| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 374491 = | 136 (0.710) | 16 (0.090) | 11/144 | NT | 11.1% | intergenic (+109/+133) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein |
| ? | USA300TCH1516_ALE | 374527 = | 135 (0.790) | intergenic (+145/+97) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein | |||||
Only 100 of 273 total aligned reads displayed.
ATATGCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTG > USA300TCH1516_ALE/374401‑374581 | ttattttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagatac > 2:2099769‑M1/91‑91 (MQ=255)ttattttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagatac > 2:1639002‑M1/91‑91 (MQ=255)atatGCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGC < 1:1569026‑M1/91‑1 (MQ=255) tattttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCg > 2:732561‑M1/90‑91 (MQ=255) tattttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCg < 2:1330852‑M1/2‑1 (MQ=255) tatGCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCG < 1:714531‑M1/91‑1 (MQ=255) attttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGc > 2:1806887‑M1/89‑91 (MQ=255) attttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGc > 1:146948‑M1/89‑91 (MQ=255) atGTTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGC < 1:3009027‑M1/91‑1 (MQ=255) ttttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGcc < 1:1289761‑M1/4‑1 (MQ=255) tGCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCC > 1:2469722‑M1/1‑91 (MQ=255) tGCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCC > 1:3391536‑M1/1‑91 (MQ=255) tGCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCC > 2:1549231‑M1/1‑91 (MQ=255) gCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCT < 2:2859134‑M1/91‑1 (MQ=255) taaaaaactcaatttatcatcatgataaactgttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGt < 2:1194762‑M1/7‑1 (MQ=255) tATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGT < 2:905461‑M1/91‑1 (MQ=255) aaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGtc < 1:638812‑M1/8‑1 (MQ=255) gTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGtctc > 1:1128775/1‑91 (MQ=255) aaaTCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCAt < 1:572258/91‑1 (MQ=255) tCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAg < 2:1128775/91‑1 (MQ=255) cGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagt > 2:1582777‑M1/1‑83 (MQ=255) gTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCg < 1:1856447/91‑1 (MQ=255) tGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGa < 2:1123352/91‑1 (MQ=255) tGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTAAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGa > 2:3426777/1‑91 (MQ=255) gCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGaa > 2:547456/1‑91 (MQ=255) gCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGaa < 1:2249459/91‑1 (MQ=255) gCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGaa > 2:1007378/1‑91 (MQ=255) cTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGaaa > 1:1384535/1‑91 (MQ=255) cTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGaaa > 2:3743811/1‑91 (MQ=255) gTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAAc > 1:3708445/1‑91 (MQ=255) ttATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACt > 2:2662376/1‑91 (MQ=255) tATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGACTGTCcctttagttttcgcta < 1:2617765‑M1/91‑17 (MQ=255) aTCACGGCACATCAGATATAAGTAGCATCACATTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcttttagttttcgctaa < 1:3310445‑M1/91‑18 (MQ=255) aTCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaa < 2:403868‑M1/91‑18 (MQ=255) tcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTaaa > 2:2476563‑M1/66‑91 (MQ=255) tCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTaaa < 2:3151416/91‑1 (MQ=255) tCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTCAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTaaa > 1:3362490/1‑91 (MQ=255) cACGGCATATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAg > 2:3462341/1‑91 (MQ=255) cACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatg < 1:2843333‑M1/91‑20 (MQ=255) cACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgc < 1:611422‑M1/86‑15 (MQ=255) cGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgag < 1:2180938‑M1/91‑22 (MQ=255) cGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgag < 1:3809618‑M1/91‑22 (MQ=255) cGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgag < 1:3829068‑M1/91‑22 (MQ=255) cGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGg < 2:3653270‑M2/91‑2 (MQ=255) ggCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgaga < 1:2947783‑M1/91‑23 (MQ=255) gataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGa > 1:1660759‑M1/62‑91 (MQ=255) gCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgagac < 1:1720465‑M1/91‑24 (MQ=255) gCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAA‑AAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgaca > 2:2188103‑M2/1‑87 (MQ=255) taaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGACa > 2:292101‑M1/60‑91 (MQ=255) cacaTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgaca < 2:1606262‑M2/91‑5 (MQ=255) caTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacagg < 1:1896942‑M2/91‑7 (MQ=255) aacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGACAgg > 2:1884703‑M1/58‑91 (MQ=255) aTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggc < 2:2318578‑M2/91‑8 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg < 1:1971856‑M2/91‑9 (MQ=255) cAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTaaa < 2:2762639/80‑1 (MQ=255) gATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTAt > 2:1594602/1‑91 (MQ=255) ataAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgagacaggcgctttat < 1:1380641‑M1/91‑35 (MQ=255) taAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGt > 2:3269590/1‑91 (MQ=255) aTCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGc < 1:39275/91‑1 (MQ=255) aTCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGc < 2:3491572/91‑1 (MQ=255) cacaGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCtt > 1:911354/1‑91 (MQ=255) cacaGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCtt > 1:2098994/1‑91 (MQ=255) caGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactat < 1:1582797‑M1/91‑48 (MQ=255) caGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa < 1:3741836/91‑1 (MQ=255) caGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa > 1:1141667/1‑91 (MQ=255) aGTGTTGAATTTAAAAATGGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat < 1:1857167/91‑1 (MQ=255) aGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat < 2:1388335/91‑1 (MQ=255) gtgtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaata > 2:344490/1‑91 (MQ=255) gtgtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaata > 1:1330852/1‑91 (MQ=255) tgtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaataa > 1:3497418/1‑91 (MQ=255) gtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATaaa > 1:2408633/1‑91 (MQ=255) gtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATaaa > 1:1219237/1‑91 (MQ=255) ttGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAt < 1:3723314/91‑1 (MQ=255) tGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAtt > 2:2530117/1‑91 (MQ=255) tGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAtt > 1:2235067/1‑91 (MQ=255) aaaaaTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaa < 2:2297740/91‑1 (MQ=255) aTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataat > 2:409203/1‑91 (MQ=255) tAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAataata > 1:896891/1‑91 (MQ=255) tAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAataata < 1:365447/91‑1 (MQ=255) aGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAatat > 2:988394/1‑91 (MQ=255) aGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAatat > 1:1834226/1‑91 (MQ=255) gtcaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACCAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGCATAATATg > 2:174702/4‑91 (MQ=255) gTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATg < 1:2704941/91‑1 (MQ=255) tAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCATATCTGTTTATGAGCTTAATAAATTGTATGAATAATATgg < 2:3593774/91‑1 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 2:67829/1‑91 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 2:1275649/1‑91 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 2:1967965/1‑91 (MQ=255) tGAAATAAAGCGCCTGTCTCATTAGCGAAGACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGAt < 1:3111028/91‑1 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaat < 2:3046056/75‑1 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGaa > 1:471543/1‑91 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa < 1:2543717/91‑1 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa > 1:1264173/1‑91 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa < 2:1998738/91‑1 (MQ=255) gcgcCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACt > 1:2763291/1‑91 (MQ=255) aCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGGGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACt > 1:2277494‑M1/2‑91 (MQ=255) cgcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctga < 1:2811777‑M1/91‑84 (MQ=255) cgcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctga > 1:2828910‑M1/1‑8 (MQ=255) CGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTg < 2:387123‑M1/91‑1 (MQ=255) CGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTg > 2:644586‑M1/1‑91 (MQ=255) CGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTg < 1:1118918‑M1/91‑1 (MQ=255) | ATATGCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTG > USA300TCH1516_ALE/374401‑374581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |