| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 954695 = | 155 (0.810) | 51 (0.290) +GGCAAG |
11/148 | NT | 24.7% | intergenic (+349/+154) | gluD/glpQ_1 | NAD‑specific glutamate dehydrogenase/Glycerophosphodiester phosphodiesterase |
| ? | USA300TCH1516_ALE | 1873938 = | 181 (0.950) | intergenic (‑614/+136) | USA300HOU_RS09300/USA300HOU_RS09305 | Putative dipeptidase/hypothetical protein | |||||
Only 100 of 227 total aligned reads displayed.
ATTAGCTCCTCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATAT > USA300TCH1516_ALE/954605‑954785 | aTTAGCTCCTCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTg < 1:1621175/91‑1 (MQ=255) aGCTCCTCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTgggg > 1:3165808/1‑91 (MQ=255) aGCTCCTCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTgggg > 2:1137047/1‑91 (MQ=255) aGCTCCTCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTgggg > 1:2113147/1‑91 (MQ=255) aGCTCCTCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTgggg < 1:3378638/91‑1 (MQ=255) aGCTCCTCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGAGCAAGATgggg > 2:3591333/1‑91 (MQ=255) gCTCCTCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGt > 2:1086803/1‑91 (MQ=255) gCTCCTCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGt > 2:2457017/1‑91 (MQ=255) cAATTTCTACAGACAATGCAAGTCGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGgacg > 1:3340608/1‑91 (MQ=255) ttCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGAcgacga < 1:1388288/91‑1 (MQ=255) tCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAGGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGaa < 1:2932604/91‑1 (MQ=255) tCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGaa < 1:3682817/91‑1 (MQ=255) caccAGACAGTGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGaaa < 2:1195142/88‑1 (MQ=255) tACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGaaat > 1:3381746/1‑91 (MQ=255) tACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGaaat < 1:3805513/91‑1 (MQ=255) caCAGACAATGCAAGTGGGCGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGaaat < 2:3409549/90‑1 (MQ=255) cAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGaaataa > 2:1900217/1‑91 (MQ=255) aGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGaaataaa > 2:2571876/1‑91 (MQ=255) aCAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAAtt < 1:1636204/91‑1 (MQ=255) aaggttgactagaattgaaaaaagcttgttacaagcgtattttcattcagtcaactactgccGGGGTGGGACGACGAAATAAATTTtgcta < 2:90063‑M1/29‑3 (MQ=255) aaGTGGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGaa < 2:2243921/91‑1 (MQ=255) aGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGaaa < 1:1762200/91‑1 (MQ=255) aGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGaaa < 2:3162714/91‑1 (MQ=255) ttgactagaattgaaaaaagcttgttacaagcgaattttcgttcagtcaactactgccGGGGTGGGACGACGAAATAAATTTTACGAAAat < 2:434305‑M1/33‑1 (MQ=255) taggCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAat < 2:930524/89‑1 (MQ=255) tGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAata < 2:2818051/91‑1 (MQ=255) gagactagaattgaaaaaagcttgttacaagcgcattttcgttcagtcaaccttgctGGGGTGGGACGACGAAATAAATTGTGCGAGaatg < 2:2132283‑M1/34‑2 (MQ=255) tgactagaattgaaaaaagcttgttacaagcgtattttcattcagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTGCTAAAatat < 2:601656‑M1/35‑1 (MQ=255) tgactagaattgaaaaaagcttgttacaagcgaattttcgttcagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTACGAAAatat < 2:2638704‑M1/35‑1 (MQ=255) ggCGGGGCCCCAACACAGAAGCTGGCGGAAAGTCAACTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAatat < 2:2389409/91‑1 (MQ=255) ggCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAatat < 2:13170/91‑1 (MQ=255) gactagaattgaaaaaagcttgttacaagcgcattttcgttcagtcaaccttgctGGGGTGGGACGACGAAATAAATTTTGCGAAAATATc < 2:745865‑M1/36‑1 (MQ=255) gactagaattgaaaaaagcttgttacaagcgaattttcgttcagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTACGAAAATATc < 1:3264891‑M1/36‑1 (MQ=255) cGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCa < 1:1247248/91‑1 (MQ=255) cGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCa > 1:2498410/1‑91 (MQ=255) actagaattgaaaaaagcttgttacaagcgcattttcgttcagtcaaccttgctGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCa < 2:3788954‑M1/37‑1 (MQ=255) actagaattgaaaaaagcttgttacaagcgcattttcgttcagtcaaccttgctGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCa < 2:2436375‑M1/37‑1 (MQ=255) actagaattgaaaaaagcttgttacaagcgaattttcgttcagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTACGAAAATATCa < 1:3575868‑M1/37‑1 (MQ=255) actagaattgaaaaaagcttgttacaagcgaattttcgttcagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTACGAAAATATCa < 1:3576447‑M1/37‑1 (MQ=255) tagaattgaaaaaagcttgttacaagcgcattttcgttcagtcaaccttgctGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCAtt < 2:1424903‑M1/39‑1 (MQ=255) tagaattgaaaaaagcttgttacaagcgcattttcgttcagtcaaccttgctGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCAtt < 2:2052665‑M1/39‑1 (MQ=255) agaattgaaaaaagcttgttacaagcgtattttcattcagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTGCTAAAACATGAttt < 2:3454155‑M1/40‑1 (MQ=255) aattgaaaaaagcttgttacaagcgaattttcaattctagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTACGAACATATCAttt < 2:136710‑M1/40‑1 (MQ=255) gaattgaaaaaagcttgttacaagcgtattttcattcagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTGCTAAAATATGATTTc < 1:1167195‑M1/41‑1 (MQ=255) gCCCCAACACAGAAGCTGGCGTAAAGTCAGCTTACAAGAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATGTTGCGAAAATATCATTTc < 2:922506/91‑1 (MQ=255) tgaaaaaagcttgttacaagcgaattttcaattctagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTg < 2:1597362‑M1/43‑1 (MQ=255) cccAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTg < 1:1463762/91‑1 (MQ=255) attgaaaaaagcttgttacaagcgtattttcattcagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTGCTAAAATATGATTTCTg < 1:231737‑M1/43‑1 (MQ=255) ccAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGt > 1:338824/1‑91 (MQ=255) cAACACAGAGGCTGGTGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTc > 1:1312297/1‑91 (MQ=255) aaaaaagcttgttacaagcgaattttcaattctagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTc < 2:3819363‑M1/45‑1 (MQ=255) aaaaaagcttgttacaagcgaattttcaattctagtcaaccttgccGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTc < 1:169522‑M1/45‑1 (MQ=255) aaaaagcttgttacaagcgcattttcaattctagtcaaccttgctGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTcc < 1:214503‑M1/46‑1 (MQ=255) acacAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTccc > 2:1669846/1‑91 (MQ=255) cacaGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGaaaa < 1:1810806/75‑1 (MQ=255) cacaGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCa > 1:638632/1‑91 (MQ=255) acaGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCAc > 2:1239425/1‑91 (MQ=255) acaGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCAc < 2:1312256/91‑1 (MQ=255) caGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACt < 2:1592109/91‑1 (MQ=255) agagGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTc < 2:347829/91‑1 (MQ=255) aGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTc > 2:2725058/1‑91 (MQ=255) gAAGCTTGCGAAAAGTCAGCTTACAATGGTGGGCAAGTTCAGGTGAGACGACGGAATAAATCTTGCGAAGACATCATTTCGGTCCCAcccc > 2:2843159/1‑91 (MQ=19) aaGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTccc > 2:3835652/1‑91 (MQ=255) aaGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTccc < 1:2611852/91‑1 (MQ=255) aaGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTccc > 2:2938262/1‑91 (MQ=255) aGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCa > 2:2094717/1‑91 (MQ=255) ggCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCaaaaa > 1:789940/1‑91 (MQ=255) gAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGAc > 1:782709/1‑91 (MQ=255) aaaaGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGAca > 2:3381258/1‑91 (MQ=255) aaaaGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGAca > 2:2451481/1‑91 (MQ=255) aaaaGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGAca > 1:74339/1‑91 (MQ=255) aaaaGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAAGTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGAca < 2:3190626/91‑1 (MQ=255) aaGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGAcagc < 1:2651069/91‑1 (MQ=255) gTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGAcagcag < 1:150663/91‑1 (MQ=255) gTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGAcagcag < 2:3345630/91‑1 (MQ=255) tCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGt < 1:3525489/91‑1 (MQ=255) tCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGt > 1:3818332/1‑91 (MQ=255) cAGCTTACAATAGTGTTCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTa < 2:2982236/91‑1 (MQ=255) gCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAgg > 1:233793/1‑91 (MQ=255) gCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAgg > 2:3025813/1‑91 (MQ=255) gCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAgg > 1:2887914/1‑91 (MQ=255) cAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAAt < 2:2166929/91‑1 (MQ=255) aaTAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAAtt < 2:3553797/91‑1 (MQ=255) tAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTc < 1:3432761/91‑1 (MQ=255) aGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCa > 2:643272/1‑91 (MQ=255) gtgtGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCaa > 1:2064840/1‑91 (MQ=255) gtgtGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCaa > 1:1920383/1‑91 (MQ=255) gtgtGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCaa < 2:1802222/91‑1 (MQ=255) tgtgCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATACTTTCAAt > 1:1943526/1‑91 (MQ=255) gtgCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAAtt < 1:1062678/91‑1 (MQ=255) gtgCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAAtt < 1:3849380/91‑1 (MQ=255) tgCAAGTTGGGGTGGGACGACGAAATAAACTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAAttt > 2:3383264/1‑91 (MQ=255) gCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTg < 1:997148/91‑1 (MQ=255) gCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTg < 1:2580555/91‑1 (MQ=255) cAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTgg > 1:648553/1‑91 (MQ=255) cAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTgg < 1:562692/91‑1 (MQ=255) cAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTgg < 1:2849105/91‑1 (MQ=255) tGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAata > 2:2689603/1‑91 (MQ=255) tGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAata > 1:2443792/1‑91 (MQ=255) ggggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAatat < 2:1992523/91‑1 (MQ=255) | ATTAGCTCCTCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATAT > USA300TCH1516_ALE/954605‑954785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |