| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 374498 | 141 (0.740) | 27 (0.160) | 14/144 | NT | 17.1% | intergenic (+116/+126) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein |
| ? | USA300TCH1516_ALE | = 374518 | 135 (0.790) | intergenic (+136/+106) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein | |||||
Only 100 of 268 total aligned reads displayed.
ATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCA > USA300TCH1516_ALE/374408‑374588 | aaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGtc < 1:638812‑M1/8‑1 (MQ=255) gTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGtctc > 1:1128775/1‑91 (MQ=255) gTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGtctc < 2:2731334/91‑1 (MQ=255) aaaTCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCAt < 1:572258/91‑1 (MQ=255) aTCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTa > 1:860517/1‑91 (MQ=255) aTCGTGCTGTTATCACAGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTa > 2:1555130/1‑91 (MQ=255) tCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAg > 1:2296746/1‑91 (MQ=255) cGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagt > 2:1582797‑M1/1‑83 (MQ=255) gTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCg < 1:1857611/91‑1 (MQ=255) gTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCg < 1:1856563/91‑1 (MQ=255) tGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGa > 1:3349382/1‑91 (MQ=255) tGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGa < 2:1123352/91‑1 (MQ=255) gCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGaa > 2:547456/1‑91 (MQ=255) gCTGTTATCACGGCACATCAGATATAAGGAGCATCACAGTGGGGAATGTAAGAATAGTAAAGTGGAATAAAGCGCCTGTCTCATTAGCGaa < 2:3871764/91‑1 (MQ=255) gCTGTTACCACGGCACATCAGATATAAGTAGCATCACAGTGTTGACTTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGaa > 2:1007350/1‑91 (MQ=255) cTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGaaa < 2:2901991/91‑1 (MQ=255) aTCACGGCACATCAGATATAAGTAGCATCACATTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcttttagttttcgctaa < 1:3310445‑M1/91‑18 (MQ=255) tCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTaaa < 1:2602832/91‑1 (MQ=255) tCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTaaa < 2:3151416/91‑1 (MQ=255) catgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAg > 2:117033‑M1/65‑91 (MQ=255) cACGGCATATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAg > 2:3462341/1‑91 (MQ=255) cACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatg < 1:1392198‑M1/91‑20 (MQ=255) cACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatg < 1:2843333‑M1/91‑20 (MQ=255) cACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgc < 1:611422‑M1/86‑15 (MQ=255) aCGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatga < 1:3458823‑M1/91‑21 (MQ=255) cGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgag < 1:3809618‑M1/91‑22 (MQ=255) cGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgag < 1:2180938‑M1/91‑22 (MQ=255) cGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgag < 1:1292776‑M1/91‑22 (MQ=255) ggCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgaga < 1:2947783‑M1/91‑23 (MQ=255) gataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGa > 1:1660759‑M1/62‑91 (MQ=255) gataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGa > 1:898320‑M1/62‑91 (MQ=255) gCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgagac < 1:1720465‑M1/91‑24 (MQ=255) ataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGAc > 1:2202672‑M1/61‑91 (MQ=255) cacaTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgaca < 2:1606262‑M2/91‑5 (MQ=255) acaTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacag > 2:117286‑M2/1‑86 (MQ=255) caTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacagg < 1:1896942‑M2/91‑7 (MQ=255) aTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggc < 2:2317485‑M2/91‑8 (MQ=255) aTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggc > 2:794491‑M2/1‑84 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg < 1:2811777‑M2/91‑9 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg > 1:1714659‑M2/1‑83 (MQ=255) cAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGt > 2:707420/1‑91 (MQ=255) aGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTa < 2:993496/91‑1 (MQ=255) aGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTa < 1:1499716/91‑1 (MQ=255) gATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgagacaggcgctt < 2:3749281‑M1/91‑32 (MQ=255) tataAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCt > 2:1850624/1‑91 (MQ=255) ataAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgagacaggcgctttat < 1:1380641‑M1/91‑35 (MQ=255) taAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGt > 2:3269590/1‑91 (MQ=255) aGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATg > 2:676494/1‑91 (MQ=255) aTCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGc < 1:39275/91‑1 (MQ=255) aTCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGc < 2:3491572/91‑1 (MQ=255) tCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCt < 1:3509267/91‑1 (MQ=255) cacaGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCtt > 1:2098994/1‑91 (MQ=255) cacaGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCtt > 2:1988030/1‑91 (MQ=255) cacaGTGTTGAAGTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCtt > 1:2977663/1‑91 (MQ=255) caGTGTTGAGTTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa < 1:3718917/91‑1 (MQ=255) aGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat < 2:1388335/91‑1 (MQ=255) gtgtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaata > 1:1330852/1‑91 (MQ=255) tgtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaataa > 2:373786/1‑91 (MQ=255) gtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATaaa > 1:1219364/1‑91 (MQ=255) ttGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAt < 2:3023451/91‑1 (MQ=255) ttGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAt < 1:3723505/91‑1 (MQ=255) tGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAtt > 2:2531138/1‑91 (MQ=255) aaTTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGt > 1:2686967/1‑91 (MQ=255) tAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGa > 1:1839880/1‑91 (MQ=255) aaaaaTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaa < 2:2297740/91‑1 (MQ=255) aTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataat > 2:407253/1‑91 (MQ=255) aTAGTAAAGTGAAACAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactg < 1:1582777‑M2/91‑45 (MQ=255) tAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAataata < 1:365447/91‑1 (MQ=255) aGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAatat > 1:2263757/1‑91 (MQ=255) gtcaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACCAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGCATAATATg > 2:174702/4‑91 (MQ=255) tAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATgg > 2:2401903/1‑91 (MQ=255) tAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATgg < 2:3593552/91‑1 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 2:1275649/1‑91 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 1:2238009/1‑91 (MQ=255) gTGAAATAAAGCGCCTGTCTCATTAGAGAAACATAAAGGGACAGGCGTATCTGCTTATGAGCTTAATAAATTGTATGAATAATATGGTTGa > 2:2522835/1‑91 (MQ=255) tGAAATAAAGCGCCTGTCTCATTAGCGAAGACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGAt < 1:3111028/91‑1 (MQ=255) aaaTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGGGCTTAATAAATTGTATGAATAATATGGTTGATCg > 1:2495854/1‑91 (MQ=255) aaTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGa < 2:636803/91‑1 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGaa > 1:471543/1‑91 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctaattatatc < 2:3439444‑M2/91‑61 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa < 2:1998738/91‑1 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa > 1:1264182/1‑91 (MQ=255) aGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAAc > 1:1137796/1‑91 (MQ=255) gcgcCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACt > 1:2763291/1‑91 (MQ=255) cgcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctga < 1:1971856‑M1/91‑84 (MQ=255) cgcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctga > 1:2828910‑M1/1‑8 (MQ=255) CGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTg < 1:1118918‑M1/91‑1 (MQ=255) gcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgat > 2:1957208‑M1/1‑7 (MQ=255) ccTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatg < 1:956840‑M1/91‑86 (MQ=255) cTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgt < 1:2715442‑M1/91‑87 (MQ=255) tGTCcctttagttttcgctaatgagacaggcgcttttttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgc > 2:2188103‑M1/1‑4 (MQ=255) tGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtg > 2:1378655‑M1/1‑4 (MQ=255) tGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtg < 2:1606210‑M1/91‑88 (MQ=255) tGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtg > 2:2271374‑M1/1‑4 (MQ=255) TGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTa < 1:1251351‑M1/91‑1 (MQ=255) gTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgc > 2:2877409‑M1/1‑3 (MQ=255) GTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTAt < 2:3431432‑M1/91‑1 (MQ=255) GTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTAt < 2:3332036‑M1/91‑1 (MQ=255) ctcATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccg < 1:3829068‑M2/91‑71 (MQ=255) ccctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccg < 2:3653270‑M1/91‑91 (MQ=255) | ATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCA > USA300TCH1516_ALE/374408‑374588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |