| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 77142 | 208 (1.090) | 12 (0.070) | 10/140 | NT | 5.9% | coding (67/816 nt) | USA300HOU_RS00350 | Monoacylglycerol lipase |
| ? | USA300TCH1516_ALE | = 77155 | 203 (1.220) | coding (80/816 nt) | USA300HOU_RS00350 | Monoacylglycerol lipase | |||||
Only 100 of 300 total aligned reads displayed.
ATCAAGCTGATTGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGG > USA300TCH1516_ALE/77052‑77232 | aTCAAGCTGATTGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTC > 2:1151100‑M1/1‑91 (MQ=255) tCAAGCTGATTGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCa > 1:3174859/1‑91 (MQ=255) cAAGCTGATTGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCaa < 1:996200/91‑1 (MQ=255) aaGCTGATTGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAGACTTTATATGAAAGTGAATGATATTCAAg > 2:3822814/1‑91 (MQ=255) aaGCTGATTGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAg < 2:2521172/91‑1 (MQ=255) gCTGATTGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGAt > 1:2325301/1‑91 (MQ=255) tGATTGGAGAGGTTAAAATGCATTATATAAAATTTACTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGc < 2:3508371/91‑1 (MQ=255) aTTGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCgcttttgca < 1:1384065‑M1/91‑10 (MQ=255) aTTGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCa > 1:1022870/1‑90 (MQ=255) ttGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCaaa < 2:50178/91‑1 (MQ=255) ttGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCaaa > 2:2888563/1‑91 (MQ=255) ttGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCaaa < 2:1737854/91‑1 (MQ=255) tGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCaaaa > 1:3136493/1‑91 (MQ=255) ggAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAg > 2:1256626/1‑91 (MQ=255) gagaGGTTAAAATGCATTATATAAAATTTCTTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGc > 2:2275315/1‑91 (MQ=255) agagGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATCTGAAAGTGAATGATATTCAAGATGCAAAAGCg < 2:3537899‑M2/91‑2 (MQ=255) agagGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCg > 1:3795329‑M2/1‑90 (MQ=255) ggTTAAAGTGCATTATATAAAATTTATTGAGTCAAAAGATATTACAAAACTTTATATGAAAGTGAATGATATTCgcttttgcatcttgaat < 2:147334‑M1/91‑18 (MQ=255) aaaaTGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCgaatatca > 2:620823‑M2/1‑83 (MQ=255) aaaTGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCgaatatcat < 2:2039191‑M2/91‑10 (MQ=255) aaaTGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCgaatatcat < 1:2752345‑M2/91‑10 (MQ=255) aaTGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCgcttttgcatcttgaatatcatt < 2:2738159‑M1/91‑24 (MQ=255) aTGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATta < 2:131800/91‑1 (MQ=255) gCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATtata < 2:1531110/91‑1 (MQ=255) gCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATtata > 1:1239791/1‑91 (MQ=255) cATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAg > 1:3607180/1‑91 (MQ=255) aTTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGc > 1:1139369/1‑91 (MQ=255) ttATATAATATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCt < 2:3369666/91‑1 (MQ=255) ttATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCt > 2:906255/1‑91 (MQ=255) atataAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCa < 2:1709632/91‑1 (MQ=255) ataAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATg < 1:3150679/91‑1 (MQ=255) aaaaTTTATTGAGTCAAAAGATAATATAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgt > 2:2221083/1‑91 (MQ=255) aaaaTTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgt > 1:192117/1‑91 (MQ=255) aaaTTTATTGAGTCAAGAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgtg < 2:3703667/91‑1 (MQ=255) aaaTTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgtg > 2:1340900/1‑91 (MQ=255) aaaTTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTCAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgtg < 1:3076219/91‑1 (MQ=255) aaTTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgtgt > 1:2674980/1‑91 (MQ=255) tttATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTgg > 1:2149031/1‑91 (MQ=255) ttATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCgcttttgcatcttgaatatcattcactttcatataaagtt < 2:492698‑M1/91‑41 (MQ=255) ttATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCgctgttgcatcttgaatatcattcactttcatataaagtt < 2:495222‑M1/91‑41 (MQ=255) ttATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGc < 2:3864344/91‑1 (MQ=255) ttATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGc < 1:1203055/91‑1 (MQ=255) ttATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGc < 1:2542505/91‑1 (MQ=255) tATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCa > 2:2863067/1‑91 (MQ=255) aTTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAg < 2:933119/91‑1 (MQ=255) aTTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAg > 2:2161671/1‑91 (MQ=255) ttGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGa < 2:2480474/91‑1 (MQ=255) ttGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGa > 1:283773/1‑91 (MQ=255) gAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAAc > 1:3223945/1‑91 (MQ=255) gAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAAc > 1:74807/1‑91 (MQ=255) aGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACa > 2:2033779/1‑91 (MQ=255) gTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACAt > 2:206191/1‑91 (MQ=255) gTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACAt < 2:855226/91‑1 (MQ=255) tCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACAtt < 1:3465999/91‑1 (MQ=255) aaaGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAg < 2:10581/91‑1 (MQ=255) aaGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGa < 1:855317/91‑1 (MQ=255) aaGATAATACAAAACTTTATACGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGa > 1:2094413/1‑91 (MQ=255) ataataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAATATTTAGATCg < 2:1968638/91‑1 (MQ=255) ataataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAATATTTAGATCg < 2:2564954/91‑1 (MQ=255) ataataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCg > 1:276686/1‑91 (MQ=255) ataataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCg < 2:3178128/91‑1 (MQ=255) ataataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCg < 2:3111601/91‑1 (MQ=255) taataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGt < 1:371758/91‑1 (MQ=255) aataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGtt < 1:1858417/91‑1 (MQ=255) ataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTa < 2:1412388/91‑1 (MQ=255) ataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTa > 1:3255167/1‑91 (MQ=255) ataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTa > 2:2775155/1‑91 (MQ=255) cAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTatga > 1:637808/1‑91 (MQ=255) aaaaCTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTatgat < 2:3262940/91‑1 (MQ=255) aaCTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTAtgatga > 1:1492865/1‑91 (MQ=255) aaCTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTAtgatga < 1:2888563/91‑1 (MQ=255) aaCTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTAtgatga < 1:342975/91‑1 (MQ=255) cTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATgaga < 1:2727640/91‑1 (MQ=255) tttATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGAt > 1:2237526/1‑91 (MQ=255) ttATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATa < 2:3558618/91‑1 (MQ=255) tataTGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATaa > 1:1154774/1‑91 (MQ=255) tatGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACa > 2:595565/1‑91 (MQ=255) atGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAg > 1:2008922/1‑91 (MQ=255) tGAATGATATTCAAGATGCAAAAGTGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATAttt > 2:3151962/1‑91 (MQ=255) gAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTa > 1:2367195/1‑91 (MQ=255) aaTGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTaa < 1:1672003/91‑1 (MQ=255) aaTGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTaa < 2:1627253/91‑1 (MQ=255) aTGATATTCgcttttgcatcttgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcattt < 2:688058‑M1/91‑83 (MQ=255) aTGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTaaa > 2:2990052/1‑91 (MQ=255) aTGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTaaa > 2:1840770/1‑91 (MQ=255) tGATATTCAAGATGCAAAAGCgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcatttt < 1:1680877‑M2/91‑71 (MQ=255) tGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAAt < 2:950154/91‑1 (MQ=255) tGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAAt > 1:2665093/1‑91 (MQ=255) gATATTCgcttttgcatcttgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcatttta > 1:1804983‑M1/1‑7 (MQ=255) gATATTCgcttttgcatcttgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcatttta > 1:425433‑M1/1‑7 (MQ=255) gATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATg < 1:1333296/91‑1 (MQ=255) atatTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGa > 2:3796348/1‑91 (MQ=255) atTCgcttttgcatcttgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcattttaacc < 2:2221884‑M1/91‑88 (MQ=255) atTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAg < 2:563276/91‑1 (MQ=255) atTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAg < 1:58727/91‑1 (MQ=255) ttCgcttttgcatcttgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcattttaacct > 2:3300547‑M1/1‑3 (MQ=255) cgcttttgcatcttgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcattttaacctct > 1:3794369‑M1/1‑1 (MQ=255) cgcttttgcatcttgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcattttaacctct > 2:329610‑M1/1‑1 (MQ=255) cgcttttgcatcttgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcattttaacctct < 1:1631919‑M1/91‑91 (MQ=255) cAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCgg > 1:3406736/1‑91 (MQ=255) | ATCAAGCTGATTGGAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGG > USA300TCH1516_ALE/77052‑77232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |