| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 426001 = | 221 (1.160) | 12 (0.070) | 7/140 | NT | 6.1% | intergenic (+9/+57) | gpmA_1/USA300HOU_RS02000 | 2,3‑bisphosphoglycerate‑dependent phosphoglycerate mutase/hypothetical protein |
| ? | USA300TCH1516_ALE | 426042 = | 177 (1.060) | intergenic (+50/+16) | gpmA_1/USA300HOU_RS02000 | 2,3‑bisphosphoglycerate‑dependent phosphoglycerate mutase/hypothetical protein | |||||
Only 100 of 288 total aligned reads displayed.
GATGGTTTATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCAACAGACTTACCA > USA300TCH1516_ALE/425911‑426091 | gATGGTTTATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATaga < 2:1552623/91‑1 (MQ=255) tattttgttcacaagcacaattatcacattagccattggtggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAg < 2:1265520‑M1/2‑1 (MQ=255) tattttgttcacaagcacaattatcacattagccattggtggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAg > 1:3789648‑M1/90‑91 (MQ=255) tattttgttcacaagcacaattatcacattagccattggtggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAg > 1:3798253‑M1/90‑91 (MQ=255) aTGGGTTATTTTAACAAAGCTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATagag > 2:2854054/1‑91 (MQ=255) tGGTTTATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAgg > 2:1939968/1‑91 (MQ=255) tGGTTTATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAgg > 1:3417328/1‑91 (MQ=255) tGGTTTATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAgg > 1:2058647/1‑91 (MQ=255) attttgttcacaagcacaattatcacattagccattggtggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAgg < 2:1141470‑M1/3‑1 (MQ=255) ttttgttcacaagcacaattatcacattagccattggtggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAGGt < 2:1913284‑M1/4‑1 (MQ=255) ggTTTATTTTAGCAAAGTTTCAAGGGCAGAAGCTGTGGATGTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGt < 2:1502164/91‑1 (MQ=255) ggTTTATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGt > 1:1299751/1‑91 (MQ=255) tttATTTTAACAAAGTTTCAAGGGTAGAAGCTGTGGATTTAAACGTAGAATAGTTCAAGCCAGATATCATTGAATAGAAGTATAGAGGTTc < 2:3607869/91‑1 (MQ=255) tttATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTACAGAGGTTc > 2:1547140/1‑91 (MQ=255) ttATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCt > 1:3461400/1‑91 (MQ=255) ttATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCt > 1:3346022/1‑91 (MQ=255) ttATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCt > 1:923507/1‑91 (MQ=255) tgttcacaagcacaattatcacattagccattggtggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAGGTTCt > 2:3535517‑M1/85‑91 (MQ=255) tgttcacaagcacaattatcacattagccattggtggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAGGTTCt > 1:331962‑M1/85‑91 (MQ=255) tgttcacaagcacaagtatcacattagccattggtggtaagtctgttgaaaagaatgaatccccttaaattccaaatgaaaaaaAGGTTCt < 1:3302114‑M1/7‑1 (MQ=255) tATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTg < 1:951572/91‑1 (MQ=255) gttcacaagcacaattatcacattagccattggtggtaagtctgttaaaaagaatgattccccttaaaaaaaaaaaaaaaaaaAGGTTCTg > 2:765893‑M1/84‑91 (MQ=255) aTTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGa < 1:1797578/91‑1 (MQ=255) tcacaagcacaattatcacattagccattggtggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAGGTTCTGaa > 2:3752747‑M1/82‑91 (MQ=255) tAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGaaaaa < 1:3825970/91‑1 (MQ=255) aCAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACt > 1:3697861/1‑91 (MQ=255) cAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACtg > 2:679285/1‑91 (MQ=255) aGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTgtgt < 1:662600/91‑1 (MQ=255) aGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTgtgt > 2:210765/1‑91 (MQ=255) aGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTgtgt < 2:981861/91‑1 (MQ=255) tCAAGGGCAGAAGCTGTGGATTTAAACGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTta > 2:2214016/1‑91 (MQ=255) cAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTtat < 2:2401621/91‑1 (MQ=255) cAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTtat > 1:1487885/1‑91 (MQ=255) aaGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTtata > 1:3655477/1‑91 (MQ=255) aGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAg > 1:305947/1‑91 (MQ=255) aGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAg < 2:3042164/91‑1 (MQ=255) ggCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCg > 1:2137331/1‑91 (MQ=255) ggCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCg > 2:613457/1‑91 (MQ=255) cAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGc > 2:1042570/1‑91 (MQ=255) cAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGc < 2:3156579/91‑1 (MQ=255) cAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGc > 1:1727172/1‑91 (MQ=255) cAGAAGCTGTAGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTAAAAAACTGTGTTTTATAGCGGc < 2:3401799/91‑1 (MQ=255) aaGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCtt > 2:914026/1‑91 (MQ=255) ccattggtggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTc > 2:348383‑M1/58‑91 (MQ=255) aGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTc > 1:1840041/1‑91 (MQ=255) tgtgGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGa > 1:1000789/1‑91 (MQ=255) gtgGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGaa > 1:786376/1‑91 (MQ=255) tgGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAAc < 2:2256398/91‑1 (MQ=255) gtggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAAcc > 1:2785558‑M1/52‑91 (MQ=255) ggATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAAcc < 1:3535723/91‑1 (MQ=255) tggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCt > 2:720926‑M1/51‑91 (MQ=255) gATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCt < 1:2247263/91‑1 (MQ=255) ggtaagtctgttgaaaagaatgattccccttaaattccaaatgaaaaaaAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCtt > 1:3144957‑M1/50‑91 (MQ=255) ttAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCtttt < 1:3833672/91‑1 (MQ=255) tAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCttttt < 2:2033005/91‑1 (MQ=255) tAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCttttt < 2:108588/91‑1 (MQ=255) aaaGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCtttttt < 2:1237930/91‑1 (MQ=255) aaaGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCattttt > 2:3570361/1‑91 (MQ=255) aGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTc < 1:2579547/91‑1 (MQ=255) gTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACCGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCAt < 1:2764177/91‑1 (MQ=255) aGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCAttt < 1:1221487/91‑1 (MQ=255) aaaaTCGCAAACCATATATCATTGATTAGAAGTATAGAGGTTCTGAAAAACTGGGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTgg < 1:3604712/91‑1 (MQ=255) aaaTTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGa < 2:286977/91‑1 (MQ=255) aaaTTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGa > 2:902016/1‑91 (MQ=255) aaaTTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGa < 2:1366909/91‑1 (MQ=255) aaaTTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGa < 2:1367494/91‑1 (MQ=255) tGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAAttt > 2:3196877/1‑91 (MQ=255) tGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAAttt > 2:1586020/1‑91 (MQ=255) gCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTa > 1:41863/1‑91 (MQ=255) gCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTa > 2:55270/1‑91 (MQ=255) cAAACCATATATAATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTaa > 1:2975292/1‑91 (MQ=255) aaaCCGTATATCATTGAAAAGAAGTTCAGGGGTTCTGAAGACCAGTGTTTTATAGCGGCCTTCAGATACATTGTGTCAATTGGAATTTAAg < 2:416477/91‑1 (MQ=255) ccATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAgggg > 2:1748379/1‑91 (MQ=255) cATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGa > 1:533396/1‑91 (MQ=255) atatatCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGaa < 1:1574927/91‑1 (MQ=255) atatatCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGaa > 1:1589649/1‑91 (MQ=255) atatatCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGaa < 2:3097027/91‑1 (MQ=255) atatatCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGaa > 2:2522543/1‑91 (MQ=255) tatatCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAAt < 2:81056/91‑1 (MQ=255) tatatCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAAt < 2:1796758/91‑1 (MQ=255) atatCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATc < 2:1689933/91‑1 (MQ=255) atatCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATc > 2:2112527/1‑91 (MQ=255) tatCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAA‑CTTTTTTTCATTTGGAATTTAAGGGGAATCAt < 2:2225412/91‑1 (MQ=255) atCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCAt < 2:447003/91‑1 (MQ=255) atCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCAt < 2:2539517/91‑1 (MQ=255) tCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCAtt < 1:1042570/91‑1 (MQ=255) gAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCtttt > 1:1353241/1‑91 (MQ=255) aaTAGAGGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTc < 2:2686692/91‑1 (MQ=255) aaTAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTc < 2:3317532/91‑1 (MQ=255) aTAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCa > 1:1759639/1‑91 (MQ=255) tAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCaa > 1:688364/1‑91 (MQ=255) aaGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCAACAg < 1:3860043/91‑1 (MQ=255) aGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCAACAGa > 1:2687624/1‑91 (MQ=255) aGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCAACAGa > 1:2504954/1‑91 (MQ=255) aGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCAACAGa < 1:1647265/91‑1 (MQ=255) ataGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCAACAGACtt < 2:2808940/91‑1 (MQ=255) ataGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCAACAGACtt < 2:2779878/91‑1 (MQ=255) agagGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCAACAGACTTac < 2:3730891/91‑1 (MQ=255) gagGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCAACAGACTTacc < 2:1633242/91‑1 (MQ=255) gagGTTCTGAAAAACTGTGTTTTATAGCGGCCATCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCAACAGACTTacc < 2:1949063/91‑1 (MQ=255) | GATGGTTTATTTTAACAAAGTTTCAAGGGCAGAAGCTGTGGATTTAAAGGTAGAAAATTGCAAACCATATATCATTGAATAGAAGTATAGAGGTTCTGAAAAACTGTGTTTTATAGCGGCCTTCAGAACCTTTTTTTCATTTGGAATTTAAGGGGAATCATTCTTTTCAACAGACTTACCA > USA300TCH1516_ALE/425911‑426091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |