BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	= 77142	208 (1.090)	12 (0.070)	10/140	NT	5.9%	coding (67/816 nt)	USA300HOU_RS00350	Monoacylglycerol lipase
*	?	USA300TCH1516_ALE	= 77155	203 (1.220)	12 (0.070)	10/140	NT	5.9%	coding (80/816 nt)	USA300HOU_RS00350	Monoacylglycerol lipase

Only 100 of 266 total aligned reads displayed.

GAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTAGTGTTAT  >  USA300TCH1516_ALE/77065‑77245

 agagGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCg                                                                                           >  2:3174859‑M2/1‑90 (MQ=255)

   agGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCgaa                                                                                         >  2:3300547‑M2/1‑88 (MQ=255)

           aTGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATta                                                                                 <  2:131800/91‑1 (MQ=255)

             gCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATtata                                                                               <  2:1531110/91‑1 (MQ=255)

              cATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAg                                                                              >  2:1894666/1‑91 (MQ=255)

               aTTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGc                                                                             >  1:1139369/1‑91 (MQ=255)

               aTTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGc                                                                             >  1:3444321/1‑91 (MQ=255)

                ttATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCt                                                                            >  2:906255/1‑91 (MQ=255)

                ttATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCt                                                                            >  1:559892/1‑91 (MQ=255)

                  atataAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCa                                                                          <  2:3269538/91‑1 (MQ=255)

                      aaaaTTTATTGAGTCAAAAGATAATATAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgt                                                                      >  2:2221083/1‑91 (MQ=255)

                       aaaTTTATTGAGTCAAGAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgtg                                                                     <  2:3703667/91‑1 (MQ=255)

                       aaaTTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgtg                                                                     >  1:198405/1‑91 (MQ=255)

                       aaaTTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgtg                                                                     >  2:1340900/1‑91 (MQ=255)

                       aaaTTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATAgtg                                                                     >  1:3486134/1‑91 (MQ=255)

                       aaaTTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTCAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgtg                                                                     <  1:3076219/91‑1 (MQ=255)

                       aaaTTTAGTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgtg                                                                     <  1:2024969/91‑1 (MQ=255)

                        aaTTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgtgt                                                                    >  1:2674980/1‑91 (MQ=255)

                        aaTTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGgtgt                                                                    >  1:2674893/1‑91 (MQ=255)

                          tttATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTgg                                                                  >  1:2149991/1‑91 (MQ=255)

                           ttATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGc                                                                 <  2:494337/91‑1 (MQ=255)

                            tATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCa                                                                <  2:1463436/91‑1 (MQ=255)

                            tATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCa                                                                >  2:6432/1‑91 (MQ=255)

                             aTTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAg                                                               <  2:945062/91‑1 (MQ=255)

                              ttGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGa                                                              >  2:2075134/1‑91 (MQ=255)

                              ttGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGa                                                              >  1:283773/1‑91 (MQ=255)

                              ttGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGa                                                              >  1:2547919/1‑91 (MQ=255)

                              ttGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGa                                                              >  1:2143272/1‑91 (MQ=255)

                              ttGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGa                                                              >  1:1366982/1‑91 (MQ=255)

                                gAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAAc                                                            >  2:914432/1‑91 (MQ=255)

                                 aGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACa                                                           >  2:2034968/1‑91 (MQ=255)

                                 aGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACa                                                           >  2:2497030/1‑91 (MQ=255)

                                 aGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACa                                                           >  2:3825546/1‑91 (MQ=255)

                                 aGTCAAAAGATAATACAAAACTGTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGGATATCATTATAGCTCATGGTGTGGCAGAACa                                                           <  2:2952208/91‑1 (MQ=255)

                                  gTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACAt                                                          >  1:1203591/1‑91 (MQ=255)

                                  gTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACAt                                                          <  2:855226/91‑1 (MQ=255)

                                  gTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACAt                                                          <  2:606448/91‑1 (MQ=255)

                                    cAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACAttt                                                        <  2:3252080/91‑1 (MQ=255)

                                      aaaGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAg                                                      <  2:2772130/91‑1 (MQ=255)

                                      aaaGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAg                                                      <  2:10581/91‑1 (MQ=255)

                                       aaGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGa                                                     <  1:855317/91‑1 (MQ=255)

                                       aaGATAATACAAAACTTTATACGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGa                                                     >  1:1769705/1‑91 (MQ=255)

                                          ataataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCg                                                  >  1:276686/1‑91 (MQ=255)

                                          ataataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCg                                                  <  2:3074032/91‑1 (MQ=255)

                                            aataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGtt                                                <  1:2734311/91‑1 (MQ=255)

                                            aataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGtt                                                <  1:1858417/91‑1 (MQ=255)

                                            aataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGtt                                                >  1:1300308/1‑91 (MQ=255)

                                             ataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTa                                               <  1:3774599/91‑1 (MQ=255)

                                             ataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTa                                               <  1:2473103/91‑1 (MQ=255)

                                             ataCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTa                                               <  2:1412388/91‑1 (MQ=255)

                                              taCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTat                                              >  2:259985/1‑91 (MQ=255)

                                               aCAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTatg                                             >  2:2253477/1‑91 (MQ=255)

                                                cAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTatga                                            >  1:1193869/1‑91 (MQ=255)

                                                   aaCTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTAtgatga                                         <  1:342975/91‑1 (MQ=255)

                                                   aaCTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTAtgatga                                         <  2:690632/91‑1 (MQ=255)

                                                   aaCTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTAtgatga                                         <  1:2888563/91‑1 (MQ=255)

                                                   aaCTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTAtgatga                                         >  2:567890/1‑91 (MQ=255)

                                                    aCTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATgag                                        >  1:622800/1‑91 (MQ=255)

                                                      tttATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGAt                                      >  1:2237526/1‑91 (MQ=255)

                                                       ttATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATa                                     >  2:3547851/1‑91 (MQ=255)

                                                        tataTGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATaa                                    >  1:1154774/1‑91 (MQ=255)

                                                        tataTGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATaa                                    >  2:2404973/1‑91 (MQ=255)

                                                            tGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGc                                <  2:198405/91‑1 (MQ=255)

                                                               aaGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCata                             >  1:1486253/1‑91 (MQ=255)

                                                                aGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCatat                            <  1:1596287/91‑1 (MQ=255)

                                                                  tGAATGATATTCAAGATGCAAAAGTGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATAttt                          >  2:3151962/1‑91 (MQ=255)

                                                                  tGAATGATATTCAAGATGCAAAAACGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATAttt                          >  2:3510783/1‑91 (MQ=255)

                                                                   gAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTa                         >  1:2366938/1‑91 (MQ=255)

                                                                    aaTGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTaa                        <  1:1672003/91‑1 (MQ=255)

                                                                    aaTGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTaa                        <  2:1627253/91‑1 (MQ=255)

                                                                     aTGATATTCAAGATGCAAAAGCgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcattt                       <  1:3230639‑M2/91‑70 (MQ=255)

                                                                       gATATTCAAGATGCAAAAGCgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcatttta                     <  2:543249‑M2/91‑72 (MQ=255)

                                                                       gATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATg                     >  2:1685024/1‑91 (MQ=255)

                                                                        atatTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGa                    >  2:3796348/1‑91 (MQ=255)

                                                                        atatTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGa                    <  1:1898673/91‑1 (MQ=255)

                                                                        atatTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGa                    <  1:1060728/91‑1 (MQ=255)

                                                                          atTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAg                  <  2:45244/91‑1 (MQ=255)

                                                                          atTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAg                  >  2:2048867/1‑91 (MQ=255)

                                                                           ttCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGc                 >  1:309828/1‑91 (MQ=255)

                                                                           ttCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGc                 >  1:3833192/1‑91 (MQ=255)

                                                                             cAAGATGCAAAAGCgaatatcattcactttcatataaagttttgtattatcttttgactcaataaattttatataatgcattttaacctct               <  1:818106‑M2/91‑78 (MQ=255)

                                                                             cAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCgg               >  1:3406736/1‑91 (MQ=255)

                                                                             cAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCgg               <  2:2863877/91‑1 (MQ=255)

                                                                             cAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCgg               <  2:2172414/91‑1 (MQ=255)

                                                                              aaGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCggg              <  1:2125837/91‑1 (MQ=255)

                                                                               aGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGt             <  1:688058/91‑1 (MQ=255)

                                                                               aGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGt             <  2:1824941/91‑1 (MQ=255)

                                                                                gATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGACCATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGtt            >  1:3363538/1‑91 (MQ=255)

                                                                                  tGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGtttt          <  1:3633599/91‑1 (MQ=255)

                                                                                   gCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTa         <  2:1230161/91‑1 (MQ=255)

                                                                                   gCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTa         <  2:2928735/91‑1 (MQ=255)

                                                                                    cAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTAg        >  2:1148958/1‑91 (MQ=255)

                                                                                     aaaaGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTAgt       >  1:3205933/1‑91 (MQ=255)

                                                                                      aaaGCAAATATCATTATAGCTCATGGTGTGGCAGAACTTTTAGATGGTTATGTTGAGTTAACAGAATATTTAAATGAAGCGGTTTTTAgtg      <  2:2805089/91‑1 (MQ=255)

                                                                                       aaGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTAgtgt     <  1:906255/91‑1 (MQ=255)

                                                                                       aaGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTAgtgt     >  2:398583/1‑91 (MQ=255)

                                                                                        aGCGAGTATCATTATAGCTCATTGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTAGTGtt    <  2:3136493/91‑1 (MQ=255)

                                                                                        aGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTAGTGtt    >  2:1724299/1‑91 (MQ=255)

                                                                                         gCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTAGTGtta   <  1:2429924/91‑1 (MQ=255)

                                                                                          cGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTAGTGttat  <  2:3487808/91‑1 (MQ=255)

GAGAGGTTAAAATGCATTATATAAAATTTATTGAGTCAAAAGATAATACAAAACTTTATATGAAAGTGAATGATATTCAAGATGCAAAAGCGAATATCATTATAGCTCATGGTGTGGCAGAACATTTAGATCGTTATGATGAGATAACAGCATATTTAAATGAAGCGGGTTTTAGTGTTAT  >  USA300TCH1516_ALE/77065‑77245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.