| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 374498 | 141 (0.740) | 27 (0.160) | 14/144 | NT | 17.1% | intergenic (+116/+126) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein |
| ? | USA300TCH1516_ALE | = 374518 | 135 (0.790) | intergenic (+136/+106) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein | |||||
Only 100 of 231 total aligned reads displayed.
CGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGTTTTT > USA300TCH1516_ALE/374429‑374608 | gataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGa > 1:898338‑M1/62‑91 (MQ=255) gataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGa > 1:1660759‑M1/62‑91 (MQ=255) gCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgac > 2:2877409‑M2/1‑88 (MQ=255) gCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAA‑AAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgaca > 2:2188103‑M2/1‑87 (MQ=255) ataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGAc > 1:2202672‑M1/61‑91 (MQ=255) cacaTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgaca < 2:1606262‑M2/91‑5 (MQ=255) cacaTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgaca > 2:2271374‑M2/1‑87 (MQ=255) acaTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAGAACTAAAGGgacag > 2:3298417‑M2/1‑86 (MQ=255) acaTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacag < 1:2715442‑M2/91‑6 (MQ=255) aaacagttgtgcgatcaaccatattattcatacaatttattaagcgctgagacagataCGCCGGTCTCATTAGCGAAAACTAAAGGGACAg > 2:73901‑M1/59‑91 (MQ=255) caTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacagg < 1:956840‑M2/91‑7 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg > 1:3845015‑M2/1‑83 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg < 1:1971856‑M2/91‑9 (MQ=255) cagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCg > 1:3513447‑M1/56‑91 (MQ=255) gATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTAt > 2:1594602/1‑91 (MQ=255) tataAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCt > 2:1850624/1‑91 (MQ=255) ataAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTg > 1:1874931/1‑91 (MQ=255) aGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGttt < 1:3334675/91‑1 (MQ=255) aGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATg > 2:676494/1‑91 (MQ=255) aTCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGc < 2:3491572/91‑1 (MQ=255) cacaGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCtt > 1:2098994/1‑91 (MQ=255) cacaGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCtt < 2:2309795/91‑1 (MQ=255) acaGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTta > 1:2816263/1‑91 (MQ=255) caGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa > 2:221933/1‑91 (MQ=255) caGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa > 1:1141667/1‑91 (MQ=255) aGTGTTGAATTTAAAAGTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat < 2:3708445/91‑1 (MQ=255) aGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat < 1:215891/91‑1 (MQ=255) aGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat < 1:1856861/91‑1 (MQ=255) aGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat < 2:1388335/91‑1 (MQ=255) gtgtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaata > 2:344490/1‑91 (MQ=255) tgtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaataa > 1:3497418/1‑91 (MQ=255) gtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATaaa > 1:2408633/1‑91 (MQ=255) gtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATaaa > 1:1219237/1‑91 (MQ=255) ttGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAt < 1:3723505/91‑1 (MQ=255) ttGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAt < 1:3723314/91‑1 (MQ=255) ttGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAt < 1:518253/91‑1 (MQ=255) tAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGa < 2:3630093/91‑1 (MQ=255) tAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGa > 1:644586/1‑91 (MQ=255) aaTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataa > 2:1731511/1‑91 (MQ=255) aaTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCATATCTGTTTATGAGCTTAATAAATTGTATGaataa > 1:462711/1‑91 (MQ=255) aTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataat > 2:407253/1‑91 (MQ=255) aTAGTAAAGTGAAACAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactg < 1:1582777‑M2/91‑45 (MQ=255) tAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAataata < 2:1230943/91‑1 (MQ=255) tAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAataata < 1:365447/91‑1 (MQ=255) tAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAataata > 1:896891/1‑91 (MQ=255) aGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAatat > 2:988394/1‑91 (MQ=255) aGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAatat > 1:1834226/1‑91 (MQ=255) aGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAatat > 1:2263757/1‑91 (MQ=255) gTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATg > 2:3478641/1‑91 (MQ=255) tAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATgg < 2:3593552/91‑1 (MQ=255) tAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATgg > 2:2401903/1‑91 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 1:2014593/1‑91 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 2:1967965/1‑91 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 1:2238009/1‑91 (MQ=255) aGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTg > 1:280891/1‑91 (MQ=255) gTGAAATAAAGCGCCTGTCTCATTAGAGAAACATAAAGGGACAGGCGTATCTGCTTATGAGCTTAATAAATTGTATGAATAATATGGTTGa > 2:2522835/1‑91 (MQ=255) aaaTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGGGCTTAATAAATTGTATGAATAATATGGTTGATCg > 1:2495854/1‑91 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttat < 1:2891680‑M2/91‑58 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttat < 1:1380641‑M2/91‑58 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaat < 2:3046056/75‑1 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaat > 1:3046056/1‑75 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaat > 1:1425364/1‑75 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGaa > 1:2630520/1‑91 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa > 2:1124560/1‑91 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa > 1:1264173/1‑91 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa < 2:1998738/91‑1 (MQ=255) aGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAAc > 2:3255309/1‑91 (MQ=255) gcgcCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACt > 1:134404/1‑91 (MQ=255) CGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTg > 2:644586‑M1/1‑91 (MQ=255) CGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTg > 2:2936835‑M1/1‑91 (MQ=255) CGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTg < 1:1118918‑M1/91‑1 (MQ=255) CGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTg > 2:1312616‑M1/1‑91 (MQ=255) CGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTg < 1:3127952‑M1/91‑1 (MQ=255) CGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTg < 2:387123‑M1/91‑1 (MQ=255) gcCTGTCTCATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgat < 1:580364‑M2/91‑65 (MQ=255) GCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGt > 2:2441177‑M1/1‑91 (MQ=255) TGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTa > 1:1720411‑M1/1‑91 (MQ=255) TGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTa < 1:1251351‑M1/91‑1 (MQ=255) GTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTAt < 2:2672743‑M1/91‑1 (MQ=255) GTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTAt < 2:3431432‑M1/91‑1 (MQ=255) tctcATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgcc < 1:2947783‑M2/91‑70 (MQ=255) ctcATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccg < 1:1137414‑M2/91‑71 (MQ=255) ctcATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccg < 1:1292708‑M2/91‑71 (MQ=255) tcATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccgt < 1:3458823‑M2/91‑72 (MQ=255) ttAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccgtgat < 2:1761769‑M2/91‑75 (MQ=255) ttAGCGAAAACTAAAGGGACAGGCGTATCTGATTATGAGCTTAATAAATGGTATGAATAATATGGTTGATCGAATAACTGTTTATCatgat > 2:885361/1‑91 (MQ=255) tggCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCatgatg > 2:1419950/3‑91 (MQ=255) tAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCatgatg < 1:3294161/91‑1 (MQ=255) gCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccgtg < 1:611422‑M2/86‑73 (MQ=255) cGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTATTTATCATCATGATa < 2:1524027/91‑1 (MQ=255) aaaCTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCatgat < 1:1695364/84‑1 (MQ=255) aaaCTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAAt > 2:628011/1‑91 (MQ=255) aaaCTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAAt < 1:2543065/91‑1 (MQ=255) aaCTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAAtt > 2:150455/1‑91 (MQ=255) aaCTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAAtt > 1:2579813/1‑91 (MQ=255) aaCTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAAtt > 2:493432/1‑91 (MQ=255) aCTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccgtgataacagcacg > 2:1582777‑M2/1‑8 (MQ=255) aCTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTg < 1:3743811/91‑1 (MQ=255) aaGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGtt < 2:1923689/91‑1 (MQ=255) aGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGttt > 1:2284458/1‑91 (MQ=255) | CGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGTTTTT > USA300TCH1516_ALE/374429‑374608 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |