| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | = 1983 | 2631 (0.220) | 172 (0.010) | 26/154 | NT | 6.3% | intergenic (+216/+110) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein |
| ? | NC_012417 | = 1995 | 2596 (0.230) | intergenic (+228/+98) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
Only 100 of 732 total aligned reads displayed.
ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012417/1893‑1983‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < NC_012417/1995‑1906 ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTGACTAAACTTGC > 2:2959369/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 1:109898/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 1:678100/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 2:1491350/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 2:2370538/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC < 1:3299893/91‑1ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 2:2479406/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 2:251916/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 1:2767341/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 1:2734193/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 1:2679717/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 1:2445876/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC < 2:598081/91‑1ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 1:1473112/1‑91ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC > 2:3363638/1‑91 ATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑A < 1:1539503/91‑1 TATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATT < 1:1967608/91‑1 TATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATT < 1:1026852/91‑1 TATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATT < 1:365897/91‑1 TATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATT < 1:316050/91‑1 TATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATT < 1:14477/91‑1 TATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATT < 1:1893931/91‑1 TATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATT < 2:3240090/91‑1 ATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATTC < 1:3200445/91‑1 TCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATTCG < 2:1460155/91‑1 ATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATTCGTC < 1:1782527/91‑1 ATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATTCGTC < 1:3727728/91‑1 ATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATTCGTC < 1:2185055/91‑1 TGAAGATAATAAAAAATAGACGACTCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATTCGTCT < 2:3617540/91‑1 GAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAATTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATTCGTCTG < 1:2359889/91‑1 GAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATTCGTCTG < 1:2952312/91‑1 GAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATTCGTCTG < 1:3499035/91‑1 GAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATTCGTCTG < 1:2114628/91‑1 TAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCCGAC‑ATTCGTCTGCAAGT < 2:1561647/91‑1 AGAACCCTTAACTAAACTTGCAGACGAAT‑GTCGGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTC > 1:786517/1‑91 TAACTAAACTTGCAGACGAAT‑GTCGGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTT > 1:2903151/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGTGTCGTCTATTTTTTATTATCT > 2:665750/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT < 2:2275188/91‑1 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 2:2196021/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 2:3201315/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 2:2025146/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT < 2:3278487/91‑1 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 2:2631506/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT < 2:1787644/91‑1 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 2:1665436/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 2:3117075/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT < 2:3542273/91‑1 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT < 2:8675/91‑1 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 2:2732790/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT < 2:2866978/91‑1 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT < 2:1362984/91‑1 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 2:1282726/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 1:1660555/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 1:916506/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT < 1:2022970/91‑1 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 1:752809/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 1:2141850/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT < 1:2285336/91‑1 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 1:235081/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT < 1:2386941/91‑1 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 1:2599617/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 1:2794024/1‑91 TGCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTACTTGTCAACATCAATAAATTTTCTCTGAATAAATGCGTCGTCTATTTTTTATTATCT > 1:3103778/1‑91 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT > 1:3355761/1‑91 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT < 2:2342087/91‑1 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT > 2:2573615/1‑91 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT < 1:2501004/91‑1 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT > 2:309167/1‑91 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT > 1:1731847/1‑91 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT > 1:951503/1‑91 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT < 1:3457978/91‑1 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT > 2:1722169/1‑91 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT > 2:3860354/1‑91 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT > 2:1873572/1‑91 GCCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTT > 1:3425685/1‑91 CCGTC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTGTTTATTATCTTC < 1:3001781/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATCAATTTTCTCGGCATAAATGCGTCGTCTATGTTTTATTATCTTC > 1:3880300/1‑91 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 2:444543/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC > 2:3676092/1‑91 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 2:3814486/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC > 2:51457/1‑91 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC > 1:1355855/1‑91 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 1:1266491/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 2:74588/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 2:816527/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 2:3637114/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 1:1167934/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 2:1004752/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC > 2:3431311/1‑91 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 1:1813287/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 2:2084768/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 1:3579409/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 2:1849650/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 1:422337/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC > 2:1652422/1‑91 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 1:53871/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 1:612692/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < 1:842600/91‑1 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC > 2:1146111/1‑91 CCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTC > 2:2686567/1‑74 ATATGATTATCATGAAGATAATAAAAAATAGACGACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012417/1893‑1983‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCGAC‑ATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC < NC_012417/1995‑1906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |