| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 141111 = | 158 (0.830) | 22 (0.130) | 9/146 | NT | 14.5% | coding (36/1779 nt) | iucC_2 | Aerobactin synthase |
| ? | USA300TCH1516_ALE | 141138 = | 116 (0.670) | coding (63/1779 nt) | iucC_2 | Aerobactin synthase | |||||
Only 100 of 225 total aligned reads displayed.
CCTATTTATACACATATACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCATTTTACAATA > USA300TCH1516_ALE/141021‑141201 | ccTATTTATACACATATACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTaga < 2:1620448/91‑1 (MQ=255)aaacgatactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacgacaatattctcataaataa < 2:3681222‑M1/1‑1 (MQ=255) aacgatactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAg > 1:1030916‑M1/90‑91 (MQ=255) aacgatactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAg > 1:2774594‑M1/90‑91 (MQ=255) aacgatactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAg < 1:2604653‑M1/2‑1 (MQ=255) acgatactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGt < 2:2993813‑M1/3‑1 (MQ=255) acgatactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGt < 1:2516684‑M1/3‑1 (MQ=255) acgatactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGt < 1:2262035‑M1/3‑1 (MQ=255) acgatactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGt < 2:580949‑M1/3‑1 (MQ=255) cgatactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTg < 2:1690680‑M1/4‑1 (MQ=255) aTTTATACACATATACCAAATCCAGTTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTg < 2:3599885/91‑1 (MQ=255) aTTTATACACATATACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTg > 2:1313006/1‑91 (MQ=255) tttATACACATATACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGa < 2:2312227/91‑1 (MQ=255) gatactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTGa > 1:775714‑M1/87‑91 (MQ=255) gatactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTGa < 1:800530‑M1/5‑1 (MQ=255) tactctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTGATg < 1:1424484‑M1/7‑1 (MQ=255) actctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTGATG‑c < 2:1948471‑M1/8‑1 (MQ=255) actctgaatcatgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTGATG‑c < 2:17417‑M1/8‑1 (MQ=255) acacATATACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑Ac > 1:115607/1‑91 (MQ=255) cacaTATACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑Acc < 1:1451629/91‑1 (MQ=255) cacaTATACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑Acc < 2:686545/91‑1 (MQ=255) cacaTATACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑Acc < 1:2444140/91‑1 (MQ=255) acaTATACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCa < 1:1801403/91‑1 (MQ=255) acaTATACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCa < 1:2899513/91‑1 (MQ=255) atatACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAAc > 1:3252846/1‑91 (MQ=255) atatACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAAc < 2:752273/91‑1 (MQ=255) taCCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTgg > 1:2697956/1‑91 (MQ=255) taCCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTgg < 1:1064801/91‑1 (MQ=255) atgtccttctattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTGATG‑C‑ACCAACTGGt > 1:1948471‑M1/74‑91 (MQ=255) aCCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGt > 2:1999705/1‑91 (MQ=255) aCCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCATGTAAAGACTAGAGTGATG‑C‑ACCAACTGGt > 2:2240054/1‑91 (MQ=255) cAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTat > 1:3351836/1‑91 (MQ=255) aaaTCTAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTatc < 2:3138365/91‑1 (MQ=255) aaaTCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTatc < 2:459278/91‑1 (MQ=255) aaaTCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTatc > 1:270943/1‑91 (MQ=255) aaaTCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGATatc > 1:2024045/1‑91 (MQ=255) aTCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTatcat < 2:2524576/91‑1 (MQ=255) tctagtgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcatgaattAGTGATG‑C‑ACCAACTGGTAtcatca > 2:860924‑M1/67‑91 (MQ=255) ccAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTAtcatca > 1:3360871/1‑91 (MQ=255) tattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTGATG‑C‑ACCAACTGGTATCATCACt > 1:1489994‑M1/65‑91 (MQ=255) tattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTGATG‑C‑ACCAACTGGTATCATCACt > 2:830768‑M1/65‑91 (MQ=255) tattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTGATG‑C‑ACCAACTGGTATCATCACt > 1:129485‑M1/65‑91 (MQ=255) tattgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTGATG‑C‑ACCAACTGGTATCATCACt > 2:3534151‑M1/65‑91 (MQ=255) attgtaaaatgaccgacaccgtcttgatatgacgctttatacacaacaatattctcatgaataAGTGATG‑C‑ACCAACTGGTATCATCACtt > 1:3579945‑M1/64‑91 (MQ=255) aTTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACtt > 1:3689980/1‑91 (MQ=255) aTTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACtt > 1:604313/1‑91 (MQ=255) tttGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACtta > 1:3660598/1‑91 (MQ=255) tttGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACtta < 1:3727159/91‑1 (MQ=255) ttGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACttat > 2:962338/1‑91 (MQ=255) gtaaaatgacctacaccgtcttgatatgacgctttatacacaacaatattctcataaataAGTGATG‑C‑ACCAACTGGTATCATCACttatt > 1:3521947‑M1/61‑91 (MQ=255) aTAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATg < 2:3018883/91‑1 (MQ=255) aaCAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATgag > 1:3042248/1‑91 (MQ=255) aaCAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATgag > 1:1690680/1‑91 (MQ=255) aaCAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATgag < 2:1449173/91‑1 (MQ=255) aCAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATgaga < 1:1249826/91‑1 (MQ=255) cAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGaa < 2:2086328/91‑1 (MQ=255) cAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGaa < 2:2633194/91‑1 (MQ=255) aaGGTGGTATCGAAATGTGAATCAAACAATTCTTCATCGTGTAAAGACTAGAGTGATG‑C‑AGCCACTGATATCATCACCTATTCATGAGaag > 2:280133/1‑90 (MQ=255) aaGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAat < 1:1612285/91‑1 (MQ=255) ggagtTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAatat < 1:3231832/91‑1 (MQ=255) ggaggTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAatat > 2:1887322/1‑91 (MQ=255) ggaggTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAatat > 2:1043267/1‑91 (MQ=255) aggTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATgaga < 1:3678015/85‑1 (MQ=255) ggTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATAttgt < 2:705842/91‑1 (MQ=255) tATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATAttgttg < 2:2447127/91‑1 (MQ=255) gTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGta < 2:3386242/91‑1 (MQ=255) gTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGta < 2:922787/91‑1 (MQ=255) aTTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGtata < 2:3351836/91‑1 (MQ=255) aTTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGtata < 2:1336889/91‑1 (MQ=255) aTTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGtata < 1:1745634/91‑1 (MQ=255) ttGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAata < 1:1552272/78‑1 (MQ=255) ttGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAata > 2:1552272/1‑78 (MQ=255) ttGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATaa < 1:298898/91‑1 (MQ=255) gtgAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAg < 2:3873351/91‑1 (MQ=255) cAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCat < 2:2387636/91‑1 (MQ=255) cAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCat > 2:2513969/1‑91 (MQ=255) aaaCAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCata > 2:1251571/1‑91 (MQ=255) aCAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATc > 2:297058/1‑91 (MQ=255) aCAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATc < 1:3485525/91‑1 (MQ=255) cAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCa > 2:2749686/1‑91 (MQ=255) cAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCa > 2:195551/1‑91 (MQ=255) aTTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAg < 1:2499762/91‑1 (MQ=255) ttCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGa < 1:128778/91‑1 (MQ=255) tCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGAc > 2:2584270/1‑91 (MQ=255) aaTCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGgtg < 1:1896810/91‑1 (MQ=255) aTCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGgtgt > 2:3077800/1‑91 (MQ=255) aTCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGgtgt < 2:2973149/91‑1 (MQ=255) gtgtAAAGACTAGAGTGATG‑C‑ACCAACTGATATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCgg < 2:2024045/91‑1 (MQ=255) tAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCa > 1:2955005/1‑91 (MQ=255) ctcataaataAGTGATG‑ATACCAGTTGGTG‑CATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCa < 2:228482‑M1/81‑1 (MQ=255) ctcataaataAGTGATG‑ATACCAGTTGGTG‑CATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCa < 1:413402‑M1/81‑1 (MQ=255) aaaGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCAt > 1:849415/1‑91 (MQ=255) cataaataAGTGATGAT‑ACCAGTTGGTG‑CATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCAtt < 1:627894‑M1/83‑1 (MQ=255) aGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCAttt > 2:3789799/1‑91 (MQ=255) gACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCAtttt < 1:3595295/91‑1 (MQ=255) cTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCATTTTAc > 1:2532153/1‑91 (MQ=255) cTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCATTTTAc > 1:2013569/1‑91 (MQ=255) tAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCATTTTACa < 1:3850208/91‑1 (MQ=255) agagTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCATTTTACaa < 1:2146450/91‑1 (MQ=255) AGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCATTTTACAATa < 1:985926‑M1/91‑1 (MQ=255) | CCTATTTATACACATATACCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAATCAAACAATTCTTAATCGTGTAAAGACTAGAGTGATG‑C‑ACCAACTGGTATCATCACTTATTTATGAGAATATTGTTGTGTATAAAGCGTCATATCAAGACGGTGTCGGTCATTTTACAATA > USA300TCH1516_ALE/141021‑141201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |