGaa                        >  2:56923/1‑150 (MQ=255)                                                                                                                                         agatagcgactcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGACTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCgactca               >  2:222785/1‑151 (MQ=255)                                                                                                                                         agatagcgactcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGAGATTCAGATTCAGACAGCGACTCAGAATCAGACAGAGATTGGGACTCGGATAGCGACTCAGACTCAGATAGCGACTCGGACTCGGATAgagcatga               >  2:390297/1‑144 (MQ=17)                                                                                                                                           atagcgactcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCgactcaga             <  2:333438/151‑1 (MQ=255)                                                                                                                                             agcgactcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCgactcagact           >  1:407914/1‑151 (MQ=255)                                                                                                                                             agcgactcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCgactcagacc           >  1:429250/1‑150 (MQ=255)                                                                                                                                                  ctcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCGACTCAGACTCAGAt      <  2:116621/151‑1 (MQ=255)                                                                                                                                                  ctcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCGACTCAGACTCAGAt      <  2:446952/151‑1 (MQ=255)                                                                                                                                                  ctcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCGACTCAGACTCAGAt      <  1:162238/151‑1 (MQ=255)                                                                                                                                                  ctcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCGACTCAGACTCAGAt      <  2:96926/151‑1 (MQ=255)                                                                                                                                                  ctcagattcagaCAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACGCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCGACTCAGACTCAGAt      <  1:207301/151‑1 (MQ=255)                                                                                                                                                      gattcagacagcgattcagacagcGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCGACTCAGACTCAGATAGCg  >  1:269143/1‑151 (MQ=255)                                                                                                                                                       |                                                                                                                                                      CCGATGGTGGCGAAGTTGATGTAACAATTACGGATCATGATGATTTCACACTTGATAATGGCTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCTGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCGGATAGCGACTCAGACTCAGATAGCGACTCAGATTCGGATAGCGACTCAGACTCAGATAGCG  >  USA300TCH1516_ALE/613760‑614059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.